RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 NFS1Q9Y697 457 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 IVNS1ABPQ9Y6Y0 642 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 CDK2AP1O14519 115 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 IFNA8P32881 189 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 PFKPQ01813 784 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 MAP3K10Q02779 954 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 COG2Q14746 738 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 TWISTNBQ3B726 338 aaPredicted RBP9.21□□□□□ -0.93
TDP1-201ENST00000335725 TJAP1Q5JTD0 557 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 LMBRD2Q68DH5 695 aaPredicted RBP9.21□□□□□ -0.93
TDP1-201ENST00000335725 NIPAL1Q6NVV3 410 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 ARHGEF18Q6ZSZ5 1173 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 RFPL4BQ6ZWI9 263 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 ACAD11Q709F0 780 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 PDZD8Q8NEN9 1154 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 TLCD1Q96CP7 247 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 CTRCQ99895 268 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 SHCBP1LQ9BZQ2 653 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 CCSER1Q9C0I3 900 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 GPR108Q9NPR9 543 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 MTRF1LQ9UGC7 380 aaKnown RBP9.21□□□□□ -0.93
TDP1-201ENST00000335725 MOSPD1Q9UJG1 213 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 SPG7Q9UQ90 795 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 TELO2Q9Y4R8 837 aa9.21□□□□□ -0.93
TDP1-201ENST00000335725 A0A1W2PQ67 120 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 GOLGA8MH3BSY2 632 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 JAK2O60674 1132 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 ESRRBO95718 433 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 GYPCP04921 128 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 RPL5P46777 297 aaKnown RBP9.21□□□□□ -0.94
TDP1-201ENST00000335725 VPS41P49754 854 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 STAT2P52630 851 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 B2MP61769 119 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 MKRN3Q13064 507 aaKnown RBP9.21□□□□□ -0.94
TDP1-201ENST00000335725 NECTIN1Q15223 517 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 INSCQ1MX18 579 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 HSP90AA4PQ58FG1 418 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 SLC51BQ86UW2 128 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 GALNT6Q8NCL4 622 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 PEX13Q92968 403 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 GRAMD1AQ96CP6 724 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 EHD1Q9H4M9 534 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 TUT1Q9H6E5 874 aaKnown RBP9.21□□□□□ -0.94
TDP1-201ENST00000335725 KLHL3Q9UH77 587 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 CD2APQ9Y5K6 639 aa9.21□□□□□ -0.94
TDP1-201ENST00000335725 SETD1AO15047 1707 aaKnown RBP9.21□□□□□ -0.94
TDP1-201ENST00000335725 SBNO2Q9Y2G9 1366 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 ERVV-2B6SEH9 535 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 RNF113AO15541 343 aaKnown RBP9.2□□□□□ -0.94
TDP1-201ENST00000335725 FYNP06241 537 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 NDUFAF2Q8N183 169 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 UBLCP1Q8WVY7 318 aaPredicted RBP9.2□□□□□ -0.94
TDP1-201ENST00000335725 UTP4Q969X6 686 aaKnown RBP9.2□□□□□ -0.94
TDP1-201ENST00000335725 C10orf88Q9H8K7 445 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 C12orf4Q9NQ89 552 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 METTL5Q9NRN9 209 aaKnown RBP9.2□□□□□ -0.94
TDP1-201ENST00000335725 THAP1Q9NVV9 213 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 STX18Q9P2W9 335 aaKnown RBP9.2□□□□□ -0.94
TDP1-201ENST00000335725 GOLGA8IPA6NC78 632 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 CAPN9O14815 690 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 ZNF254O75437 659 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 SHBGP04278 402 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 M6PRP20645 277 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 TNNC1P63316 161 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 KRT32Q14532 448 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 WDR72Q3MJ13 1102 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 KCTD21Q4G0X4 260 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 SGO2Q562F6 1265 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 SPATA1Q5VX52 437 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 SPOPLQ6IQ16 392 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 SLC4A10Q6U841 1118 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 HACE1Q8IYU2 909 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 PMM1Q92871 262 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 GLMNQ92990 594 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 B3GNT4Q9C0J1 378 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 PHAXQ9H814 394 aaKnown RBP9.2□□□□□ -0.94
TDP1-201ENST00000335725 CAAP1Q9H8G2 361 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 TUBGCP6Q96RT7 1819 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 SNTNA6NMZ2 147 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 TRMUO75648 421 aaKnown RBP9.2□□□□□ -0.94
TDP1-201ENST00000335725 DDHD2O94830 711 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 PIM1P11309 404 aaPredicted RBP9.2□□□□□ -0.94
TDP1-201ENST00000335725 MMP13P45452 471 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 FXR1P51114 621 aaKnown RBP eCLIP9.2□□□□□ -0.94
TDP1-201ENST00000335725 BLVRAP53004 296 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 TGFBIQ15582 683 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 NFE2L2Q16236 605 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 C10orf76Q5T2E6 689 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 TMEM63BQ5T3F8 832 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 C11orf96Q7Z7L8 435 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 MDM1Q8TC05 714 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 NEURL2Q9BR09 285 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 GPATCH1Q9BRR8 931 aaKnown RBP9.2□□□□□ -0.94
TDP1-201ENST00000335725 UBAC1Q9BSL1 405 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 IMPG2Q9BZV3 1241 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 ANKRD2Q9GZV1 360 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 ISCUQ9H1K1 167 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 NDFIP2Q9NV92 336 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 ARMC1Q9NVT9 282 aa9.2□□□□□ -0.94
TDP1-201ENST00000335725 MAP3K20Q9NYL2 800 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms