RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CDY2AQ9Y6F7 541 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 CYP3A7-CYP3A51PA0A087WV96 503 aa11.53□□□□□ -0.56
COL5A1-202ENST00000371820 M0R2N6 131 aa11.53□□□□□ -0.56
COL5A1-202ENST00000371820 ADAMTS3O15072 1205 aa11.53□□□□□ -0.56
COL5A1-202ENST00000371820 CYP3A7P24462 503 aa11.53□□□□□ -0.56
COL5A1-202ENST00000371820 U2AF2P26368 475 aaKnown RBP eCLIP11.53□□□□□ -0.56
COL5A1-202ENST00000371820 HTRA4P83105 476 aaPredicted RBP11.53□□□□□ -0.56
COL5A1-202ENST00000371820 MGAT3Q09327 533 aa11.53□□□□□ -0.56
COL5A1-202ENST00000371820 RILPL1Q5EBL4 403 aa11.53□□□□□ -0.56
COL5A1-202ENST00000371820 MARCH8Q5T0T0 291 aa11.53□□□□□ -0.56
COL5A1-202ENST00000371820 SWSAP1Q6NVH7 229 aa11.53□□□□□ -0.56
COL5A1-202ENST00000371820 RUFY4Q6ZNE9 571 aa11.53□□□□□ -0.56
COL5A1-202ENST00000371820 TSHZ1Q6ZSZ6 1077 aa11.53□□□□□ -0.56
COL5A1-202ENST00000371820 DHX40Q8IX18 779 aaKnown RBP11.53□□□□□ -0.56
COL5A1-202ENST00000371820 MYOCDQ8IZQ8 938 aa11.53□□□□□ -0.56
COL5A1-202ENST00000371820 SP7Q8TDD2 431 aaPredicted RBP11.53□□□□□ -0.56
COL5A1-202ENST00000371820 CACTINQ8WUQ7 758 aaKnown RBP11.53□□□□□ -0.56
COL5A1-202ENST00000371820 SLC5A5Q92911 643 aa11.53□□□□□ -0.56
COL5A1-202ENST00000371820 LENG9Q96B70 501 aa11.53□□□□□ -0.56
COL5A1-202ENST00000371820 PHF20Q9BVI0 1012 aa11.53□□□□□ -0.56
COL5A1-202ENST00000371820 FAM49AQ9H0Q0 323 aaPredicted RBP11.53□□□□□ -0.56
COL5A1-202ENST00000371820 MAFBQ9Y5Q3 323 aaPredicted RBP11.53□□□□□ -0.56
COL5A1-202ENST00000371820 MSH4O15457 936 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 MAGEB2O15479 319 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 ZSCAN12O43309 604 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 CHRNA1P02708 482 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 GHRP10912 638 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 SFPQP23246 707 aaKnown RBP eCLIP11.52□□□□□ -0.57
COL5A1-202ENST00000371820 KRT2P35908 639 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 MTHFD1LQ6UB35 978 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 NEK8Q86SG6 692 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 CREBRFQ8IUR6 639 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 ZNF710Q8N1W2 664 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 AIFM3Q96NN9 605 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 SAMD11Q96NU1 681 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 C17orf80Q9BSJ5 609 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 C1QTNF1Q9BXJ1 281 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 FTHL17Q9BXU8 183 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 FOXP1Q9H334 677 aaPredicted RBP11.52□□□□□ -0.57
COL5A1-202ENST00000371820 GOLPH3LQ9H4A5 285 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 DISC1Q9NRI5 854 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 RNF216Q9NWF9 866 aaPredicted RBP11.52□□□□□ -0.57
COL5A1-202ENST00000371820 OGFRQ9NZT2 677 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 GABBR1Q9UBS5 961 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 DDX25Q9UHL0 483 aaKnown RBP11.52□□□□□ -0.57
COL5A1-202ENST00000371820 RAPGEFL1Q9UHV5 662 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 IGSF9BQ9UPX0 1349 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 KDM3AQ9Y4C1 1321 aa11.52□□□□□ -0.57
COL5A1-202ENST00000371820 A0A1B0GVL5 298 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 DKC1O60832 514 aaKnown RBP eCLIP11.51□□□□□ -0.57
COL5A1-202ENST00000371820 TDP2O95551 362 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 KLRC1P26715 233 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 TMOD1P28289 359 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 NDUFA8P51970 172 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 LPIN1Q14693 890 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 INF2Q27J81 1249 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 LETM2Q2VYF4 491 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 FBXO47Q5MNV8 452 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 MIER3Q7Z3K6 550 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 AOPEPQ8N6M6 819 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 MLKLQ8NB16 471 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 FBXO22Q8NEZ5 403 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 TRAPPC12Q8WVT3 735 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 TOP1MTQ969P6 601 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 FAM20AQ96MK3 541 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 MBOAT7Q96N66 472 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 YME1L1Q96TA2 773 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 CELF4Q9BZC1 486 aaKnown RBP11.51□□□□□ -0.57
COL5A1-202ENST00000371820 OSBPL7Q9BZF2 842 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 UBE2ZQ9H832 354 aaPredicted RBP11.51□□□□□ -0.57
COL5A1-202ENST00000371820 NRBP2Q9NSY0 501 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 KCNJ14Q9UNX9 436 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 HPSEQ9Y251 543 aa11.51□□□□□ -0.57
COL5A1-202ENST00000371820 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.5□□□□□ -0.57
COL5A1-202ENST00000371820 TBX3O15119 743 aa11.5□□□□□ -0.57
COL5A1-202ENST00000371820 CHMP2AO43633 222 aa11.5□□□□□ -0.57
COL5A1-202ENST00000371820 MARCH6O60337 910 aa11.5□□□□□ -0.57
COL5A1-202ENST00000371820 PSMD10O75832 226 aa11.5□□□□□ -0.57
COL5A1-202ENST00000371820 OATP04181 439 aa11.5□□□□□ -0.57
COL5A1-202ENST00000371820 MYL5Q02045 173 aa11.5□□□□□ -0.57
COL5A1-202ENST00000371820 PAK2Q13177 524 aa11.5□□□□□ -0.57
COL5A1-202ENST00000371820 NPY5RQ15761 445 aa11.5□□□□□ -0.57
COL5A1-202ENST00000371820 AXDND1Q5T1B0 1012 aaPredicted RBP11.5□□□□□ -0.57
COL5A1-202ENST00000371820 RESP18Q5W5W9 173 aa11.5□□□□□ -0.57
COL5A1-202ENST00000371820 PPP4R3AQ6IN85 833 aa11.5□□□□□ -0.57
COL5A1-202ENST00000371820 C11orf57Q6ZUT1 292 aaPredicted RBP11.5□□□□□ -0.57
COL5A1-202ENST00000371820 NYAP1Q6ZVC0 841 aa11.5□□□□□ -0.57
COL5A1-202ENST00000371820 CCAR2Q8N163 923 aaKnown RBP11.5□□□□□ -0.57
COL5A1-202ENST00000371820 KRI1Q8N9T8 703 aaKnown RBP11.5□□□□□ -0.57
COL5A1-202ENST00000371820 UIMC1Q96RL1 719 aa11.5□□□□□ -0.57
COL5A1-202ENST00000371820 UNC45AQ9H3U1 944 aa11.5□□□□□ -0.57
COL5A1-202ENST00000371820 CLIC4Q9Y696 253 aa11.5□□□□□ -0.57
COL5A1-202ENST00000371820 RALGAPA2Q2PPJ7 1873 aa11.5□□□□□ -0.57
COL5A1-202ENST00000371820 MYH9P35579 1960 aaKnown RBP11.5□□□□□ -0.57
COL5A1-202ENST00000371820 NLRC5Q86WI3 1866 aa11.49□□□□□ -0.57
COL5A1-202ENST00000371820 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.49□□□□□ -0.57
COL5A1-202ENST00000371820 EDIL3O43854 480 aa11.49□□□□□ -0.57
COL5A1-202ENST00000371820 SMC2O95347 1197 aa11.49□□□□□ -0.57
COL5A1-202ENST00000371820 SLU7O95391 586 aaKnown RBP11.49□□□□□ -0.57
COL5A1-202ENST00000371820 STAG3L1P0CL83 205 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms