RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 ARHGEF10LQ9HCE6 1279 aa11.88□□□□□ -0.51
BEST1-201ENST00000378043 TISP43B9A030 160 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 TTI1O43156 1089 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 MUTP22033 750 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 GUCY2CP25092 1073 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 LSP1P33241 339 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 DLG4P78352 724 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 PPP2R5AQ15172 486 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 STYK1Q6J9G0 422 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 TEX2Q8IWB9 1127 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 CDAN1Q8IWY9 1227 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 RDH13Q8NBN7 331 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 TMBIM4Q9HC24 238 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 FBXO28Q9NVF7 368 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 KCND2Q9NZV8 630 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 TTC7AQ9ULT0 858 aaPredicted RBP11.87□□□□□ -0.51
BEST1-201ENST00000378043 COG5Q9UP83 839 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 BCS1LQ9Y276 419 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 FRMD4BQ9Y2L6 1034 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 SAMM50Q9Y512 469 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 FAM169AQ9Y6X4 670 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 CLRN2A0PK11 232 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 H0YIN7 160 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 FOXN3O00409 490 aaPredicted RBP11.87□□□□□ -0.51
BEST1-201ENST00000378043 IPO5O00410 1097 aaKnown RBP11.87□□□□□ -0.51
BEST1-201ENST00000378043 ZEB2O60315 1214 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 HIP1RO75146 1068 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 ITGB5P18084 799 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 BFSP1Q12934 665 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 PLS1Q14651 629 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 MAATS1Q7Z4T9 603 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 PACS2Q86VP3 889 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 SLC9A9Q8IVB4 645 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 HOOK2Q96ED9 719 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 WDR11Q9BZH6 1224 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 THAP2Q9H0W7 228 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 SLITRK6Q9H5Y7 841 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 AMFRQ9UKV5 643 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 ZBTB21Q9ULJ3 1066 aa11.87□□□□□ -0.51
BEST1-201ENST00000378043 PSME4Q14997 1843 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 A6NNZ2 444 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 HMGB1P1B2RPK0 211 aaPredicted RBP11.86□□□□□ -0.51
BEST1-201ENST00000378043 FGGP02679 453 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 HSPA1LP34931 641 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 MYL7Q01449 175 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 ZNF844Q08AG5 666 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 ZYXQ15942 572 aaKnown RBP11.86□□□□□ -0.51
BEST1-201ENST00000378043 ARHGAP44Q17R89 818 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 TUBB8Q3ZCM7 444 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 LRIG3Q6UXM1 1119 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 GLIS2Q9BZE0 524 aaPredicted RBP11.86□□□□□ -0.51
BEST1-201ENST00000378043 GOPCQ9HD26 462 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 SPDYE2BA6NHP3 402 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 EXOC3O60645 756 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 SPDYE6P0CI01 402 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 TRAF1Q13077 416 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 KIF22Q14807 665 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 NAA35Q5VZE5 725 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 LDHDQ86WU2 507 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 EFCAB13Q8IY85 973 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 ALG3Q92685 438 aa11.86□□□□□ -0.51
BEST1-201ENST00000378043 CNTNAP1P78357 1384 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 MYO1FO00160 1098 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 NDUFAB1O14561 156 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 PPP3CAQ08209 521 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 SAMD1Q6SPF0 538 aaPredicted RBP11.85□□□□□ -0.51
BEST1-201ENST00000378043 STXBP4Q6ZWJ1 553 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 MAEAQ7L5Y9 396 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 ZSWIM2Q8NEG5 633 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 CHURC1Q8WUH1 139 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 SLC20A1Q8WUM9 679 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 CTNNBL1Q8WYA6 563 aaPredicted RBP11.85□□□□□ -0.51
BEST1-201ENST00000378043 TEKT3Q9BXF9 490 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 VCPKMTQ9H867 229 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 LRRC4CQ9HCJ2 640 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 ERVK-5Q9HDB9 667 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 COL20A1Q9P218 1284 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 MRPL11Q9Y3B7 192 aaKnown RBP11.85□□□□□ -0.51
BEST1-201ENST00000378043 DDX39AO00148 427 aaKnown RBP11.85□□□□□ -0.51
BEST1-201ENST00000378043 PLSCR1O15162 318 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 COPB2P35606 906 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 MDH1P40925 334 aaKnown RBP11.85□□□□□ -0.51
BEST1-201ENST00000378043 C1orf220Q5T0J3 134 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 PADI6Q6TGC4 694 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 TMC3Q7Z5M5 1100 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 ATP8B4Q8TF62 1192 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 LRRC45Q96CN5 670 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 MXRA8Q9BRK3 442 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 TRIM51Q9BSJ1 452 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 EPN3Q9H201 632 aa11.85□□□□□ -0.51
BEST1-201ENST00000378043 ARHGEF35A5YM69 484 aa11.84□□□□□ -0.51
BEST1-201ENST00000378043 ANKRD62A6NC57 917 aa11.84□□□□□ -0.51
BEST1-201ENST00000378043 DHX15O43143 795 aaKnown RBP11.84□□□□□ -0.51
BEST1-201ENST00000378043 TNFAIP3P21580 790 aa11.84□□□□□ -0.51
BEST1-201ENST00000378043 CTNNA1P35221 906 aaKnown RBP11.84□□□□□ -0.51
BEST1-201ENST00000378043 SEC24CP53992 1094 aa11.84□□□□□ -0.51
BEST1-201ENST00000378043 SETQ01105 290 aaPredicted RBP11.84□□□□□ -0.51
BEST1-201ENST00000378043 ZNF211Q13398 564 aaPredicted RBP11.84□□□□□ -0.51
BEST1-201ENST00000378043 PTGISQ16647 500 aa11.84□□□□□ -0.51
BEST1-201ENST00000378043 ADAT2Q7Z6V5 191 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms