RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 RNF225M0QZC1 329 aaPredicted RBP7.08□□□□□ -1.28
BDNF-203ENST00000395978 MUTP22033 750 aa7.08□□□□□ -1.28
BDNF-203ENST00000395978 PON1P27169 355 aa7.08□□□□□ -1.28
BDNF-203ENST00000395978 CAP2P40123 477 aa7.08□□□□□ -1.28
BDNF-203ENST00000395978 VPS41P49754 854 aa7.08□□□□□ -1.28
BDNF-203ENST00000395978 WDR59Q6PJI9 974 aa7.08□□□□□ -1.28
BDNF-203ENST00000395978 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.08□□□□□ -1.28
BDNF-203ENST00000395978 DNAJC19Q96DA6 116 aa7.08□□□□□ -1.28
BDNF-203ENST00000395978 CALR3Q96L12 384 aaKnown RBP7.08□□□□□ -1.28
BDNF-203ENST00000395978 FERMT1Q9BQL6 677 aa7.08□□□□□ -1.28
BDNF-203ENST00000395978 SH2D3AQ9BRG2 576 aa7.08□□□□□ -1.28
BDNF-203ENST00000395978 TIPINQ9BVW5 301 aa7.08□□□□□ -1.28
BDNF-203ENST00000395978 TAF1DQ9H5J8 278 aaPredicted RBP7.08□□□□□ -1.28
BDNF-203ENST00000395978 KIAA1586Q9HCI6 787 aa7.08□□□□□ -1.28
BDNF-203ENST00000395978 RBM12Q9NTZ6 932 aaKnown RBP7.08□□□□□ -1.28
BDNF-203ENST00000395978 SMARCAL1Q9NZC9 954 aa7.08□□□□□ -1.28
BDNF-203ENST00000395978 NAGPAQ9UK23 515 aa7.08□□□□□ -1.28
BDNF-203ENST00000395978 RAB21Q9UL25 225 aa7.08□□□□□ -1.28
BDNF-203ENST00000395978 SIK3Q9Y2K2 1263 aa7.08□□□□□ -1.28
BDNF-203ENST00000395978 FAM86B1E9PN63 330 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 PLSCR1O15162 318 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 AKAP3O75969 853 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 FAM86B2P0C5J1 330 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 CASP4P49662 377 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 RWDD2BP57060 319 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 LLGL1Q15334 1064 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 COBLL1Q53SF7 1204 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 MIIPQ5JXC2 388 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 SLFN12LQ6IEE8 588 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 SWSAP1Q6NVH7 229 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 GADL1Q6ZQY3 521 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 RPUSD2Q8IZ73 545 aaKnown RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 METTL13Q8N6R0 699 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 AGBL3Q8NEM8 1001 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 UHMK1Q8TAS1 419 aaKnown RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 MAK16Q9BXY0 300 aaKnown RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 SLITRK6Q9H5Y7 841 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 RPAP3Q9H6T3 665 aaPredicted RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 KCNMB3Q9NPA1 279 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 AGPAT3Q9NRZ7 376 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 PRDM4Q9UKN5 801 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 TRPC6Q9Y210 931 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 TRAF3IP3Q9Y228 551 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 UBE4BO95155 1302 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 HMGB1P1B2RPK0 211 aaPredicted RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 SART1O43290 800 aaKnown RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 TMEM191BP0C7N4 346 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 SLURP2P0DP57 97 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 PLS3P13797 630 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 ATP2A2P16615 1042 aaKnown RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 NR1D1P20393 614 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 IBSPP21815 317 aaPredicted RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 MAN1A1P33908 653 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 SGO2Q562F6 1265 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 LRRC55Q6ZSA7 311 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 SPATS2Q86XZ4 545 aaKnown RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 KSR1Q8IVT5 923 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 GLIS3Q8NEA6 775 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 SHISA4Q96DD7 197 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 AGPAT1Q99943 283 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 ATP6V0A4Q9HBG4 840 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 OLFML3Q9NRN5 406 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 HOMER3Q9NSC5 361 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 ZNF446Q9NWS9 450 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 RAB20Q9NX57 234 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 CLEC11AQ9Y240 323 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 PTPN22Q9Y2R2 807 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 NOC2LQ9Y3T9 749 aaKnown RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 IVNS1ABPQ9Y6Y0 642 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 COL1A1P02452 1464 aaPredicted RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 CYP3A7-CYP3A51PA0A087WV96 503 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 MEIS2O14770 477 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 ADAMTS3O15072 1205 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 ZRANB2O95218 330 aaKnown RBP eCLIP7.07□□□□□ -1.28
BDNF-203ENST00000395978 TNNC2P02585 160 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 TFRCP02786 760 aaKnown RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 ARP10275 920 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 CYP3A7P24462 503 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 BAATQ14032 418 aaPredicted RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 STXBP2Q15833 593 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 ZNF746Q6NUN9 644 aaPredicted RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 PPP1R2P3Q6NXS1 205 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 APTXQ7Z2E3 356 aaKnown RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 APBB1IPQ7Z5R6 666 aaPredicted RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.07□□□□□ -1.28
BDNF-203ENST00000395978 SAAL1Q96ER3 474 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 JPH2Q9BR39 696 aaPredicted RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 MRPL47Q9HD33 250 aaKnown RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 HSPBP1Q9NZL4 362 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 HPCAL4Q9UM19 191 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 PLAAQ9Y263 795 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 RRP15Q9Y3B9 282 aaKnown RBP7.07□□□□□ -1.28
BDNF-203ENST00000395978 PFASO15067 1338 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 SYNGAP1Q96PV0 1343 aa7.07□□□□□ -1.28
BDNF-203ENST00000395978 PKD1L3Q7Z443 1732 aa7.06□□□□□ -1.28
BDNF-203ENST00000395978 PODXLO00592 558 aa7.06□□□□□ -1.28
BDNF-203ENST00000395978 ECEL1O95672 775 aa7.06□□□□□ -1.28
BDNF-203ENST00000395978 IFNB1P01574 187 aa7.06□□□□□ -1.28
BDNF-203ENST00000395978 ICAM1P05362 532 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms