RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 PPP1R3GB7ZBB8 358 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 FTLP02792 175 aaPredicted RBP19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 SLC9A1P19634 815 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 KLK7P49862 253 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 TMEM62Q0P6H9 643 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 HHATQ5VTY9 493 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 CEP128Q6ZU80 1094 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 LRRC71Q8N4P6 559 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 GRK7Q8WTQ7 553 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 FAM81BQ96LP2 452 aa19.33■□□□□ 0.69
PTPDC1-202ENST00000375360 A0A1W2PQC6 194 aa19.33■□□□□ 0.68
PTPDC1-202ENST00000375360 ICAM1P05362 532 aa19.33■□□□□ 0.68
PTPDC1-202ENST00000375360 PRKCEQ02156 737 aa19.33■□□□□ 0.68
PTPDC1-202ENST00000375360 ZNF211Q13398 564 aaPredicted RBP19.33■□□□□ 0.68
PTPDC1-202ENST00000375360 NR1I3Q14994 352 aa19.33■□□□□ 0.68
PTPDC1-202ENST00000375360 DSTYKQ6XUX3 929 aa19.33■□□□□ 0.68
PTPDC1-202ENST00000375360 CCNYQ8ND76 341 aa19.33■□□□□ 0.68
PTPDC1-202ENST00000375360 HPSEQ9Y251 543 aa19.33■□□□□ 0.68
PTPDC1-202ENST00000375360 C10orf76Q5T2E6 689 aa19.33■□□□□ 0.68
PTPDC1-202ENST00000375360 E4F1Q66K89 784 aaPredicted RBP19.33■□□□□ 0.68
PTPDC1-202ENST00000375360 DAGLBQ8NCG7 672 aa19.33■□□□□ 0.68
PTPDC1-202ENST00000375360 RIT2Q99578 217 aa19.33■□□□□ 0.68
PTPDC1-202ENST00000375360 MRPL4Q9BYD3 311 aaKnown RBP19.33■□□□□ 0.68
PTPDC1-202ENST00000375360 CAPN11Q9UMQ6 739 aa19.33■□□□□ 0.68
PTPDC1-202ENST00000375360 CD2APQ9Y5K6 639 aa19.33■□□□□ 0.68
PTPDC1-202ENST00000375360 ILDR1Q86SU0 546 aaPredicted RBP19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 VCAM1P19320 739 aa19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 MAN1A1P33908 653 aa19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 ITKQ08881 620 aa19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 ARHGEF6Q15052 776 aa19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 GEN1Q17RS7 908 aa19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 FBXL13Q8NEE6 735 aa19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 GPRC5CQ9NQ84 441 aa19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 HSPBP1Q9NZL4 362 aa19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 NFRKBQ6P4R8 1299 aa19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 TAOK1Q7L7X3 1001 aa19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 ZWILCHQ9H900 591 aa19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 MED7O43513 233 aa19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 CFAP157Q5JU67 520 aa19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 KIAA1841Q6NSI8 718 aa19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 EP400NLQ6ZTU2 488 aa19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 LRFN2Q9ULH4 789 aa19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 MAGED2Q9UNF1 606 aaPredicted RBP19.32■□□□□ 0.68
PTPDC1-202ENST00000375360 PGK2P07205 417 aa19.31■□□□□ 0.68
PTPDC1-202ENST00000375360 CYP11B2P19099 503 aa19.31■□□□□ 0.68
PTPDC1-202ENST00000375360 GABPAQ06546 454 aa19.31■□□□□ 0.68
PTPDC1-202ENST00000375360 FRMD5Q7Z6J6 570 aa19.31■□□□□ 0.68
PTPDC1-202ENST00000375360 TOPORSQ9NS56 1045 aaPredicted RBP19.31■□□□□ 0.68
PTPDC1-202ENST00000375360 SUCLA2Q9P2R7 463 aaPredicted RBP19.31■□□□□ 0.68
PTPDC1-202ENST00000375360 POC1B-GALNT4F8VUJ3 575 aa19.31■□□□□ 0.68
PTPDC1-202ENST00000375360 CLCN6P51797 869 aa19.31■□□□□ 0.68
PTPDC1-202ENST00000375360 FBXO38Q6PIJ6 1188 aa19.31■□□□□ 0.68
PTPDC1-202ENST00000375360 GPD1LQ8N335 351 aa19.31■□□□□ 0.68
PTPDC1-202ENST00000375360 SLC38A10Q9HBR0 1119 aa19.31■□□□□ 0.68
PTPDC1-202ENST00000375360 CYP26A1O43174 497 aa19.31■□□□□ 0.68
PTPDC1-202ENST00000375360 CELF2O95319 508 aaKnown RBP19.31■□□□□ 0.68
PTPDC1-202ENST00000375360 CCZ1BP86790 482 aa19.31■□□□□ 0.68
PTPDC1-202ENST00000375360 CCZ1P86791 482 aaPredicted RBP19.31■□□□□ 0.68
PTPDC1-202ENST00000375360 GMCL1Q96IK5 515 aa19.31■□□□□ 0.68
PTPDC1-202ENST00000375360 RGL2O15211 777 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 GPC3P51654 580 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 TMEM35BQ8NCS4 154 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 ODF2LQ9ULJ1 636 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 C6orf222P0C671 652 aaPredicted RBP19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 SETDB1Q15047 1291 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 PPP6R3Q5H9R7 873 aaPredicted RBP19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 RHOT2Q8IXI1 618 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 C10orf67Q8IYJ2 551 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 FBXL16Q8N461 479 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 TC2NQ8N9U0 490 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 CABS1Q96KC9 395 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 GRIN3BO60391 1043 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 MNAT1P51948 309 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 RUSC1Q9BVN2 902 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 MOV10L1Q9BXT6 1211 aaKnown RBP19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 UNC45AQ9H3U1 944 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 TRIM10Q9UDY6 481 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 CIITAP33076 1130 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 SPDYE2Q495Y8 402 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 METTL23Q86XA0 190 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 KCTD6Q8NC69 237 aa19.3■□□□□ 0.68
PTPDC1-202ENST00000375360 GPC5P78333 572 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 DHX9Q08211 1270 aaKnown RBP19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 WDR72Q3MJ13 1102 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 RINT1Q6NUQ1 792 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 PDXDC1Q6P996 788 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 RAD9BQ6WBX8 426 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 OR6J1Q8NGC5 347 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 PBKQ96KB5 322 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 FAM198AQ9UFP1 575 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 SLCO1A2P46721 670 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 TKFCQ3LXA3 575 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 C6orf163Q5TEZ5 329 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 CCDC110Q8TBZ0 833 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 CCDC151A5D8V7 595 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 PRKCBP05771 671 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 YWHAGP61981 247 aaKnown RBP eCLIP19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 SIX6OS1Q8N1H7 587 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 C2orf40Q9H1Z8 148 aa19.29■□□□□ 0.68
PTPDC1-202ENST00000375360 ABCB6Q9NP58 842 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms