RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 GH1P01241 217 aa13.27□□□□□ -0.28
USF1-203ENST00000368021 HOXD13P35453 343 aa13.27□□□□□ -0.28
USF1-203ENST00000368021 GJA8P48165 433 aa13.27□□□□□ -0.28
USF1-203ENST00000368021 ARHGAP1Q07960 439 aa13.27□□□□□ -0.28
USF1-203ENST00000368021 ACVR2BQ13705 512 aa13.27□□□□□ -0.28
USF1-203ENST00000368021 SH2D3AQ9BRG2 576 aa13.27□□□□□ -0.28
USF1-203ENST00000368021 TYW1Q9NV66 732 aaKnown RBP13.27□□□□□ -0.28
USF1-203ENST00000368021 NMT1P30419 496 aaKnown RBP13.27□□□□□ -0.29
USF1-203ENST00000368021 COPB1P53618 953 aaKnown RBP13.27□□□□□ -0.29
USF1-203ENST00000368021 GSDMDP57764 484 aa13.27□□□□□ -0.29
USF1-203ENST00000368021 DUSP28Q4G0W2 176 aa13.27□□□□□ -0.29
USF1-203ENST00000368021 IQSEC1Q6DN90 963 aa13.27□□□□□ -0.29
USF1-203ENST00000368021 TRMT1LQ7Z2T5 733 aaKnown RBP13.27□□□□□ -0.29
USF1-203ENST00000368021 NELFCDQ8IXH7 590 aa13.27□□□□□ -0.29
USF1-203ENST00000368021 PPTC7Q8NI37 304 aa13.27□□□□□ -0.29
USF1-203ENST00000368021 COPS5Q92905 334 aa13.27□□□□□ -0.29
USF1-203ENST00000368021 LENG1Q96BZ8 264 aaPredicted RBP13.27□□□□□ -0.29
USF1-203ENST00000368021 CNOT6LQ96LI5 555 aaKnown RBP13.27□□□□□ -0.29
USF1-203ENST00000368021 SMARCAD1Q9H4L7 1026 aa13.27□□□□□ -0.29
USF1-203ENST00000368021 DHX33Q9H6R0 707 aaKnown RBP13.27□□□□□ -0.29
USF1-203ENST00000368021 ATP6V0A4Q9HBG4 840 aa13.27□□□□□ -0.29
USF1-203ENST00000368021 POLD4Q9HCU8 107 aa13.27□□□□□ -0.29
USF1-203ENST00000368021 GEMIN8Q9NWZ8 242 aaKnown RBP13.27□□□□□ -0.29
USF1-203ENST00000368021 OGFRQ9NZT2 677 aa13.27□□□□□ -0.29
USF1-203ENST00000368021 KCNG1Q9UIX4 513 aa13.27□□□□□ -0.29
USF1-203ENST00000368021 CALUO43852 315 aaPredicted RBP13.26□□□□□ -0.29
USF1-203ENST00000368021 PRPF6O94906 941 aaKnown RBP13.26□□□□□ -0.29
USF1-203ENST00000368021 GNA14O95837 355 aa13.26□□□□□ -0.29
USF1-203ENST00000368021 RFC5P40937 340 aa13.26□□□□□ -0.29
USF1-203ENST00000368021 ADCYAP1R1P41586 468 aa13.26□□□□□ -0.29
USF1-203ENST00000368021 TARBP2Q15633 366 aaKnown RBP13.26□□□□□ -0.29
USF1-203ENST00000368021 NFIL3Q16649 462 aa13.26□□□□□ -0.29
USF1-203ENST00000368021 FAM102BQ5T8I3 360 aa13.26□□□□□ -0.29
USF1-203ENST00000368021 FILIP1Q7Z7B0 1213 aa13.26□□□□□ -0.29
USF1-203ENST00000368021 GLG1Q92896 1179 aa13.26□□□□□ -0.29
USF1-203ENST00000368021 CEP89Q96ST8 783 aa13.26□□□□□ -0.29
USF1-203ENST00000368021 NTPCRQ9BSD7 190 aaKnown RBP13.26□□□□□ -0.29
USF1-203ENST00000368021 NRBP1Q9UHY1 535 aa13.26□□□□□ -0.29
USF1-203ENST00000368021 N4BP3O15049 544 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 SEPT4O43236 478 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 ZNF865P0CJ78 1059 aaPredicted RBP13.25□□□□□ -0.29
USF1-203ENST00000368021 ABCD1P33897 745 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 PBX1P40424 430 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 SMTNP53814 917 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 NCKAP1LP55160 1127 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 MARSP56192 900 aaKnown RBP13.25□□□□□ -0.29
USF1-203ENST00000368021 DMP1Q13316 513 aaPredicted RBP13.25□□□□□ -0.29
USF1-203ENST00000368021 CCDC144BQ3MJ40 725 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 MTERF2Q49AM1 385 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 LHX8Q68G74 356 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 SPECC1LQ69YQ0 1117 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 MAEAQ7L5Y9 396 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 CCDC186Q7Z3E2 898 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 TMC6Q7Z403 805 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 HOMEZQ8IX15 550 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 EXOC8Q8IYI6 725 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 ATP8B4Q8TF62 1192 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 SPIRE2Q8WWL2 714 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 KCNN1Q92952 543 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 TUBGCP2Q9BSJ2 902 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 GPRC5CQ9NQ84 441 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 XPNPEP1Q9NQW7 623 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 DDX20Q9UHI6 824 aaKnown RBP13.25□□□□□ -0.29
USF1-203ENST00000368021 ZMYM2Q9UBW7 1377 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 LGALS16A8MUM7 142 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 K7ENM7 598 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 HOXD8P13378 290 aaPredicted RBP13.25□□□□□ -0.29
USF1-203ENST00000368021 SCP2P22307 547 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 PTGS1P23219 599 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 RPL13P26373 211 aaKnown RBP13.25□□□□□ -0.29
USF1-203ENST00000368021 POLGP54098 1239 aaPredicted RBP13.25□□□□□ -0.29
USF1-203ENST00000368021 GTF2BQ00403 316 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 EMC2Q15006 297 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 TMEM63BQ5T3F8 832 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 GOLGA5Q8TBA6 731 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 TMEM174Q8WUU8 243 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 SLC7A3Q8WY07 619 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 HVCN1Q96D96 273 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 ZNF830Q96NB3 372 aaPredicted RBP13.25□□□□□ -0.29
USF1-203ENST00000368021 TMEM206Q9H813 350 aa13.25□□□□□ -0.29
USF1-203ENST00000368021 ITIH6Q6UXX5 1313 aa13.24□□□□□ -0.29
USF1-203ENST00000368021 CETN3O15182 167 aa13.24□□□□□ -0.29
USF1-203ENST00000368021 TEX33O43247 280 aa13.24□□□□□ -0.29
USF1-203ENST00000368021 TGFB1I1O43294 461 aa13.24□□□□□ -0.29
USF1-203ENST00000368021 GAS2O43903 313 aaKnown RBP13.24□□□□□ -0.29
USF1-203ENST00000368021 PPFIA4O75335 1185 aa13.24□□□□□ -0.29
USF1-203ENST00000368021 SMPD1P17405 629 aa13.24□□□□□ -0.29
USF1-203ENST00000368021 NR2F2P24468 414 aa13.24□□□□□ -0.29
USF1-203ENST00000368021 PEX3P56589 373 aa13.24□□□□□ -0.29
USF1-203ENST00000368021 SNRPFP62306 86 aaKnown RBP13.24□□□□□ -0.29
USF1-203ENST00000368021 KCNA1Q09470 495 aa13.24□□□□□ -0.29
USF1-203ENST00000368021 ADAM9Q13443 819 aa13.24□□□□□ -0.29
USF1-203ENST00000368021 ZC2HC1CQ53FD0 456 aaPredicted RBP13.24□□□□□ -0.29
USF1-203ENST00000368021 ZNF771Q7L3S4 317 aaPredicted RBP13.24□□□□□ -0.29
USF1-203ENST00000368021 HS2ST1Q7LGA3 356 aa13.24□□□□□ -0.29
USF1-203ENST00000368021 EEF2KMTQ96G04 330 aa13.24□□□□□ -0.29
USF1-203ENST00000368021 GBP3Q9H0R5 595 aa13.24□□□□□ -0.29
USF1-203ENST00000368021 VPS16Q9H269 839 aa13.24□□□□□ -0.29
USF1-203ENST00000368021 TAB2Q9NYJ8 693 aa13.24□□□□□ -0.29
USF1-203ENST00000368021 ERAP1Q9NZ08 941 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms