RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 AGPAT3Q9NRZ7 376 aa15.17■□□□□ 0.02
SCAF4-202ENST00000399804 MAP3K20Q9NYL2 800 aaKnown RBP15.17■□□□□ 0.02
SCAF4-202ENST00000399804 DSG3P32926 999 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 SLC8A3P57103 927 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 SNAPC2Q13487 334 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 ZNF394Q53GI3 561 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 LRRC45Q96CN5 670 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 ANKEF1Q9NU02 776 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 PLAGL2Q9UPG8 496 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 CCDC151A5D8V7 595 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 NCK2O43639 380 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 ZEB2O60315 1214 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 ATP1A1P05023 1023 aaKnown RBP15.16■□□□□ 0.02
SCAF4-202ENST00000399804 RNF149Q8NC42 400 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 SLC38A10Q9HBR0 1119 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 INTS13Q9NVM9 706 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 GPRC5DQ9NZD1 345 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 AGO2Q9UKV8 859 aaKnown RBP15.16■□□□□ 0.02
SCAF4-202ENST00000399804 NUP188Q5SRE5 1749 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 ADM5C9JUS6 153 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 CIITAP33076 1130 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 PPARDQ03181 441 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 SCARA5Q6ZMJ2 495 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 AGO4Q9HCK5 861 aaKnown RBP15.16■□□□□ 0.02
SCAF4-202ENST00000399804 MRFAP1Q9Y605 127 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 MYH2Q9UKX2 1941 aa15.16■□□□□ 0.02
SCAF4-202ENST00000399804 LTBP4Q8N2S1 1624 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 ANO9A1A5B4 782 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 COPB2P35606 906 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 ACOT2P49753 483 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 PGM5Q15124 567 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 FAM76AQ8TAV0 307 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 FAM81BQ96LP2 452 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 CCDC77Q9BR77 488 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 PFASO15067 1338 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 SSU72P8A0A1W2PR75 194 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 ATP2A1O14983 1001 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 CYP3A4P08684 503 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 MAPK4P31152 587 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 NFRKBQ6P4R8 1299 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 GPD1LQ8N335 351 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 RNF10Q8N5U6 811 aaKnown RBP15.15■□□□□ 0.02
SCAF4-202ENST00000399804 RPF1Q9H9Y2 349 aaKnown RBP15.15■□□□□ 0.02
SCAF4-202ENST00000399804 LRRC10BA6NIK2 292 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 ASB14A6NK59 587 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 PGRMC1O00264 195 aaKnown RBP15.15■□□□□ 0.02
SCAF4-202ENST00000399804 AKAP3O75969 853 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 SOX5P35711 763 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 VPS41P49754 854 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 SLC7A5Q01650 507 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 SNRNP35Q16560 246 aaKnown RBP15.15■□□□□ 0.02
SCAF4-202ENST00000399804 SLC18A3Q16572 532 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 FBXL13Q8NEE6 735 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 TRPM4Q8TD43 1214 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 IPO4Q8TEX9 1081 aaKnown RBP15.15■□□□□ 0.02
SCAF4-202ENST00000399804 SLC5A5Q92911 643 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 SHISA4Q96DD7 197 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 FHDC1Q9C0D6 1143 aaPredicted RBP15.15■□□□□ 0.02
SCAF4-202ENST00000399804 MORC2Q9Y6X9 1032 aaPredicted RBP15.15■□□□□ 0.02
SCAF4-202ENST00000399804 ITGB4P16144 1822 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 CYP3A7-CYP3A51PA0A087WV96 503 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 SLC25A27O95847 323 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 CYP3A7P24462 503 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 ZNF568Q3ZCX4 644 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 ZNF720Q7Z2F6 126 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 TEX2Q8IWB9 1127 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 ANKRD7Q92527 254 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 MKNK1Q9BUB5 465 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 EPB41L5Q9HCM4 733 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 RBAKQ9NYW8 714 aaPredicted RBP15.15■□□□□ 0.02
SCAF4-202ENST00000399804 RNF14Q9UBS8 474 aa15.15■□□□□ 0.02
SCAF4-202ENST00000399804 PACSIN2Q9UNF0 486 aaPredicted RBP15.15■□□□□ 0.02
SCAF4-202ENST00000399804 HEXIM1O94992 359 aaKnown RBP15.14■□□□□ 0.01
SCAF4-202ENST00000399804 PGK2P07205 417 aa15.14■□□□□ 0.01
SCAF4-202ENST00000399804 EPHX2P34913 555 aa15.14■□□□□ 0.01
SCAF4-202ENST00000399804 EMC2Q15006 297 aa15.14■□□□□ 0.01
SCAF4-202ENST00000399804 RPUSD2Q8IZ73 545 aaKnown RBP15.14■□□□□ 0.01
SCAF4-202ENST00000399804 FERMT1Q9BQL6 677 aa15.14■□□□□ 0.01
SCAF4-202ENST00000399804 RAB17Q9H0T7 212 aa15.14■□□□□ 0.01
SCAF4-202ENST00000399804 PPP2R3BQ9Y5P8 575 aa15.14■□□□□ 0.01
SCAF4-202ENST00000399804 A0A1W2PQJ5 194 aa15.14■□□□□ 0.01
SCAF4-202ENST00000399804 TMEM150BA6NC51 233 aa15.14■□□□□ 0.01
SCAF4-202ENST00000399804 PIK3CDO00329 1044 aa15.14■□□□□ 0.01
SCAF4-202ENST00000399804 CLUL1Q15846 466 aa15.14■□□□□ 0.01
SCAF4-202ENST00000399804 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.14■□□□□ 0.01
SCAF4-202ENST00000399804 ATRIPQ8WXE1 791 aa15.14■□□□□ 0.01
SCAF4-202ENST00000399804 MAGOHBQ96A72 148 aaKnown RBP15.14■□□□□ 0.01
SCAF4-202ENST00000399804 PURBQ96QR8 312 aaKnown RBP15.14■□□□□ 0.01
SCAF4-202ENST00000399804 WDR18Q9BV38 432 aa15.14■□□□□ 0.01
SCAF4-202ENST00000399804 MYH14Q7Z406 1995 aaKnown RBP15.14■□□□□ 0.01
SCAF4-202ENST00000399804 ZBTB22O15209 634 aa15.14■□□□□ 0.01
SCAF4-202ENST00000399804 POLR2BP30876 1174 aaKnown RBP15.14■□□□□ 0.01
SCAF4-202ENST00000399804 HPDP32754 393 aaPredicted RBP15.14■□□□□ 0.01
SCAF4-202ENST00000399804 GJB7Q6PEY0 223 aa15.14■□□□□ 0.01
SCAF4-202ENST00000399804 APEX2Q9UBZ4 518 aa15.14■□□□□ 0.01
SCAF4-202ENST00000399804 ABT1Q9ULW3 272 aaKnown RBP15.14■□□□□ 0.01
SCAF4-202ENST00000399804 MUTP22033 750 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 TBX2Q13207 712 aaPredicted RBP15.13■□□□□ 0.01
SCAF4-202ENST00000399804 KLHDC7AQ5VTJ3 777 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 KCNV1Q6PIU1 500 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms