RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 PRKCZQ05513 592 aa25.45■■□□□ 1.67
SDF4-202ENST00000360001 MAN2A1Q16706 1144 aa25.45■■□□□ 1.67
SDF4-202ENST00000360001 DGKDQ16760 1214 aa25.45■■□□□ 1.67
SDF4-202ENST00000360001 CCDC40Q4G0X9 1142 aa25.45■■□□□ 1.67
SDF4-202ENST00000360001 CACTINQ8WUQ7 758 aaKnown RBP25.45■■□□□ 1.67
SDF4-202ENST00000360001 TRAPPC12Q8WVT3 735 aa25.45■■□□□ 1.67
SDF4-202ENST00000360001 ARHGAP28Q9P2N2 729 aa25.45■■□□□ 1.67
SDF4-202ENST00000360001 TBX20Q9UMR3 447 aa25.45■■□□□ 1.67
SDF4-202ENST00000360001 DENND3A2RUS2 1198 aa25.45■■□□□ 1.66
SDF4-202ENST00000360001 DRP2Q13474 957 aa25.45■■□□□ 1.66
SDF4-202ENST00000360001 TLK2Q86UE8 772 aa25.45■■□□□ 1.66
SDF4-202ENST00000360001 TRIM59Q8IWR1 403 aa25.45■■□□□ 1.66
SDF4-202ENST00000360001 TRIB2Q92519 343 aa25.45■■□□□ 1.66
SDF4-202ENST00000360001 DMAC2Q9NW81 257 aa25.45■■□□□ 1.66
SDF4-202ENST00000360001 FAM184BQ9ULE4 1060 aa25.45■■□□□ 1.66
SDF4-202ENST00000360001 PCNTO95613 3336 aa25.45■■□□□ 1.66
SDF4-202ENST00000360001 ITIH6Q6UXX5 1313 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 PES1O00541 588 aaKnown RBP25.44■■□□□ 1.66
SDF4-202ENST00000360001 AKAP3O75969 853 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 DNM2P50570 870 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 MKRN4PQ13434 485 aaPredicted RBP25.44■■□□□ 1.66
SDF4-202ENST00000360001 VWA3BQ502W6 1294 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 ARMCX5Q6P1M9 558 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 MAP4K3Q8IVH8 894 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 EXOC8Q8IYI6 725 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 TRPV1Q8NER1 839 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 KCNG1Q9UIX4 513 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 ZNF215Q9UL58 517 aaPredicted RBP25.44■■□□□ 1.66
SDF4-202ENST00000360001 ZKSCAN5Q9Y2L8 839 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 CASP8AP2Q9UKL3 1982 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 H3BRB1 525 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 SLC16A3O15427 465 aaKnown RBP25.44■■□□□ 1.66
SDF4-202ENST00000360001 GAS2O43903 313 aaKnown RBP25.44■■□□□ 1.66
SDF4-202ENST00000360001 NAMPTP43490 491 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 CASP4P49662 377 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 KIF22Q14807 665 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 LRRC8AQ8IWT6 810 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 KCNN1Q92952 543 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 NDST4Q9H3R1 872 aa25.44■■□□□ 1.66
SDF4-202ENST00000360001 TUT1Q9H6E5 874 aaKnown RBP25.44■■□□□ 1.66
SDF4-202ENST00000360001 INSRRP14616 1297 aa25.43■■□□□ 1.66
SDF4-202ENST00000360001 LRMPQ12912 555 aa25.43■■□□□ 1.66
SDF4-202ENST00000360001 PPP2R5AQ15172 486 aa25.43■■□□□ 1.66
SDF4-202ENST00000360001 ZNF484Q5JVG2 852 aa25.43■■□□□ 1.66
SDF4-202ENST00000360001 ZSCAN30Q86W11 494 aa25.43■■□□□ 1.66
SDF4-202ENST00000360001 SLC9A9Q8IVB4 645 aa25.43■■□□□ 1.66
SDF4-202ENST00000360001 Q9Y3F1 56 aa25.43■■□□□ 1.66
SDF4-202ENST00000360001 A0A1W2PQC6 194 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 TISP43B9A030 160 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 H0YCG3 227 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 IER5Q5VY09 327 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 CEP135Q66GS9 1140 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 TAS1R3Q7RTX0 852 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 FRMD5Q7Z6J6 570 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 TMEM174Q8WUU8 243 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 CGNQ9P2M7 1197 aaKnown RBP25.42■■□□□ 1.66
SDF4-202ENST00000360001 THSD7BQ9C0I4 1608 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 CYBAP13498 195 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 MYBPC2Q14324 1141 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 MFSD14CQ5VZR4 134 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 C12orf56Q8IXR9 622 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 LRRC71Q8N4P6 559 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 CCDC150Q8NCX0 1101 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 TCP11Q8WWU5 503 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 JPH2Q9BR39 696 aaPredicted RBP25.42■■□□□ 1.66
SDF4-202ENST00000360001 SUGCTQ9HAC7 445 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 EXOC7Q9UPT5 735 aa25.42■■□□□ 1.66
SDF4-202ENST00000360001 SIP14410 1827 aa25.41■■□□□ 1.66
SDF4-202ENST00000360001 C22orf31O95567 290 aa25.41■■□□□ 1.66
SDF4-202ENST00000360001 SNRPFP62306 86 aaKnown RBP25.41■■□□□ 1.66
SDF4-202ENST00000360001 IRX5P78411 483 aaPredicted RBP25.41■■□□□ 1.66
SDF4-202ENST00000360001 CAPSQ13938 189 aa25.41■■□□□ 1.66
SDF4-202ENST00000360001 PRPF31Q8WWY3 499 aaKnown RBP25.41■■□□□ 1.66
SDF4-202ENST00000360001 COL1A2P08123 1366 aa25.41■■□□□ 1.66
SDF4-202ENST00000360001 AKR1A1P14550 325 aa25.4■■□□□ 1.66
SDF4-202ENST00000360001 ABCD1P33897 745 aa25.4■■□□□ 1.66
SDF4-202ENST00000360001 CYP2J2P51589 502 aa25.4■■□□□ 1.66
SDF4-202ENST00000360001 ZBTB10Q96DT7 871 aa25.4■■□□□ 1.66
SDF4-202ENST00000360001 BORCS6Q96GS4 357 aa25.4■■□□□ 1.66
SDF4-202ENST00000360001 ARMCX3Q9UH62 379 aaPredicted RBP25.4■■□□□ 1.66
SDF4-202ENST00000360001 LRRIQ4A6NIV6 560 aa25.4■■□□□ 1.66
SDF4-202ENST00000360001 ESPNB1AK53 854 aa25.4■■□□□ 1.66
SDF4-202ENST00000360001 EPB41P11171 864 aaKnown RBP25.4■■□□□ 1.66
SDF4-202ENST00000360001 SCP2P22307 547 aa25.4■■□□□ 1.66
SDF4-202ENST00000360001 DEPTORQ8TB45 409 aa25.4■■□□□ 1.66
SDF4-202ENST00000360001 PSPC1Q8WXF1 523 aaKnown RBP25.4■■□□□ 1.66
SDF4-202ENST00000360001 MKNK1Q9BUB5 465 aa25.4■■□□□ 1.66
SDF4-202ENST00000360001 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.4■■□□□ 1.66
SDF4-202ENST00000360001 ANKRD63C9JTQ0 380 aa25.39■■□□□ 1.66
SDF4-202ENST00000360001 SFPQP23246 707 aaKnown RBP eCLIP25.39■■□□□ 1.662e-6■■■□□ 17.6
SDF4-202ENST00000360001 PSMC2P35998 433 aaKnown RBP25.39■■□□□ 1.66
SDF4-202ENST00000360001 IGBP1P78318 339 aa25.39■■□□□ 1.66
SDF4-202ENST00000360001 GOLGA8FQ08AF8 430 aa25.39■■□□□ 1.66
SDF4-202ENST00000360001 GOLGA8DPQ0D2H9 430 aa25.39■■□□□ 1.66
SDF4-202ENST00000360001 FKBP15Q5T1M5 1219 aa25.39■■□□□ 1.66
SDF4-202ENST00000360001 CD99L2Q8TCZ2 262 aa25.39■■□□□ 1.66
SDF4-202ENST00000360001 ERGIC2Q96RQ1 377 aa25.39■■□□□ 1.66
SDF4-202ENST00000360001 CBWD1Q9BRT8 395 aa25.39■■□□□ 1.66
SDF4-202ENST00000360001 AP5M1Q9H0R1 490 aa25.39■■□□□ 1.66
SDF4-202ENST00000360001 METTL14Q9HCE5 456 aaKnown RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms