RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 RIC8AQ9NPQ8 531 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 LMCD1Q9NZU5 365 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 ANKIB1Q9P2G1 1089 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 COL5A2P05997 1499 aaPredicted RBP12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 RGS16O15492 202 aaPredicted RBP12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 PDHA1P08559 390 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 PCP11498 1178 aaKnown RBP12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 CALB2P22676 271 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 ROR2Q01974 943 aaKnown RBP12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 EPHA7Q15375 998 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 CKAP2Q8WWK9 683 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 MYLK2Q9H1R3 596 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 TMOD4Q9NZQ9 345 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 CHKBQ9Y259 395 aa12.63□□□□□ -0.39
SMARCA1-201ENST00000371121 CYP1A1P04798 512 aaPredicted RBP12.62□□□□□ -0.39
SMARCA1-201ENST00000371121 PLCG2P16885 1265 aa12.62□□□□□ -0.39
SMARCA1-201ENST00000371121 GCLCP48506 637 aaPredicted RBP12.62□□□□□ -0.39
SMARCA1-201ENST00000371121 TNIP1Q15025 636 aa12.62□□□□□ -0.39
SMARCA1-201ENST00000371121 MYOCDQ8IZQ8 938 aa12.62□□□□□ -0.39
SMARCA1-201ENST00000371121 NCANO14594 1321 aa12.62□□□□□ -0.39
SMARCA1-201ENST00000371121 MPHOSPH10O00566 681 aaKnown RBP12.62□□□□□ -0.39
SMARCA1-201ENST00000371121 FERP16591 822 aa12.62□□□□□ -0.39
SMARCA1-201ENST00000371121 PTDSS1P48651 473 aaKnown RBP12.62□□□□□ -0.39
SMARCA1-201ENST00000371121 DENND2CQ68D51 928 aa12.62□□□□□ -0.39
SMARCA1-201ENST00000371121 SPATA21Q7Z572 469 aa12.62□□□□□ -0.39
SMARCA1-201ENST00000371121 SLC51AQ86UW1 340 aa12.62□□□□□ -0.39
SMARCA1-201ENST00000371121 SPOCK2Q92563 424 aa12.62□□□□□ -0.39
SMARCA1-201ENST00000371121 CYP39A1Q9NYL5 469 aa12.62□□□□□ -0.39
SMARCA1-201ENST00000371121 SNED1Q8TER0 1413 aa12.62□□□□□ -0.39
SMARCA1-201ENST00000371121 MYH14Q7Z406 1995 aaKnown RBP12.62□□□□□ -0.39
SMARCA1-201ENST00000371121 ENTPD5O75356 428 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 CTNNA2P26232 953 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 RFC5P40937 340 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 MECOMQ03112 1051 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 NEK8Q86SG6 692 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 MFN1Q8IWA4 741 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 ZFAND2BQ8WV99 257 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 ART4Q93070 314 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 EURLQ9NYK6 297 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 RPS6KL1Q9Y6S9 549 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 O00370 1275 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 FAM163BP0C2L3 166 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 PEX5P50542 639 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 NPEPPSP55786 919 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 AMPD3Q01432 767 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 TFAP4Q01664 338 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 C10orf76Q5T2E6 689 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 SLC44A5Q8NCS7 719 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 AZIN2Q96A70 460 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 ABCA3Q99758 1704 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 MIPEPQ99797 713 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 LRMDAQ9H2I8 198 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 GOPCQ9HD26 462 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 ATP8A2Q9NTI2 1148 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 STK17AQ9UEE5 414 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 ROBO1Q9Y6N7 1651 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 CCDC169A6NNP5 214 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 CHKAP35790 457 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 PSMD2Q13200 908 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 LBRQ14739 615 aaKnown RBP12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 RFWD3Q6PCD5 774 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 PRUNE1Q86TP1 453 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 GDAP1Q8TB36 358 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 STK32AQ8WU08 396 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 CEP63Q96MT8 703 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 DENND2DQ9H6A0 471 aaPredicted RBP12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 BSDC1Q9NW68 430 aaPredicted RBP12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 BIN2Q9UBW5 565 aaPredicted RBP12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 ARL2BPQ9Y2Y0 163 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 DAAM1Q9Y4D1 1078 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 SPATA31A1Q5TZJ5 1347 aa12.61□□□□□ -0.39
SMARCA1-201ENST00000371121 ADAMTS2O95450 1211 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 TAC1P20366 129 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 SKIV2L2P42285 1042 aaKnown RBP12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 TRAF1Q13077 416 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 MOGSQ13724 837 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 RBBP5Q15291 538 aaKnown RBP12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 C6orf118Q5T5N4 469 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 RNF43Q68DV7 783 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 TEKT4Q8WW24 435 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 UBE2OQ9C0C9 1292 aaKnown RBP12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 CCDC15Q0P6D6 951 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 RRP1BQ14684 758 aaKnown RBP12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 CTC1Q2NKJ3 1217 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 BTNL9Q6UXG8 535 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 TEX9Q8N6V9 391 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 C7orf43Q8WVR3 580 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 KIAA1683Q9H0B3 1180 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 ETNK1Q9HBU6 452 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 SEC63Q9UGP8 760 aaKnown RBP12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 TSPY2A6NKD2 308 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 AKAP3O75969 853 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 SPATA31D3P0C874 917 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 TARSP26639 723 aaKnown RBP12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 CALRP27797 417 aaKnown RBP12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 ACVR2BQ13705 512 aa12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 NONOQ15233 471 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMARCA1-201ENST00000371121 RHBDF2Q6PJF5 856 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms