RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 LRRC10BA6NIK2 292 aa29.48■■■□□ 2.31
MSX1-201ENST00000382723 N4BP3O15049 544 aa29.48■■■□□ 2.31
MSX1-201ENST00000382723 EXOC8Q8IYI6 725 aa29.48■■■□□ 2.31
MSX1-201ENST00000382723 TRIM44Q96DX7 344 aaPredicted RBP29.48■■■□□ 2.31
MSX1-201ENST00000382723 TSKSQ9UJT2 592 aa29.48■■■□□ 2.31
MSX1-201ENST00000382723 CETN3O15182 167 aa29.47■■■□□ 2.31
MSX1-201ENST00000382723 TEX33O43247 280 aa29.47■■■□□ 2.31
MSX1-201ENST00000382723 ADCY3O60266 1144 aa29.47■■■□□ 2.31
MSX1-201ENST00000382723 NR3C1P04150 777 aa29.47■■■□□ 2.31
MSX1-201ENST00000382723 PRKCSHP14314 528 aaPredicted RBP29.47■■■□□ 2.31
MSX1-201ENST00000382723 BRDTQ58F21 947 aaPredicted RBP29.47■■■□□ 2.31
MSX1-201ENST00000382723 HS2ST1Q7LGA3 356 aa29.47■■■□□ 2.31
MSX1-201ENST00000382723 TMC6Q7Z403 805 aa29.47■■■□□ 2.31
MSX1-201ENST00000382723 METTL13Q8N6R0 699 aa29.47■■■□□ 2.31
MSX1-201ENST00000382723 RAET1EQ8TD07 263 aa29.47■■■□□ 2.31
MSX1-201ENST00000382723 CEP63Q96MT8 703 aa29.47■■■□□ 2.31
MSX1-201ENST00000382723 TUBGCP2Q9BSJ2 902 aa29.47■■■□□ 2.31
MSX1-201ENST00000382723 TMEM206Q9H813 350 aa29.47■■■□□ 2.31
MSX1-201ENST00000382723 LRRIQ4A6NIV6 560 aa29.47■■■□□ 2.31
MSX1-201ENST00000382723 PES1O00541 588 aaKnown RBP29.47■■■□□ 2.31
MSX1-201ENST00000382723 DUSP11O75319 330 aaKnown RBP29.47■■■□□ 2.31
MSX1-201ENST00000382723 MYL3P08590 195 aa29.47■■■□□ 2.31
MSX1-201ENST00000382723 MKRN4PQ13434 485 aaPredicted RBP29.47■■■□□ 2.31
MSX1-201ENST00000382723 PRPF31Q8WWY3 499 aaKnown RBP29.47■■■□□ 2.31
MSX1-201ENST00000382723 RTN4Q9NQC3 1192 aaKnown RBP29.47■■■□□ 2.31
MSX1-201ENST00000382723 TBX20Q9UMR3 447 aa29.47■■■□□ 2.31
MSX1-201ENST00000382723 IGKV6-21A0A0C4DH24 114 aa29.46■■■□□ 2.31
MSX1-201ENST00000382723 PRKAR2AP13861 404 aaKnown RBP29.46■■■□□ 2.31
MSX1-201ENST00000382723 PPP2R5AQ15172 486 aa29.46■■■□□ 2.31
MSX1-201ENST00000382723 FSCN1Q16658 493 aaKnown RBP29.46■■■□□ 2.31
MSX1-201ENST00000382723 IER5Q5VY09 327 aa29.46■■■□□ 2.31
MSX1-201ENST00000382723 FILIP1Q7Z7B0 1213 aa29.46■■■□□ 2.31
MSX1-201ENST00000382723 ZC3H3Q8IXZ2 948 aaKnown RBP29.46■■■□□ 2.31
MSX1-201ENST00000382723 TCP11Q8WWU5 503 aa29.46■■■□□ 2.31
MSX1-201ENST00000382723 JPH2Q9BR39 696 aaPredicted RBP29.46■■■□□ 2.31
MSX1-201ENST00000382723 AGPAT3Q9NRZ7 376 aa29.46■■■□□ 2.31
MSX1-201ENST00000382723 GAS2O43903 313 aaKnown RBP29.45■■■□□ 2.31
MSX1-201ENST00000382723 C22orf31O95567 290 aa29.45■■■□□ 2.31
MSX1-201ENST00000382723 NAMPTP43490 491 aa29.45■■■□□ 2.31
MSX1-201ENST00000382723 PPFIA1Q13136 1202 aa29.45■■■□□ 2.31
MSX1-201ENST00000382723 CCDC40Q4G0X9 1142 aa29.45■■■□□ 2.31
MSX1-201ENST00000382723 EFCAB12Q6NXP0 572 aa29.45■■■□□ 2.31
MSX1-201ENST00000382723 GOLGA6L6A8MZA4 724 aa29.45■■■□□ 2.3
MSX1-201ENST00000382723 SEPT4O43236 478 aa29.45■■■□□ 2.3
MSX1-201ENST00000382723 C6orf222P0C671 652 aaPredicted RBP29.45■■■□□ 2.3
MSX1-201ENST00000382723 RPL13P26373 211 aaKnown RBP29.45■■■□□ 2.3
MSX1-201ENST00000382723 KLRC1P26715 233 aa29.45■■■□□ 2.3
MSX1-201ENST00000382723 CCND3P30281 292 aaPredicted RBP29.45■■■□□ 2.3
MSX1-201ENST00000382723 DEPTORQ8TB45 409 aa29.45■■■□□ 2.3
MSX1-201ENST00000382723 PPP1R13LQ8WUF5 828 aa29.45■■■□□ 2.3
MSX1-201ENST00000382723 KCNG1Q9UIX4 513 aa29.45■■■□□ 2.3
MSX1-201ENST00000382723 TISP43B9A030 160 aa29.44■■■□□ 2.3
MSX1-201ENST00000382723 GNRH1P01148 92 aa29.44■■■□□ 2.3
MSX1-201ENST00000382723 CLCN3P51790 818 aa29.44■■■□□ 2.3
MSX1-201ENST00000382723 CAPSQ13938 189 aa29.44■■■□□ 2.3
MSX1-201ENST00000382723 VSTM4Q8IW00 320 aa29.44■■■□□ 2.3
MSX1-201ENST00000382723 PSPC1Q8WXF1 523 aaKnown RBP29.44■■■□□ 2.3
MSX1-201ENST00000382723 KAT2BQ92831 832 aa29.44■■■□□ 2.3
MSX1-201ENST00000382723 ARHGAP28Q9P2N2 729 aa29.44■■■□□ 2.3
MSX1-201ENST00000382723 SUCLA2Q9P2R7 463 aaPredicted RBP29.44■■■□□ 2.3
MSX1-201ENST00000382723 MYADML2A6NDP7 307 aa29.43■■■□□ 2.3
MSX1-201ENST00000382723 F2P00734 622 aa29.43■■■□□ 2.3
MSX1-201ENST00000382723 TPM2P07951 284 aa29.43■■■□□ 2.3
MSX1-201ENST00000382723 GRIK4Q16099 956 aa29.43■■■□□ 2.3
MSX1-201ENST00000382723 KIAA0753Q2KHM9 967 aa29.43■■■□□ 2.3
MSX1-201ENST00000382723 RETREG2Q8NC44 543 aa29.43■■■□□ 2.3
MSX1-201ENST00000382723 GOLGA5Q8TBA6 731 aa29.43■■■□□ 2.3
MSX1-201ENST00000382723 HVCN1Q96D96 273 aa29.43■■■□□ 2.3
MSX1-201ENST00000382723 NOC4LQ9BVI4 516 aaKnown RBP29.43■■■□□ 2.3
MSX1-201ENST00000382723 EXOC7Q9UPT5 735 aa29.43■■■□□ 2.3
MSX1-201ENST00000382723 COL1A2P08123 1366 aa29.43■■■□□ 2.3
MSX1-201ENST00000382723 CYP2J2P51589 502 aa29.43■■■□□ 2.3
MSX1-201ENST00000382723 LAMTOR4Q0VGL1 99 aa29.43■■■□□ 2.3
MSX1-201ENST00000382723 CEP135Q66GS9 1140 aa29.43■■■□□ 2.3
MSX1-201ENST00000382723 MAP4K3Q8IVH8 894 aa29.43■■■□□ 2.3
MSX1-201ENST00000382723 H0YCG3 227 aa29.42■■■□□ 2.3
MSX1-201ENST00000382723 GNA14O95837 355 aa29.42■■■□□ 2.3
MSX1-201ENST00000382723 PGK1P00558 417 aa29.42■■■□□ 2.3
MSX1-201ENST00000382723 HMGCRP04035 888 aa29.42■■■□□ 2.3
MSX1-201ENST00000382723 GJB1P08034 283 aa29.42■■■□□ 2.3
MSX1-201ENST00000382723 RARBP10826 455 aa29.42■■■□□ 2.3
MSX1-201ENST00000382723 DNM2P50570 870 aa29.42■■■□□ 2.3
MSX1-201ENST00000382723 CCDC186Q7Z3E2 898 aa29.42■■■□□ 2.3
MSX1-201ENST00000382723 RHPN2Q8IUC4 686 aa29.42■■■□□ 2.3
MSX1-201ENST00000382723 BEGAINQ9BUH8 593 aa29.42■■■□□ 2.3
MSX1-201ENST00000382723 CASP8AP2Q9UKL3 1982 aa29.42■■■□□ 2.3
MSX1-201ENST00000382723 SRGAP2CP0DJJ0 459 aa29.41■■■□□ 2.3
MSX1-201ENST00000382723 UBXN1Q04323 297 aa29.41■■■□□ 2.3
MSX1-201ENST00000382723 MFSD10Q14728 455 aa29.41■■■□□ 2.3
MSX1-201ENST00000382723 ARHGEF6Q15052 776 aa29.41■■■□□ 2.3
MSX1-201ENST00000382723 TAS1R3Q7RTX0 852 aa29.41■■■□□ 2.3
MSX1-201ENST00000382723 SETD4Q9NVD3 440 aa29.41■■■□□ 2.3
MSX1-201ENST00000382723 LGALS16A8MUM7 142 aa29.41■■■□□ 2.3
MSX1-201ENST00000382723 MAGEB2O15479 319 aa29.41■■■□□ 2.3
MSX1-201ENST00000382723 CASP4P49662 377 aa29.41■■■□□ 2.3
MSX1-201ENST00000382723 GJA9P57773 515 aa29.41■■■□□ 2.3
MSX1-201ENST00000382723 MXD4Q14582 209 aaPredicted RBP29.41■■■□□ 2.3
MSX1-201ENST00000382723 GNASQ5JWF2 1037 aa29.41■■■□□ 2.3
MSX1-201ENST00000382723 MTHFD1LQ6UB35 978 aa29.41■■■□□ 2.3
MSX1-201ENST00000382723 AKAP3O75969 853 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms