RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 CFAP221Q4G0U5 840 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 ZDHHC14Q8IZN3 488 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 TEKT3Q9BXF9 490 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 INTUQ9ULD6 942 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 PPP1R9AQ9ULJ8 1098 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 NFS1Q9Y697 457 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 ANK1P16157 1881 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 MYH9P35579 1960 aaKnown RBP16.77■□□□□ 0.28
CPSF7-202ENST00000394888 FAM13AO94988 1023 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 ADRB2P07550 413 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 CAPN2P17655 700 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 MCM3P25205 808 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 UAP1Q16222 522 aaPredicted RBP16.77■□□□□ 0.28
CPSF7-202ENST00000394888 GLYCTKQ8IVS8 523 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 TAAR1Q96RJ0 339 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 ST6GALNAC4Q9H4F1 302 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 VEZTQ9HBM0 779 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 MYOZ2Q9NPC6 264 aa16.77■□□□□ 0.28
CPSF7-202ENST00000394888 DICER1Q9UPY3 1922 aaKnown RBP16.77■□□□□ 0.27
CPSF7-202ENST00000394888 EIF3JO75822 258 aaKnown RBP16.77■□□□□ 0.27
CPSF7-202ENST00000394888 CHRNB2P17787 502 aa16.77■□□□□ 0.27
CPSF7-202ENST00000394888 NCKAP1LP55160 1127 aa16.77■□□□□ 0.27
CPSF7-202ENST00000394888 GTF2BQ00403 316 aa16.77■□□□□ 0.27
CPSF7-202ENST00000394888 PPP2R5AQ15172 486 aa16.77■□□□□ 0.27
CPSF7-202ENST00000394888 ODR4Q5SWX8 454 aa16.77■□□□□ 0.27
CPSF7-202ENST00000394888 PADI6Q6TGC4 694 aa16.77■□□□□ 0.27
CPSF7-202ENST00000394888 SND1Q7KZF4 910 aaKnown RBP eCLIP16.77■□□□□ 0.27
CPSF7-202ENST00000394888 TXLNBQ8N3L3 684 aa16.77■□□□□ 0.27
CPSF7-202ENST00000394888 LARGE2Q8N3Y3 721 aa16.77■□□□□ 0.27
CPSF7-202ENST00000394888 SLC20A1Q8WUM9 679 aa16.77■□□□□ 0.27
CPSF7-202ENST00000394888 HOOK2Q96ED9 719 aa16.77■□□□□ 0.27
CPSF7-202ENST00000394888 ZIM3Q96PE6 472 aa16.77■□□□□ 0.27
CPSF7-202ENST00000394888 KIAA1683Q9H0B3 1180 aa16.77■□□□□ 0.27
CPSF7-202ENST00000394888 GPRC5CQ9NQ84 441 aa16.77■□□□□ 0.27
CPSF7-202ENST00000394888 DNAJC12Q9UKB3 198 aa16.77■□□□□ 0.27
CPSF7-202ENST00000394888 DDX39AO00148 427 aaKnown RBP16.76■□□□□ 0.27
CPSF7-202ENST00000394888 BACH1O14867 736 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 RPL13P26373 211 aaKnown RBP16.76■□□□□ 0.27
CPSF7-202ENST00000394888 ACTN2P35609 894 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 APEX2Q9UBZ4 518 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 LMAN1P49257 510 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 CYP2J2P51589 502 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 EPHB4P54760 987 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 NPEPPSP55786 919 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 FAM178BQ8IXR5 827 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 KAT5Q92993 513 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 KRT12Q99456 494 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 VPS33BQ9H267 617 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 CCPG1Q9ULG6 757 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 NFU1Q9UMS0 254 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 NFKBIEO00221 500 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 FOXN3O00409 490 aaPredicted RBP16.76■□□□□ 0.27
CPSF7-202ENST00000394888 FLT3P36888 993 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 NNTQ13423 1086 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 BSNDQ8WZ55 320 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 CCDC102AQ96A19 550 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 ADGRA3Q8IWK6 1321 aa16.76■□□□□ 0.27
CPSF7-202ENST00000394888 MAPTP10636 758 aaKnown RBP16.75■□□□□ 0.27
CPSF7-202ENST00000394888 RXRBP28702 533 aa16.75■□□□□ 0.27
CPSF7-202ENST00000394888 TCEAL1Q15170 157 aa16.75■□□□□ 0.27
CPSF7-202ENST00000394888 ZSCAN26Q16670 478 aa16.75■□□□□ 0.27
CPSF7-202ENST00000394888 C8orf74Q6P047 294 aa16.75■□□□□ 0.27
CPSF7-202ENST00000394888 EMBQ6PCB8 327 aa16.75■□□□□ 0.27
CPSF7-202ENST00000394888 PDLIM7Q9NR12 457 aa16.75■□□□□ 0.27
CPSF7-202ENST00000394888 SUCLA2Q9P2R7 463 aaPredicted RBP16.75■□□□□ 0.27
CPSF7-202ENST00000394888 NOCTQ9UK39 431 aaKnown RBP16.75■□□□□ 0.27
CPSF7-202ENST00000394888 BUB1BO60566 1050 aaPredicted RBP16.75■□□□□ 0.27
CPSF7-202ENST00000394888 HEXIM1O94992 359 aaKnown RBP16.75■□□□□ 0.27
CPSF7-202ENST00000394888 TNNT3P45378 269 aaPredicted RBP16.75■□□□□ 0.27
CPSF7-202ENST00000394888 MYBPC2Q14324 1141 aa16.75■□□□□ 0.27
CPSF7-202ENST00000394888 RASA3Q14644 834 aa16.75■□□□□ 0.27
CPSF7-202ENST00000394888 MAP9Q49MG5 647 aa16.75■□□□□ 0.27
CPSF7-202ENST00000394888 ATP8B4Q8TF62 1192 aa16.75■□□□□ 0.27
CPSF7-202ENST00000394888 PCDHB18PQ96TA0 734 aa16.75■□□□□ 0.27
CPSF7-202ENST00000394888 RAVER2Q9HCJ3 691 aaKnown RBP16.75■□□□□ 0.27
CPSF7-202ENST00000394888 ASNSP08243 561 aa16.75■□□□□ 0.27
CPSF7-202ENST00000394888 RNASE9P60153 205 aaKnown RBP16.75■□□□□ 0.27
CPSF7-202ENST00000394888 TCERG1LQ5VWI1 586 aa16.75■□□□□ 0.27
CPSF7-202ENST00000394888 SEMA4DQ92854 862 aa16.75■□□□□ 0.27
CPSF7-202ENST00000394888 EPB41L5Q9HCM4 733 aa16.75■□□□□ 0.27
CPSF7-202ENST00000394888 VCAM1P19320 739 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 DNA2P51530 1060 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 RPS6P62753 249 aaKnown RBP16.74■□□□□ 0.27
CPSF7-202ENST00000394888 EMC10Q5UCC4 262 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 ANO5Q75V66 913 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 GOLGA5Q8TBA6 731 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 SLC35G2Q8TBE7 412 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 KREMEN1Q96MU8 473 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 ERVK-5Q9HDB9 667 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 PKD2L1Q9P0L9 805 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 TTC7AQ9ULT0 858 aaPredicted RBP16.74■□□□□ 0.27
CPSF7-202ENST00000394888 ANKRD63C9JTQ0 380 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 WDR46O15213 610 aaKnown RBP16.74■□□□□ 0.27
CPSF7-202ENST00000394888 TAS1R3Q7RTX0 852 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 CPNE8Q86YQ8 564 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 SPAG5Q96R06 1193 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 TXLNGYQ9BZA5 131 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 THAP2Q9H0W7 228 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 ADAMTS5Q9UNA0 930 aa16.74■□□□□ 0.27
CPSF7-202ENST00000394888 NOC2LQ9Y3T9 749 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms