RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 ERMNQ8TAM6 284 aa19.19■□□□□ 0.66
VPS26A-202ENST00000373382 POP1Q99575 1024 aaKnown RBP19.19■□□□□ 0.66
VPS26A-202ENST00000373382 MTRF1LQ9UGC7 380 aaKnown RBP19.19■□□□□ 0.66
VPS26A-202ENST00000373382 DLEC1Q9Y238 1755 aa19.19■□□□□ 0.66
VPS26A-202ENST00000373382 TCP11X1B4DZS4 312 aa19.19■□□□□ 0.66
VPS26A-202ENST00000373382 MYCNP04198 464 aaPredicted RBP19.19■□□□□ 0.66
VPS26A-202ENST00000373382 PAEPP09466 180 aa19.19■□□□□ 0.66
VPS26A-202ENST00000373382 GCFC2P16383 781 aaKnown RBP19.19■□□□□ 0.66
VPS26A-202ENST00000373382 SCNN1DP51172 638 aa19.19■□□□□ 0.66
VPS26A-202ENST00000373382 SHROOM1Q2M3G4 852 aaPredicted RBP19.19■□□□□ 0.66
VPS26A-202ENST00000373382 TBC1D10BQ4KMP7 808 aaPredicted RBP19.19■□□□□ 0.66
VPS26A-202ENST00000373382 SLC10A5Q5PT55 438 aa19.19■□□□□ 0.66
VPS26A-202ENST00000373382 FAM182BQ5T319 152 aa19.19■□□□□ 0.66
VPS26A-202ENST00000373382 SLFN11Q7Z7L1 901 aa19.19■□□□□ 0.66
VPS26A-202ENST00000373382 BTBD6Q96KE9 485 aa19.19■□□□□ 0.66
VPS26A-202ENST00000373382 ZNF317Q96PQ6 595 aaPredicted RBP19.19■□□□□ 0.66
VPS26A-202ENST00000373382 PAIP2Q9BPZ3 127 aaKnown RBP19.19■□□□□ 0.66
VPS26A-202ENST00000373382 A8MUI8 341 aa19.18■□□□□ 0.66
VPS26A-202ENST00000373382 DDX3YO15523 660 aaKnown RBP19.18■□□□□ 0.66
VPS26A-202ENST00000373382 PRKCIP41743 596 aa19.18■□□□□ 0.66
VPS26A-202ENST00000373382 MAPK7Q13164 816 aa19.18■□□□□ 0.66
VPS26A-202ENST00000373382 LACTB2Q53H82 288 aaPredicted RBP19.18■□□□□ 0.66
VPS26A-202ENST00000373382 BARGINQ6ZT62 677 aa19.18■□□□□ 0.66
VPS26A-202ENST00000373382 CPNE8Q86YQ8 564 aa19.18■□□□□ 0.66
VPS26A-202ENST00000373382 SLC20A1Q8WUM9 679 aa19.18■□□□□ 0.66
VPS26A-202ENST00000373382 LMNB1P20700 586 aa19.18■□□□□ 0.66
VPS26A-202ENST00000373382 RHBDL3P58872 404 aa19.18■□□□□ 0.66
VPS26A-202ENST00000373382 DPY19L2P1Q6NXN4 242 aa19.18■□□□□ 0.66
VPS26A-202ENST00000373382 NAP1L3Q99457 506 aaPredicted RBP19.18■□□□□ 0.66
VPS26A-202ENST00000373382 EPB41L4BQ9H329 900 aa19.18■□□□□ 0.66
VPS26A-202ENST00000373382 METTL14Q9HCE5 456 aaKnown RBP19.18■□□□□ 0.66
VPS26A-202ENST00000373382 TYW1Q9NV66 732 aaKnown RBP19.18■□□□□ 0.66
VPS26A-202ENST00000373382 USP40Q9NVE5 1235 aa19.18■□□□□ 0.66
VPS26A-202ENST00000373382 COG5Q9UP83 839 aa19.18■□□□□ 0.66
VPS26A-202ENST00000373382 ASTN1O14525 1302 aa19.18■□□□□ 0.66
VPS26A-202ENST00000373382 GPR75-ASB3A0A0A6YYF3 556 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 PDXKO00764 312 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 KIAA0391O15091 583 aaKnown RBP19.17■□□□□ 0.66
VPS26A-202ENST00000373382 MGRN1O60291 552 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 ANP32DO95626 131 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 ZBTB48P10074 688 aaPredicted RBP19.17■□□□□ 0.66
VPS26A-202ENST00000373382 TM4SF1P30408 202 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 GPSM2P81274 684 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 POU5F1Q01860 360 aaKnown RBP19.17■□□□□ 0.66
VPS26A-202ENST00000373382 CBWD6Q4V339 395 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 CBWD3Q5JTY5 395 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 CBWD5Q5RIA9 395 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 CCDC137Q6PK04 289 aaKnown RBP19.17■□□□□ 0.66
VPS26A-202ENST00000373382 ATXN2LQ8WWM7 1075 aaKnown RBP19.17■□□□□ 0.66
VPS26A-202ENST00000373382 ZDHHC18Q9NUE0 388 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 TRAF3IP3Q9Y228 551 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 STRCP1A6NGW2 1772 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 TCRBV7S2A1N4TA0A589 114 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 hCG_1984214I3L0E3 225 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 DNAJC8O75937 253 aaPredicted RBP19.17■□□□□ 0.66
VPS26A-202ENST00000373382 PEX19P40855 299 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 PSEN1P49768 467 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 ARHGAP4P98171 946 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 KLRC3Q07444 240 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 ZNF713Q8N859 430 aaPredicted RBP19.17■□□□□ 0.66
VPS26A-202ENST00000373382 KCNV2Q8TDN2 545 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 KLHL29Q96CT2 875 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 MXD3Q9BW11 206 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 ADAM7Q9H2U9 754 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 TRIM33Q9UPN9 1127 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 TRPC6Q9Y210 931 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 NHSL1Q5SYE7 1610 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 ANKRD63C9JTQ0 380 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 DIAPH2O60879 1101 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 UBXN2AP68543 259 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 SEPT14Q6ZU15 432 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 AGAP11Q8TF27 550 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 DDX23Q9BUQ8 820 aaKnown RBP19.17■□□□□ 0.66
VPS26A-202ENST00000373382 NSRP1Q9H0G5 558 aaKnown RBP19.17■□□□□ 0.66
VPS26A-202ENST00000373382 PCIF1Q9H4Z3 704 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 ECT2Q9H8V3 914 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 ACP6Q9NPH0 428 aa19.17■□□□□ 0.66
VPS26A-202ENST00000373382 FTLP02792 175 aaPredicted RBP19.16■□□□□ 0.66
VPS26A-202ENST00000373382 SMARCA1P28370 1054 aa19.16■□□□□ 0.66
VPS26A-202ENST00000373382 TNIP1Q15025 636 aa19.16■□□□□ 0.66
VPS26A-202ENST00000373382 ZDHHC24Q6UX98 284 aa19.16■□□□□ 0.66
VPS26A-202ENST00000373382 NSMFQ6X4W1 530 aa19.16■□□□□ 0.66
VPS26A-202ENST00000373382 SYCP3Q8IZU3 236 aa19.16■□□□□ 0.66
VPS26A-202ENST00000373382 HOOK2Q96ED9 719 aa19.16■□□□□ 0.66
VPS26A-202ENST00000373382 RABGAP1Q9Y3P9 1069 aa19.16■□□□□ 0.66
VPS26A-202ENST00000373382 FOXN3O00409 490 aaPredicted RBP19.16■□□□□ 0.66
VPS26A-202ENST00000373382 IGF2BP3O00425 579 aaKnown RBP eCLIP19.16■□□□□ 0.66
VPS26A-202ENST00000373382 SPOPO43791 374 aa19.16■□□□□ 0.66
VPS26A-202ENST00000373382 MMP13P45452 471 aa19.16■□□□□ 0.66
VPS26A-202ENST00000373382 TCP10Q12799 353 aa19.16■□□□□ 0.66
VPS26A-202ENST00000373382 C6orf118Q5T5N4 469 aa19.16■□□□□ 0.66
VPS26A-202ENST00000373382 CTNNAL1Q9UBT7 734 aa19.16■□□□□ 0.66
VPS26A-202ENST00000373382 THRAP3Q9Y2W1 955 aaKnown RBP19.16■□□□□ 0.66
VPS26A-202ENST00000373382 C21orf2O43822 256 aa19.15■□□□□ 0.66
VPS26A-202ENST00000373382 PSMC2P35998 433 aaKnown RBP19.15■□□□□ 0.66
VPS26A-202ENST00000373382 JAM2P57087 298 aa19.15■□□□□ 0.66
VPS26A-202ENST00000373382 PHLDB2Q86SQ0 1253 aa19.15■□□□□ 0.66
VPS26A-202ENST00000373382 RPTORQ8N122 1335 aa19.15■□□□□ 0.66
VPS26A-202ENST00000373382 RPGRQ92834 1020 aaKnown RBP19.15■□□□□ 0.66
VPS26A-202ENST00000373382 PNMA3Q9UL41 463 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms