RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 MRPS9P82933 396 aaKnown RBP17.2■□□□□ 0.34
NPHP3-201ENST00000337331 TXNRD1Q16881 649 aa17.2■□□□□ 0.34
NPHP3-201ENST00000337331 CC2D2BQ6DHV5 1058 aa17.2■□□□□ 0.34
NPHP3-201ENST00000337331 CLEC4GQ6UXB4 293 aa17.2■□□□□ 0.34
NPHP3-201ENST00000337331 ANO3Q9BYT9 981 aa17.2■□□□□ 0.34
NPHP3-201ENST00000337331 MMADHCQ9H3L0 296 aaPredicted RBP17.2■□□□□ 0.34
NPHP3-201ENST00000337331 LMTK2Q8IWU2 1503 aa17.2■□□□□ 0.34
NPHP3-201ENST00000337331 DPPA5A6NC42 116 aa17.2■□□□□ 0.34
NPHP3-201ENST00000337331 PLEKP08567 350 aaPredicted RBP17.2■□□□□ 0.34
NPHP3-201ENST00000337331 P4HA1P13674 534 aa17.2■□□□□ 0.34
NPHP3-201ENST00000337331 HOXA13P31271 388 aaPredicted RBP17.2■□□□□ 0.34
NPHP3-201ENST00000337331 RAB27AP51159 221 aa17.2■□□□□ 0.34
NPHP3-201ENST00000337331 XRCC4Q13426 336 aa17.2■□□□□ 0.34
NPHP3-201ENST00000337331 SGO2Q562F6 1265 aa17.2■□□□□ 0.34
NPHP3-201ENST00000337331 HPSEQ9Y251 543 aa17.2■□□□□ 0.34
NPHP3-201ENST00000337331 SUPT3HO75486 399 aa17.2■□□□□ 0.34
NPHP3-201ENST00000337331 TGS1Q96RS0 853 aaKnown RBP17.2■□□□□ 0.34
NPHP3-201ENST00000337331 CARD9Q9H257 536 aa17.2■□□□□ 0.34
NPHP3-201ENST00000337331 TPD52P55327 224 aaPredicted RBP17.19■□□□□ 0.34
NPHP3-201ENST00000337331 TRIM28Q13263 835 aaKnown RBP17.19■□□□□ 0.34
NPHP3-201ENST00000337331 KRT81Q14533 505 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 BBOF1Q8ND07 529 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 MAGEC3Q8TD91 643 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 CNKSR1Q969H4 720 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 SH3GLB2Q9NR46 395 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 ZNF609O15014 1411 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 CLTCQ00610 1675 aaKnown RBP17.19■□□□□ 0.34
NPHP3-201ENST00000337331 GYG2O15488 501 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 STAM2O75886 525 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 FGGP02679 453 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 BMP6P22004 513 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 KLK7P49862 253 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 PMS2P54278 862 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 BRDTQ58F21 947 aaPredicted RBP17.19■□□□□ 0.34
NPHP3-201ENST00000337331 PI4KBQ9UBF8 816 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 DBR1Q9UK59 544 aaKnown RBP17.19■□□□□ 0.34
NPHP3-201ENST00000337331 RCAN1P53805 252 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 STAG2Q8N3U4 1231 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 PRPF31Q8WWY3 499 aaKnown RBP17.19■□□□□ 0.34
NPHP3-201ENST00000337331 ERP27Q96DN0 273 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 GGA2Q9UJY4 613 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 CAMSAP1Q5T5Y3 1602 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 TNNC2P02585 160 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 GRAPQ13588 217 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 TAF12Q16514 161 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 GRAPLQ8TC17 118 aaPredicted RBP17.19■□□□□ 0.34
NPHP3-201ENST00000337331 MIS12Q9H081 205 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 ABCF3Q9NUQ8 709 aa17.19■□□□□ 0.34
NPHP3-201ENST00000337331 FBXO2Q9UK22 296 aaPredicted RBP17.19■□□□□ 0.34
NPHP3-201ENST00000337331 DNAJC6O75061 913 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 PIK3CAP42336 1068 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 DR1Q01658 176 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 ITGB3BPQ13352 177 aaPredicted RBP17.18■□□□□ 0.34
NPHP3-201ENST00000337331 PPP2R5CQ13362 524 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 ACCSQ96QU6 501 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 MTRQ99707 1265 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 PCDHB4Q9Y5E5 795 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 PALLDQ8WX93 1383 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 USP17L5A8MUK1 530 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 ATP6V1G1O75348 118 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 ATP5HO75947 161 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 BRINP3Q76B58 766 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 PIP4K2CQ8TBX8 421 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 TATDN2Q93075 761 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 USP31Q70CQ4 1352 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 TULP4Q9NRJ4 1543 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 ECEL1O95672 775 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 CACNA2D1P54289 1103 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 CTTNQ14247 550 aaKnown RBP17.18■□□□□ 0.34
NPHP3-201ENST00000337331 CREG2Q8IUH2 290 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 MAB21L3Q8N8X9 362 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 PIGOQ8TEQ8 1089 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 ATP6V0A1Q93050 837 aa17.18■□□□□ 0.34
NPHP3-201ENST00000337331 DHX36Q9H2U1 1008 aaKnown RBP17.18■□□□□ 0.34
NPHP3-201ENST00000337331 ATXN2Q99700 1313 aaKnown RBP17.18■□□□□ 0.34
NPHP3-201ENST00000337331 TTI1O43156 1089 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 SNAP25P60880 206 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 CDR2Q01850 454 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 C10orf76Q5T2E6 689 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 CEP170P1Q96L14 293 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 WDR91A4D1P6 747 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 USP17L15C9J2P7 530 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 USP17L13C9JLJ4 530 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 USP17L11C9JVI0 530 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 USP17L18D6R9N7 530 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 USP17L22D6RA61 530 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 USP17L17D6RBQ6 530 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 USP17L19D6RCP7 530 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 USP17L20D6RJB6 530 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 TRPA1O75762 1119 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 PPM1FP49593 454 aaPredicted RBP17.17■□□□□ 0.34
NPHP3-201ENST00000337331 STAT2P52630 851 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 USP17L24Q0WX57 530 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 SYDE2Q5VT97 1194 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 USP17L6PQ6QN14 398 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 KMT5AQ9NQR1 393 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 SEPT9Q9UHD8 586 aaPredicted RBP17.17■□□□□ 0.34
NPHP3-201ENST00000337331 NOD1Q9Y239 953 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 CCDC188H7C350 402 aa17.17■□□□□ 0.34
NPHP3-201ENST00000337331 BRAFP15056 766 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms