RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 EPHA7Q15375 998 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 SUPT20HL1Q3ZLR7 823 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 HNRNPLLQ8WVV9 542 aaKnown RBP16.86■□□□□ 0.29
HDAC5-202ENST00000336057 DCPSQ96C86 337 aaKnown RBP16.86■□□□□ 0.29
HDAC5-202ENST00000336057 ERGIC2Q96RQ1 377 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 TUBB6Q9BUF5 446 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 SRGAP2CP0DJJ0 459 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 PDHBP11177 359 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 UCHL3P15374 230 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 CD44P16070 742 aaKnown RBP16.86■□□□□ 0.29
HDAC5-202ENST00000336057 EDRF1Q3B7T1 1238 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 TMEM35BQ8NCS4 154 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 TBC1D16Q8TBP0 767 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 RNPC3Q96LT9 517 aaKnown RBP16.86■□□□□ 0.29
HDAC5-202ENST00000336057 FAM213AQ9BRX8 229 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 TUFT1Q9NNX1 390 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 MYO3BQ8WXR4 1341 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 CASQ2O14958 399 aaPredicted RBP16.86■□□□□ 0.29
HDAC5-202ENST00000336057 SAT1P21673 171 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 DHX34Q14147 1143 aaKnown RBP16.86■□□□□ 0.29
HDAC5-202ENST00000336057 CCDC137Q6PK04 289 aaKnown RBP16.86■□□□□ 0.29
HDAC5-202ENST00000336057 SMIM5Q71RC9 77 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 C11orf70Q9BRQ4 267 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 NACA2Q9H009 215 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 RAVER2Q9HCJ3 691 aaKnown RBP16.86■□□□□ 0.29
HDAC5-202ENST00000336057 WDR91A4D1P6 747 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 PSMA2P25787 234 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 SMARCA1P28370 1054 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 SFNP31947 248 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 NCAPHQ15003 741 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 NTRK3Q16288 839 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 EEPD1Q7L9B9 569 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 PFDN4Q9NQP4 134 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 HPCAL4Q9UM19 191 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 SPATA31D1Q6ZQQ2 1576 aa16.86■□□□□ 0.29
HDAC5-202ENST00000336057 RASA4BC9J798 803 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 MAPK13O15264 365 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 RASA4O43374 803 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 KLK7P49862 253 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 SPARCL1Q14515 664 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 CEP55Q53EZ4 464 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 CIAPIN1Q6FI81 312 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 TMEM270Q6UE05 265 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 APOL6Q9BWW8 343 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 TACC3Q9Y6A5 838 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 RC3H1Q5TC82 1133 aaKnown RBP16.85■□□□□ 0.29
HDAC5-202ENST00000336057 PDCD7Q8N8D1 485 aaKnown RBP16.85■□□□□ 0.29
HDAC5-202ENST00000336057 ZWILCHQ9H900 591 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 C21orf2O43822 256 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 GABPAQ06546 454 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 CLEC10AQ8IUN9 316 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 TTLL6Q8N841 843 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 AGPAT1Q99943 283 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 GINM1Q9NU53 330 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 IQANK1A0A1B0GTG1 560 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 TBX3O15119 743 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 ARL4AP40617 200 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 FXR2P51116 673 aaKnown RBP eCLIP16.85■□□□□ 0.291e-6■■■■□ 21
HDAC5-202ENST00000336057 HDLBPQ00341 1268 aaKnown RBP16.85■□□□□ 0.29
HDAC5-202ENST00000336057 RPS6KA2Q15349 733 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 PASD1Q8IV76 773 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 REEP2Q9BRK0 252 aa16.85■□□□□ 0.29
HDAC5-202ENST00000336057 RPF1Q9H9Y2 349 aaKnown RBP16.85■□□□□ 0.29
HDAC5-202ENST00000336057 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.85■□□□□ 0.29
HDAC5-202ENST00000336057 FRMD3A2A2Y4 597 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 SLC26A4O43511 780 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 GGPS1O95749 300 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 GUCY1A3Q02108 690 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 NR1H3Q13133 447 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 ZNF394Q53GI3 561 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 SRRM1Q8IYB3 904 aaKnown RBP16.84■□□□□ 0.29
HDAC5-202ENST00000336057 RNF169Q8NCN4 708 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 CCNYQ8ND76 341 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 RBM12Q9NTZ6 932 aaKnown RBP16.84■□□□□ 0.29
HDAC5-202ENST00000336057 MYOM1P52179 1685 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 CLDN3O15551 220 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 H2AFXP16104 143 aaPredicted RBP16.84■□□□□ 0.29
HDAC5-202ENST00000336057 PSMC5P62195 406 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 HAUS6Q7Z4H7 955 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 DAGLBQ8NCG7 672 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 MIPOL1Q8TD10 442 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 HEXIM2Q96MH2 286 aaKnown RBP16.84■□□□□ 0.29
HDAC5-202ENST00000336057 STK33Q9BYT3 514 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 ERVK-24P63145 666 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 TRIM59Q8IWR1 403 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 C7orf31Q8N865 590 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 SAAL1Q96ER3 474 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 ESYT2A0FGR8 921 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 PPP1R37O75864 691 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 SERPINB6P35237 376 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 ARL4CP56559 192 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 ASPHQ12797 758 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 ZNF449Q6P9G9 518 aa16.84■□□□□ 0.29
HDAC5-202ENST00000336057 CHUKO15111 745 aa16.83■□□□□ 0.29
HDAC5-202ENST00000336057 OPHN1O60890 802 aa16.83■□□□□ 0.29
HDAC5-202ENST00000336057 GALCP54803 685 aa16.83■□□□□ 0.29
HDAC5-202ENST00000336057 CASP7P55210 303 aa16.83■□□□□ 0.29
HDAC5-202ENST00000336057 ITPK1Q13572 414 aa16.83■□□□□ 0.29
HDAC5-202ENST00000336057 ZNF667Q5HYK9 610 aa16.83■□□□□ 0.29
HDAC5-202ENST00000336057 SRLQ86TD4 932 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms