RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 ORC2Q13416 577 aaPredicted RBP19.16■□□□□ 0.66
USP11-202ENST00000377078 CTTNQ14247 550 aaKnown RBP19.16■□□□□ 0.66
USP11-202ENST00000377078 LEXMQ3ZCV2 418 aa19.16■□□□□ 0.66
USP11-202ENST00000377078 CATSPER4Q7RTX7 472 aa19.16■□□□□ 0.66
USP11-202ENST00000377078 ECHDC2Q86YB7 292 aa19.16■□□□□ 0.66
USP11-202ENST00000377078 RSPH1Q8WYR4 309 aa19.16■□□□□ 0.66
USP11-202ENST00000377078 PABPC5Q96DU9 382 aaKnown RBP19.16■□□□□ 0.66
USP11-202ENST00000377078 EIF2AK1Q9BQI3 630 aaKnown RBP19.16■□□□□ 0.66
USP11-202ENST00000377078 FAM50BQ9Y247 325 aa19.16■□□□□ 0.66
USP11-202ENST00000377078 NCOR1O75376 2440 aa19.16■□□□□ 0.66
USP11-202ENST00000377078 A0A0U1RQF3 1178 aa19.15■□□□□ 0.66
USP11-202ENST00000377078 ASAP2O43150 1006 aa19.15■□□□□ 0.66
USP11-202ENST00000377078 CSPG5O95196 566 aa19.15■□□□□ 0.66
USP11-202ENST00000377078 ITGB1P05556 798 aa19.15■□□□□ 0.66
USP11-202ENST00000377078 FGFR4P22455 802 aa19.15■□□□□ 0.66
USP11-202ENST00000377078 MCM7P33993 719 aa19.15■□□□□ 0.66
USP11-202ENST00000377078 UBE3AQ05086 875 aa19.15■□□□□ 0.66
USP11-202ENST00000377078 EMC2Q15006 297 aa19.15■□□□□ 0.66
USP11-202ENST00000377078 TWF2Q6IBS0 349 aaKnown RBP19.15■□□□□ 0.66
USP11-202ENST00000377078 LRRC43Q8N309 656 aa19.15■□□□□ 0.66
USP11-202ENST00000377078 FBXO18Q8NFZ0 1043 aa19.15■□□□□ 0.66
USP11-202ENST00000377078 KIF2CQ99661 725 aa19.15■□□□□ 0.66
USP11-202ENST00000377078 WRAP73Q9P2S5 460 aaPredicted RBP19.15■□□□□ 0.66
USP11-202ENST00000377078 NOL7Q9UMY1 257 aaKnown RBP19.15■□□□□ 0.66
USP11-202ENST00000377078 PIN4Q9Y237 131 aaKnown RBP19.15■□□□□ 0.66
USP11-202ENST00000377078 BRWD1Q9NSI6 2320 aa19.15■□□□□ 0.66
USP11-202ENST00000377078 CSDE1O75534 798 aaKnown RBP19.14■□□□□ 0.65
USP11-202ENST00000377078 SLITRK3O94933 977 aa19.14■□□□□ 0.65
USP11-202ENST00000377078 LYPLA2O95372 231 aa19.14■□□□□ 0.65
USP11-202ENST00000377078 KSR1Q8IVT5 923 aa19.14■□□□□ 0.65
USP11-202ENST00000377078 THNSL1Q8IYQ7 743 aa19.14■□□□□ 0.65
USP11-202ENST00000377078 SPPL3Q8TCT6 385 aa19.14■□□□□ 0.65
USP11-202ENST00000377078 POF1BQ8WVV4 589 aa19.14■□□□□ 0.65
USP11-202ENST00000377078 PRPF31Q8WWY3 499 aaKnown RBP19.14■□□□□ 0.65
USP11-202ENST00000377078 MTMR9Q96QG7 549 aa19.14■□□□□ 0.65
USP11-202ENST00000377078 MTRQ99707 1265 aa19.14■□□□□ 0.65
USP11-202ENST00000377078 MRPL9Q9BYD2 267 aaKnown RBP19.14■□□□□ 0.65
USP11-202ENST00000377078 ANKEF1Q9NU02 776 aa19.14■□□□□ 0.65
USP11-202ENST00000377078 TYW1Q9NV66 732 aaKnown RBP19.14■□□□□ 0.65
USP11-202ENST00000377078 CLDND1Q9NY35 253 aa19.14■□□□□ 0.65
USP11-202ENST00000377078 SRGAP2CP0DJJ0 459 aa19.13■□□□□ 0.65
USP11-202ENST00000377078 PPM1AP35813 382 aa19.13■□□□□ 0.65
USP11-202ENST00000377078 PHKA2P46019 1235 aa19.13■□□□□ 0.65
USP11-202ENST00000377078 RAB27AP51159 221 aa19.13■□□□□ 0.65
USP11-202ENST00000377078 MXD4Q14582 209 aaPredicted RBP19.13■□□□□ 0.65
USP11-202ENST00000377078 SRGAP1Q7Z6B7 1085 aa19.13■□□□□ 0.65
USP11-202ENST00000377078 ERMNQ8TAM6 284 aa19.13■□□□□ 0.65
USP11-202ENST00000377078 TMEM143Q96AN5 459 aa19.13■□□□□ 0.65
USP11-202ENST00000377078 HSD17B14Q9BPX1 270 aa19.13■□□□□ 0.65
USP11-202ENST00000377078 TRAIPQ9BWF2 469 aa19.13■□□□□ 0.65
USP11-202ENST00000377078 PUF60Q9UHX1 559 aaKnown RBP19.13■□□□□ 0.65
USP11-202ENST00000377078 TCF20Q9UGU0 1960 aaKnown RBP19.12■□□□□ 0.65
USP11-202ENST00000377078 FNDC1Q4ZHG4 1894 aaPredicted RBP19.12■□□□□ 0.65
USP11-202ENST00000377078 FSD2A1L4K1 749 aa19.12■□□□□ 0.65
USP11-202ENST00000377078 DGAT1O75907 488 aa19.12■□□□□ 0.65
USP11-202ENST00000377078 FGF18O76093 207 aa19.12■□□□□ 0.65
USP11-202ENST00000377078 TRAPPC10P48553 1259 aa19.12■□□□□ 0.65
USP11-202ENST00000377078 NCBP1Q09161 790 aaKnown RBP19.12■□□□□ 0.65
USP11-202ENST00000377078 LAMTOR4Q0VGL1 99 aa19.12■□□□□ 0.65
USP11-202ENST00000377078 TFDP1Q14186 410 aa19.12■□□□□ 0.65
USP11-202ENST00000377078 COL19A1Q14993 1142 aa19.12■□□□□ 0.65
USP11-202ENST00000377078 PTCRAQ6ISU1 281 aaPredicted RBP19.12■□□□□ 0.65
USP11-202ENST00000377078 PDE12Q6L8Q7 609 aaKnown RBP19.12■□□□□ 0.65
USP11-202ENST00000377078 NOSTRINQ8IVI9 506 aa19.12■□□□□ 0.65
USP11-202ENST00000377078 ZNF579Q8NAF0 562 aaKnown RBP19.12■□□□□ 0.65
USP11-202ENST00000377078 COLGALT1Q8NBJ5 622 aa19.12■□□□□ 0.65
USP11-202ENST00000377078 MICAL1Q8TDZ2 1067 aa19.12■□□□□ 0.65
USP11-202ENST00000377078 ZNF558Q96NG5 402 aa19.12■□□□□ 0.65
USP11-202ENST00000377078 NECAB3Q96P71 396 aaPredicted RBP19.12■□□□□ 0.65
USP11-202ENST00000377078 CASD1Q96PB1 797 aa19.12■□□□□ 0.65
USP11-202ENST00000377078 BMP2KQ9NSY1 1161 aaPredicted RBP19.12■□□□□ 0.65
USP11-202ENST00000377078 BDP1A6H8Y1 2624 aa19.12■□□□□ 0.65
USP11-202ENST00000377078 CARNS1A5YM72 827 aa19.11■□□□□ 0.65
USP11-202ENST00000377078 H3BQ06 376 aaPredicted RBP19.11■□□□□ 0.65
USP11-202ENST00000377078 OR52Z1P0C646 297 aa19.11■□□□□ 0.65
USP11-202ENST00000377078 XRCC6P12956 609 aaKnown RBP eCLIP19.11■□□□□ 0.65
USP11-202ENST00000377078 KRT17Q04695 432 aa19.11■□□□□ 0.65
USP11-202ENST00000377078 HYAL1Q12794 435 aa19.11■□□□□ 0.65
USP11-202ENST00000377078 PCBP1Q15365 356 aaKnown RBP eCLIP19.11■□□□□ 0.65
USP11-202ENST00000377078 TTC38Q5R3I4 469 aa19.11■□□□□ 0.65
USP11-202ENST00000377078 FERMT3Q86UX7 667 aa19.11■□□□□ 0.65
USP11-202ENST00000377078 RNF149Q8NC42 400 aa19.11■□□□□ 0.65
USP11-202ENST00000377078 PGBD4Q96DM1 585 aa19.11■□□□□ 0.65
USP11-202ENST00000377078 IGFLR1Q9H665 355 aa19.11■□□□□ 0.65
USP11-202ENST00000377078 IFT122Q9HBG6 1241 aa19.11■□□□□ 0.65
USP11-202ENST00000377078 TLR9Q9NR96 1032 aa19.11■□□□□ 0.65
USP11-202ENST00000377078 KIAA1671Q9BY89 1806 aa19.11■□□□□ 0.65
USP11-202ENST00000377078 POTEMA6NI47 508 aa19.1■□□□□ 0.65
USP11-202ENST00000377078 WNT7AO00755 349 aa19.1■□□□□ 0.65
USP11-202ENST00000377078 ERLIN2O94905 339 aa19.1■□□□□ 0.65
USP11-202ENST00000377078 CAMK1Q14012 370 aa19.1■□□□□ 0.65
USP11-202ENST00000377078 GLB1LQ6UWU2 654 aa19.1■□□□□ 0.65
USP11-202ENST00000377078 ZNF598Q86UK7 904 aaKnown RBP19.1■□□□□ 0.65
USP11-202ENST00000377078 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.1■□□□□ 0.65
USP11-202ENST00000377078 HELQQ8TDG4 1101 aa19.1■□□□□ 0.65
USP11-202ENST00000377078 TMEM60Q9H2L4 133 aa19.1■□□□□ 0.65
USP11-202ENST00000377078 CWH43Q9H720 699 aa19.1■□□□□ 0.65
USP11-202ENST00000377078 TUFT1Q9NNX1 390 aa19.1■□□□□ 0.65
USP11-202ENST00000377078 AGPAT5Q9NUQ2 364 aa19.1■□□□□ 0.65
USP11-202ENST00000377078 FAM105AQ9NUU6 356 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms