RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 TCF15Q12870 199 aa17.24■□□□□ 0.35
CLCN6-207ENST00000376497 SMC1AQ14683 1233 aaKnown RBP17.24■□□□□ 0.35
CLCN6-207ENST00000376497 LRCH2Q5VUJ6 765 aa17.24■□□□□ 0.35
CLCN6-207ENST00000376497 RUFY3Q7L099 469 aa17.24■□□□□ 0.35
CLCN6-207ENST00000376497 HELQQ8TDG4 1101 aa17.24■□□□□ 0.35
CLCN6-207ENST00000376497 RSPH1Q8WYR4 309 aa17.24■□□□□ 0.35
CLCN6-207ENST00000376497 PHOX2BQ99453 314 aa17.24■□□□□ 0.35
CLCN6-207ENST00000376497 TRAIPQ9BWF2 469 aa17.24■□□□□ 0.35
CLCN6-207ENST00000376497 APOL5Q9BWW9 433 aa17.24■□□□□ 0.35
CLCN6-207ENST00000376497 SLC26A6Q9BXS9 759 aa17.24■□□□□ 0.35
CLCN6-207ENST00000376497 MRPL9Q9BYD2 267 aaKnown RBP17.24■□□□□ 0.35
CLCN6-207ENST00000376497 CHST12Q9NRB3 414 aa17.24■□□□□ 0.35
CLCN6-207ENST00000376497 VPS54Q9P1Q0 977 aa17.24■□□□□ 0.35
CLCN6-207ENST00000376497 HCFC2Q9Y5Z7 792 aa17.24■□□□□ 0.35
CLCN6-207ENST00000376497 IGKV6-21A0A0C4DH24 114 aa17.23■□□□□ 0.35
CLCN6-207ENST00000376497 C2orf71A6NGG8 1288 aa17.23■□□□□ 0.35
CLCN6-207ENST00000376497 CHMP2AO43633 222 aa17.23■□□□□ 0.35
CLCN6-207ENST00000376497 STBD1O95210 358 aa17.23■□□□□ 0.35
CLCN6-207ENST00000376497 ITIH3Q06033 890 aa17.23■□□□□ 0.35
CLCN6-207ENST00000376497 DRP2Q13474 957 aa17.23■□□□□ 0.35
CLCN6-207ENST00000376497 Q4G0T1 1027 aa17.23■□□□□ 0.35
CLCN6-207ENST00000376497 TPRNQ4KMQ1 711 aa17.23■□□□□ 0.35
CLCN6-207ENST00000376497 B3GNT9Q6UX72 402 aa17.23■□□□□ 0.35
CLCN6-207ENST00000376497 RNF169Q8NCN4 708 aa17.23■□□□□ 0.35
CLCN6-207ENST00000376497 NLRP7Q8WX94 980 aa17.23■□□□□ 0.35
CLCN6-207ENST00000376497 GCOM2Q9BZD3 368 aaPredicted RBP17.23■□□□□ 0.35
CLCN6-207ENST00000376497 C22orf23Q9BZE7 217 aa17.23■□□□□ 0.35
CLCN6-207ENST00000376497 NR2E1Q9Y466 385 aa17.23■□□□□ 0.35
CLCN6-207ENST00000376497 CYP3A7-CYP3A51PA0A087WV96 503 aa17.22■□□□□ 0.35
CLCN6-207ENST00000376497 CLASP2O75122 1294 aaKnown RBP17.22■□□□□ 0.35
CLCN6-207ENST00000376497 CYP3A7P24462 503 aa17.22■□□□□ 0.35
CLCN6-207ENST00000376497 ALDH7A1P49419 539 aaKnown RBP17.22■□□□□ 0.35
CLCN6-207ENST00000376497 BCAR1P56945 870 aa17.22■□□□□ 0.35
CLCN6-207ENST00000376497 NLRP5P59047 1200 aa17.22■□□□□ 0.35
CLCN6-207ENST00000376497 STK3Q13188 491 aa17.22■□□□□ 0.35
CLCN6-207ENST00000376497 XKR3Q5GH77 459 aa17.22■□□□□ 0.35
CLCN6-207ENST00000376497 MIER3Q7Z3K6 550 aa17.22■□□□□ 0.35
CLCN6-207ENST00000376497 TBCKQ8TEA7 893 aa17.22■□□□□ 0.35
CLCN6-207ENST00000376497 GJA10Q969M2 543 aa17.22■□□□□ 0.35
CLCN6-207ENST00000376497 SCLT1Q96NL6 688 aa17.22■□□□□ 0.35
CLCN6-207ENST00000376497 NECTIN4Q96NY8 510 aa17.22■□□□□ 0.35
CLCN6-207ENST00000376497 ADAM7Q9H2U9 754 aa17.22■□□□□ 0.35
CLCN6-207ENST00000376497 CARNS1A5YM72 827 aa17.21■□□□□ 0.35
CLCN6-207ENST00000376497 NT5C1B-RDH14C9J2C7 533 aa17.21■□□□□ 0.35
CLCN6-207ENST00000376497 CSDE1O75534 798 aaKnown RBP17.21■□□□□ 0.35
CLCN6-207ENST00000376497 PSMA5P28066 241 aa17.21■□□□□ 0.35
CLCN6-207ENST00000376497 AVPR2P30518 371 aa17.21■□□□□ 0.35
CLCN6-207ENST00000376497 PHKA2P46019 1235 aa17.21■□□□□ 0.35
CLCN6-207ENST00000376497 VCPP55072 806 aaKnown RBP17.21■□□□□ 0.35
CLCN6-207ENST00000376497 BMS1Q14692 1282 aaKnown RBP17.21■□□□□ 0.35
CLCN6-207ENST00000376497 MTERF2Q49AM1 385 aa17.21■□□□□ 0.35
CLCN6-207ENST00000376497 CES5AQ6NT32 575 aa17.21■□□□□ 0.35
CLCN6-207ENST00000376497 TMEM169Q96HH4 297 aa17.21■□□□□ 0.35
CLCN6-207ENST00000376497 RIPOR3Q96MK2 946 aa17.21■□□□□ 0.35
CLCN6-207ENST00000376497 AIFM3Q96NN9 605 aa17.21■□□□□ 0.35
CLCN6-207ENST00000376497 INO80BQ9C086 356 aaPredicted RBP17.21■□□□□ 0.35
CLCN6-207ENST00000376497 ZBP1Q9H171 429 aa17.21■□□□□ 0.35
CLCN6-207ENST00000376497 POMKQ9H5K3 350 aa17.21■□□□□ 0.35
CLCN6-207ENST00000376497 SEPT9Q9UHD8 586 aaPredicted RBP17.21■□□□□ 0.35
CLCN6-207ENST00000376497 PCDHA4Q9UN74 947 aa17.21■□□□□ 0.35
CLCN6-207ENST00000376497 IRAK3Q9Y616 596 aa17.21■□□□□ 0.35
CLCN6-207ENST00000376497 A0A087WZ62 844 aa17.2■□□□□ 0.34
CLCN6-207ENST00000376497 M0R2N6 131 aa17.2■□□□□ 0.34
CLCN6-207ENST00000376497 SEC24BO95487 1268 aa17.2■□□□□ 0.34
CLCN6-207ENST00000376497 CXCL14O95715 111 aa17.2■□□□□ 0.34
CLCN6-207ENST00000376497 SKIP12755 728 aa17.2■□□□□ 0.34
CLCN6-207ENST00000376497 DNM2P50570 870 aa17.2■□□□□ 0.34
CLCN6-207ENST00000376497 GIT2Q14161 759 aa17.2■□□□□ 0.34
CLCN6-207ENST00000376497 MOXD1Q6UVY6 613 aa17.2■□□□□ 0.34
CLCN6-207ENST00000376497 ZNF410Q86VK4 478 aa17.2■□□□□ 0.34
CLCN6-207ENST00000376497 MBOAT7Q96N66 472 aa17.2■□□□□ 0.34
CLCN6-207ENST00000376497 FDXACB1Q9BRP7 624 aaPredicted RBP17.2■□□□□ 0.34
CLCN6-207ENST00000376497 CDH22Q9UJ99 828 aa17.2■□□□□ 0.34
CLCN6-207ENST00000376497 CYP46A1Q9Y6A2 500 aa17.2■□□□□ 0.34
CLCN6-207ENST00000376497 TMEM150BA6NC51 233 aa17.19■□□□□ 0.34
CLCN6-207ENST00000376497 ZNF623O75123 536 aa17.19■□□□□ 0.34
CLCN6-207ENST00000376497 MAFO75444 373 aaPredicted RBP17.19■□□□□ 0.34
CLCN6-207ENST00000376497 TDP2O95551 362 aa17.19■□□□□ 0.34
CLCN6-207ENST00000376497 CTSAP10619 480 aa17.19■□□□□ 0.34
CLCN6-207ENST00000376497 SFPQP23246 707 aaKnown RBP eCLIP17.19■□□□□ 0.34
CLCN6-207ENST00000376497 SP100P23497 879 aaPredicted RBP17.19■□□□□ 0.34
CLCN6-207ENST00000376497 MTHFRP42898 656 aa17.19■□□□□ 0.34
CLCN6-207ENST00000376497 NUBP1P53384 320 aa17.19■□□□□ 0.34
CLCN6-207ENST00000376497 POLGP54098 1239 aaPredicted RBP17.19■□□□□ 0.34
CLCN6-207ENST00000376497 ZBTB33Q86T24 672 aa17.19■□□□□ 0.34
CLCN6-207ENST00000376497 DDX53Q86TM3 631 aaKnown RBP17.19■□□□□ 0.34
CLCN6-207ENST00000376497 UBALD2Q8IYN6 164 aa17.19■□□□□ 0.34
CLCN6-207ENST00000376497 VPS52Q8N1B4 723 aa17.19■□□□□ 0.34
CLCN6-207ENST00000376497 KREMEN2Q8NCW0 462 aa17.19■□□□□ 0.34
CLCN6-207ENST00000376497 ETNPPLQ8TBG4 499 aa17.19■□□□□ 0.34
CLCN6-207ENST00000376497 IRF2BPLQ9H1B7 796 aa17.19■□□□□ 0.34
CLCN6-207ENST00000376497 NRDE2Q9H7Z3 1164 aa17.19■□□□□ 0.34
CLCN6-207ENST00000376497 FAM105AQ9NUU6 356 aa17.19■□□□□ 0.34
CLCN6-207ENST00000376497 SORCS3Q9UPU3 1222 aa17.19■□□□□ 0.34
CLCN6-207ENST00000376497 ZDBF2Q9HCK1 2354 aa17.18■□□□□ 0.34
CLCN6-207ENST00000376497 DENND4AQ7Z401 1863 aa17.18■□□□□ 0.34
CLCN6-207ENST00000376497 C2CD4DB7Z1M9 353 aa17.18■□□□□ 0.34
CLCN6-207ENST00000376497 ZC3H11AO75152 810 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLCN6-207ENST00000376497 GALTP07902 379 aa17.18■□□□□ 0.34
CLCN6-207ENST00000376497 SSRP1Q08945 709 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms