RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 ZDHHC5Q9C0B5 715 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 OXSMQ9NWU1 459 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 SIRT5Q9NXA8 310 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 H2AFY2Q9P0M6 372 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 XPO7Q9UIA9 1087 aaKnown RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 GDF2Q9UK05 429 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 AXIN2Q9Y2T1 843 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 ZSWIM8A7E2V4 1837 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 SMG6Q86US8 1419 aaKnown RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 CCDC141Q6ZP82 1450 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 C17orf100A8MU93 164 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 FAM227AF5H4B4 570 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 H7C0S8 307 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 IPO5O00410 1097 aaKnown RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 ADAM11O75078 769 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 SKAP2O75563 359 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 SEC24BO95487 1268 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 SMCPP49901 116 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 CACNB2Q08289 660 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 LBRQ14739 615 aaKnown RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 NCAPG2Q86XI2 1143 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 BRSK2Q8IWQ3 736 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 UNC45AQ9H3U1 944 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 VSX1Q9NZR4 365 aaPredicted RBP2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 CBLCQ9ULV8 474 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 PCDHGB2Q9Y5G2 931 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 PCDHGA5Q9Y5G8 931 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 PCDHGA1Q9Y5H4 931 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 ST14Q9Y5Y6 855 aa2.29□□□□□ -2.04
SMARCAD1-202ENST00000359052 SSC5DA1L4H1 1573 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 PIK3C2GO75747 1445 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 FMN1Q68DA7 1419 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 IREB2P48200 963 aaKnown RBP2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 DNM1Q05193 864 aaKnown RBP2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 TMC5Q6UXY8 1006 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 SDCCAG3Q96C92 435 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 PDLIM5Q96HC4 596 aaKnown RBP2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 RIPOR3Q96MK2 946 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 ZFYVE21Q9BQ24 234 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 AARSD1Q9BTE6 412 aaKnown RBP2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 MAN1C1Q9NR34 630 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 MTRRQ9UBK8 725 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 TCEAL9Q9UHQ7 104 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 HDAC5Q9UQL6 1122 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 PARP3Q9Y6F1 533 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 SPAG6O75602 509 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 CST3P01034 146 aaPredicted RBP2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 ALDH2P05091 517 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 PARP1P09874 1014 aaKnown RBP2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 IFNAR1P17181 557 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 PTPRAP18433 802 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 SSRP1Q08945 709 aaKnown RBP2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 FZD5Q13467 585 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 IDI1Q13907 227 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 TRIM14Q14142 442 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 PSAPL1Q6NUJ1 521 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 MOGAT3Q86VF5 341 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 FAM90A1Q86YD7 464 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 PPP1R35Q8TAP8 253 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 SYTL5Q8TDW5 730 aaPredicted RBP2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 RMDN3Q96TC7 470 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 KATNAL1Q9BW62 490 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 UBXN6Q9BZV1 441 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 NOB1Q9ULX3 412 aaKnown RBP2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 CEP131Q9UPN4 1083 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 SCN7AQ01118 1682 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 MYH7P12883 1935 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 BCL9LQ86UU0 1499 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 A0A096LPE4 126 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 A0A1W2PPZ6 126 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 ARHGAP6O43182 974 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 HTRA2O43464 458 aaPredicted RBP2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 HTATSF1O43719 755 aaKnown RBP2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 TADA3O75528 432 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 OFD1O75665 1012 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 ARNTP27540 789 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 SEPHS1P49903 392 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 PTP4A2Q12974 167 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 CCNG2Q16589 344 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 ATP2B3Q16720 1220 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 USP45Q70EL2 814 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 TAS1R1Q7RTX1 841 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 TTC30AQ86WT1 665 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 DCAF11Q8TEB1 546 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 RSC1A1Q92681 617 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 GATA6Q92908 595 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 ATG3Q9NT62 314 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 SACM1LQ9NTJ5 587 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 SERTAD1Q9UHV2 236 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 GABRQQ9UN88 632 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 NPC1L1Q9UHC9 1359 aa2.28□□□□□ -2.04
SMARCAD1-202ENST00000359052 SEC24DO94855 1032 aaPredicted RBP2.28□□□□□ -2.05
SMARCAD1-202ENST00000359052 DHRS4L1P0CG22 281 aa2.28□□□□□ -2.05
SMARCAD1-202ENST00000359052 CKBP12277 381 aa2.28□□□□□ -2.05
SMARCAD1-202ENST00000359052 NID1P14543 1247 aa2.28□□□□□ -2.05
SMARCAD1-202ENST00000359052 NEXNQ0ZGT2 675 aa2.28□□□□□ -2.05
SMARCAD1-202ENST00000359052 SLC45A4Q5BKX6 768 aa2.28□□□□□ -2.05
SMARCAD1-202ENST00000359052 VPS37DQ86XT2 251 aa2.28□□□□□ -2.05
SMARCAD1-202ENST00000359052 TMEM52Q8NDY8 209 aa2.28□□□□□ -2.05
SMARCAD1-202ENST00000359052 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.28□□□□□ -2.052e-7■■■■■ 33.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms