RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 PFKFB2O60825 505 aa21.8■■□□□ 1.08
ITGA4-202ENST00000339307 STBD1O95210 358 aa21.8■■□□□ 1.08
ITGA4-202ENST00000339307 PLA2G5P39877 138 aa21.8■■□□□ 1.08
ITGA4-202ENST00000339307 QARSP47897 775 aaKnown RBP21.8■■□□□ 1.08
ITGA4-202ENST00000339307 ANKRD1Q15327 319 aa21.8■■□□□ 1.08
ITGA4-202ENST00000339307 TWF2Q6IBS0 349 aaKnown RBP21.8■■□□□ 1.08
ITGA4-202ENST00000339307 PDE12Q6L8Q7 609 aaKnown RBP21.8■■□□□ 1.08
ITGA4-202ENST00000339307 B3GNT9Q6UX72 402 aa21.8■■□□□ 1.08
ITGA4-202ENST00000339307 ANO5Q75V66 913 aa21.8■■□□□ 1.08
ITGA4-202ENST00000339307 KSR1Q8IVT5 923 aa21.8■■□□□ 1.08
ITGA4-202ENST00000339307 OXER1Q8TDS5 423 aa21.8■■□□□ 1.08
ITGA4-202ENST00000339307 WASF1Q92558 559 aa21.8■■□□□ 1.08
ITGA4-202ENST00000339307 FAM20AQ96MK3 541 aa21.8■■□□□ 1.08
ITGA4-202ENST00000339307 INO80BQ9C086 356 aaPredicted RBP21.8■■□□□ 1.08
ITGA4-202ENST00000339307 RNF19AQ9NV58 838 aa21.8■■□□□ 1.08
ITGA4-202ENST00000339307 PIN4Q9Y237 131 aaKnown RBP21.8■■□□□ 1.08
ITGA4-202ENST00000339307 DKC1O60832 514 aaKnown RBP eCLIP21.79■■□□□ 1.08
ITGA4-202ENST00000339307 MAFO75444 373 aaPredicted RBP21.79■■□□□ 1.08
ITGA4-202ENST00000339307 GLP2RO95838 553 aa21.79■■□□□ 1.08
ITGA4-202ENST00000339307 EOMESO95936 686 aa21.79■■□□□ 1.08
ITGA4-202ENST00000339307 GCFC2P16383 781 aaKnown RBP21.79■■□□□ 1.08
ITGA4-202ENST00000339307 AK2P54819 239 aa21.79■■□□□ 1.08
ITGA4-202ENST00000339307 CLLU1OSQ5K130 101 aa21.79■■□□□ 1.08
ITGA4-202ENST00000339307 NCAPH2Q6IBW4 605 aa21.79■■□□□ 1.08
ITGA4-202ENST00000339307 LLGL2Q6P1M3 1020 aa21.79■■□□□ 1.08
ITGA4-202ENST00000339307 TMC7Q7Z402 723 aa21.79■■□□□ 1.08
ITGA4-202ENST00000339307 CEP170P1Q96L14 293 aa21.79■■□□□ 1.08
ITGA4-202ENST00000339307 JPH2Q9BR39 696 aaPredicted RBP21.79■■□□□ 1.08
ITGA4-202ENST00000339307 CYP26B1Q9NR63 512 aa21.79■■□□□ 1.08
ITGA4-202ENST00000339307 CHST12Q9NRB3 414 aa21.79■■□□□ 1.08
ITGA4-202ENST00000339307 BMP2KQ9NSY1 1161 aaPredicted RBP21.79■■□□□ 1.08
ITGA4-202ENST00000339307 SPG21Q9NZD8 308 aa21.79■■□□□ 1.08
ITGA4-202ENST00000339307 STK36Q9NRP7 1315 aa21.78■■□□□ 1.08
ITGA4-202ENST00000339307 EYA4O95677 639 aa21.78■■□□□ 1.08
ITGA4-202ENST00000339307 SRGAP2BP0DMP2 458 aa21.78■■□□□ 1.08
ITGA4-202ENST00000339307 PPM1AP35813 382 aa21.78■■□□□ 1.08
ITGA4-202ENST00000339307 POLGP54098 1239 aaPredicted RBP21.78■■□□□ 1.08
ITGA4-202ENST00000339307 NPEPPSP55786 919 aa21.78■■□□□ 1.08
ITGA4-202ENST00000339307 PLCB3Q01970 1234 aa21.78■■□□□ 1.08
ITGA4-202ENST00000339307 COASYQ13057 564 aa21.78■■□□□ 1.08
ITGA4-202ENST00000339307 PPP2R5CQ13362 524 aa21.78■■□□□ 1.08
ITGA4-202ENST00000339307 PPP4R3AQ6IN85 833 aa21.78■■□□□ 1.08
ITGA4-202ENST00000339307 CATSPER4Q7RTX7 472 aa21.78■■□□□ 1.08
ITGA4-202ENST00000339307 NECAB1Q8N987 351 aa21.78■■□□□ 1.08
ITGA4-202ENST00000339307 SMRP1Q8NCR6 262 aa21.78■■□□□ 1.08
ITGA4-202ENST00000339307 SLC7A3Q8WY07 619 aa21.78■■□□□ 1.08
ITGA4-202ENST00000339307 CDCA3Q99618 268 aaPredicted RBP21.78■■□□□ 1.08
ITGA4-202ENST00000339307 NAP1L4Q99733 375 aaKnown RBP21.78■■□□□ 1.08
ITGA4-202ENST00000339307 BRMS1Q9HCU9 246 aa21.78■■□□□ 1.08
ITGA4-202ENST00000339307 MUTYHQ9UIF7 546 aa21.78■■□□□ 1.08
ITGA4-202ENST00000339307 LZTS1Q9Y250 596 aa21.78■■□□□ 1.08
ITGA4-202ENST00000339307 USP15Q9Y4E8 981 aaPredicted RBP21.78■■□□□ 1.08
ITGA4-202ENST00000339307 IGKV6-21A0A0C4DH24 114 aa21.77■■□□□ 1.08
ITGA4-202ENST00000339307 NT5C1B-RDH14C9J2C7 533 aa21.77■■□□□ 1.08
ITGA4-202ENST00000339307 BAG4O95429 457 aaKnown RBP21.77■■□□□ 1.08
ITGA4-202ENST00000339307 P4HBP07237 508 aaKnown RBP21.77■■□□□ 1.08
ITGA4-202ENST00000339307 ALDH7A1P49419 539 aaKnown RBP21.77■■□□□ 1.08
ITGA4-202ENST00000339307 FOSBP53539 338 aa21.77■■□□□ 1.08
ITGA4-202ENST00000339307 DUSP6Q16828 381 aa21.77■■□□□ 1.08
ITGA4-202ENST00000339307 ZNF410Q86VK4 478 aa21.77■■□□□ 1.08
ITGA4-202ENST00000339307 RNF135Q8IUD6 432 aa21.77■■□□□ 1.08
ITGA4-202ENST00000339307 LPPQ93052 612 aa21.77■■□□□ 1.08
ITGA4-202ENST00000339307 CEP89Q96ST8 783 aa21.77■■□□□ 1.08
ITGA4-202ENST00000339307 APOL5Q9BWW9 433 aa21.77■■□□□ 1.08
ITGA4-202ENST00000339307 KCNMB3Q9NPA1 279 aa21.77■■□□□ 1.08
ITGA4-202ENST00000339307 VAV3Q9UKW4 847 aa21.77■■□□□ 1.08
ITGA4-202ENST00000339307 FSD2A1L4K1 749 aa21.76■■□□□ 1.07
ITGA4-202ENST00000339307 FSCN2O14926 492 aa21.76■■□□□ 1.07
ITGA4-202ENST00000339307 SRGAP2CP0DJJ0 459 aa21.76■■□□□ 1.07
ITGA4-202ENST00000339307 KRT2P35908 639 aa21.76■■□□□ 1.07
ITGA4-202ENST00000339307 TECP42680 631 aa21.76■■□□□ 1.07
ITGA4-202ENST00000339307 POTEDQ86YR6 584 aa21.76■■□□□ 1.07
ITGA4-202ENST00000339307 RPGRIP1Q96KN7 1286 aa21.76■■□□□ 1.07
ITGA4-202ENST00000339307 MRPL9Q9BYD2 267 aaKnown RBP21.76■■□□□ 1.07
ITGA4-202ENST00000339307 NGRNQ9NPE2 291 aaKnown RBP21.76■■□□□ 1.07
ITGA4-202ENST00000339307 INPP5FQ9Y2H2 1132 aa21.76■■□□□ 1.07
ITGA4-202ENST00000339307 HIDE1A8MVS5 230 aa21.75■■□□□ 1.07
ITGA4-202ENST00000339307 CTDNEP1O95476 244 aa21.75■■□□□ 1.07
ITGA4-202ENST00000339307 PHKA2P46019 1235 aa21.75■■□□□ 1.07
ITGA4-202ENST00000339307 ANAPC15P60006 121 aa21.75■■□□□ 1.07
ITGA4-202ENST00000339307 ZNF598Q86UK7 904 aaKnown RBP21.75■■□□□ 1.07
ITGA4-202ENST00000339307 ZNF579Q8NAF0 562 aaKnown RBP21.75■■□□□ 1.07
ITGA4-202ENST00000339307 TMEM87AQ8NBN3 555 aa21.75■■□□□ 1.07
ITGA4-202ENST00000339307 VN1R2Q8NFZ6 395 aa21.75■■□□□ 1.07
ITGA4-202ENST00000339307 TMEM143Q96AN5 459 aa21.75■■□□□ 1.07
ITGA4-202ENST00000339307 LXNQ9BS40 222 aa21.75■■□□□ 1.07
ITGA4-202ENST00000339307 RGL1Q9NZL6 768 aa21.75■■□□□ 1.07
ITGA4-202ENST00000339307 COL4A3BPQ9Y5P4 624 aa21.75■■□□□ 1.07
ITGA4-202ENST00000339307 ZC3H11AO75152 810 aaKnown RBP eCLIP21.74■■□□□ 1.07
ITGA4-202ENST00000339307 SKIP12755 728 aa21.74■■□□□ 1.07
ITGA4-202ENST00000339307 ATF7P17544 494 aaPredicted RBP21.74■■□□□ 1.07
ITGA4-202ENST00000339307 BCAR1P56945 870 aa21.74■■□□□ 1.07
ITGA4-202ENST00000339307 CYP4A11Q02928 519 aa21.74■■□□□ 1.07
ITGA4-202ENST00000339307 RNASELQ05823 741 aaKnown RBP21.74■■□□□ 1.07
ITGA4-202ENST00000339307 NR5A1Q13285 461 aa21.74■■□□□ 1.07
ITGA4-202ENST00000339307 CTTNQ14247 550 aaKnown RBP21.74■■□□□ 1.07
ITGA4-202ENST00000339307 BMS1Q14692 1282 aaKnown RBP21.74■■□□□ 1.07
ITGA4-202ENST00000339307 EPHA7Q15375 998 aa21.74■■□□□ 1.07
ITGA4-202ENST00000339307 EARS2Q5JPH6 523 aaKnown RBP21.74■■□□□ 1.07
ITGA4-202ENST00000339307 OTUD6AQ7L8S5 288 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms