RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 ZNF445P59923 1031 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 KRT31Q15323 416 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 SLC27A3Q5K4L6 730 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 LRRC31Q6UY01 552 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 BCL2L14Q9BZR8 327 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 HSPBP1Q9NZL4 362 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 PKD2L2Q9NZM6 624 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 V9GYQ6 96 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 BCAMP50895 628 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 SEPT2Q15019 361 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 FBXO18Q8NFZ0 1043 aa17.44■□□□□ 0.38
PTCH1-201ENST00000331920 BTBD18B2RXH4 712 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 SOAT1P35610 550 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 RAD23BP54727 409 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 ALDH6A1Q02252 535 aaKnown RBP17.43■□□□□ 0.38
PTCH1-201ENST00000331920 ZNF790Q6PG37 636 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 MAGEB5Q9BZ81 275 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 EML4Q9HC35 981 aaKnown RBP17.43■□□□□ 0.38
PTCH1-201ENST00000331920 LMBRD1Q9NUN5 540 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 WDR17Q8IZU2 1322 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 ADGRA2Q96PE1 1338 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 PIK3R2O00459 728 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 NUP62P37198 522 aaPredicted RBP17.43■□□□□ 0.38
PTCH1-201ENST00000331920 SYCP2LQ5T4T6 812 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 ANAPC7Q9UJX3 599 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 DYNC1I2Q13409 638 aaKnown RBP17.43■□□□□ 0.38
PTCH1-201ENST00000331920 MCTP2Q6DN12 878 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 YAF2Q8IY57 180 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 IFNL3Q8IZI9 196 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 RMDN1Q96DB5 314 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 GPBP1L1Q9HC44 474 aaPredicted RBP17.43■□□□□ 0.38
PTCH1-201ENST00000331920 CHRNA3P32297 505 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 PDXDC2PQ6P474 469 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 TRPC7Q9HCX4 862 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 EHD2Q9NZN4 543 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 PYGMP11217 842 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 NKX1-1Q15270 411 aaPredicted RBP17.43■□□□□ 0.38
PTCH1-201ENST00000331920 PPM1NQ8N819 430 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 SUCLG2Q96I99 432 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 A0A087WWV3 80 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 SFI1A8K8P3 1242 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 FGGP02679 453 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 SYTL3Q4VX76 610 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 AKIRIN2Q53H80 203 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 SERPING1P05155 500 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 IDI1Q13907 227 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 DCUN1D1Q96GG9 259 aa17.43■□□□□ 0.38
PTCH1-201ENST00000331920 ADD3Q9UEY8 706 aaKnown RBP17.43■□□□□ 0.38
PTCH1-201ENST00000331920 EPB42P16452 691 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 COPB2P35606 906 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 KIZQ2M2Z5 673 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 FANCBQ8NB91 859 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 SCAF11Q99590 1463 aaKnown RBP17.42■□□□□ 0.38
PTCH1-201ENST00000331920 SRGAP2O75044 1071 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 EIF4A3P38919 411 aaKnown RBP17.42■□□□□ 0.38
PTCH1-201ENST00000331920 ARL4CP56559 192 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 SHROOM1Q2M3G4 852 aaPredicted RBP17.42■□□□□ 0.38
PTCH1-201ENST00000331920 TGS1Q96RS0 853 aaKnown RBP17.42■□□□□ 0.38
PTCH1-201ENST00000331920 SPON2Q9BUD6 331 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 AKAP10O43572 662 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 TNKSO95271 1327 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 HMOX2P30519 316 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 CTSWP56202 376 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 HORMAD1Q86X24 394 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 MOCS2O96007 188 aaPredicted RBP17.42■□□□□ 0.38
PTCH1-201ENST00000331920 GCKRQ14397 625 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 MEI1Q5TIA1 1274 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 CCDC81Q6ZN84 652 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 ALG13Q9NP73 1137 aaKnown RBP17.42■□□□□ 0.38
PTCH1-201ENST00000331920 POLE3Q9NRF9 147 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 CDK13Q14004 1512 aaKnown RBP17.42■□□□□ 0.38
PTCH1-201ENST00000331920 GAP43P17677 238 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 RUNX1T1Q06455 604 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 HEATR4Q86WZ0 1026 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 MARCH10Q8NA82 808 aaPredicted RBP17.42■□□□□ 0.38
PTCH1-201ENST00000331920 NSMCE4AQ9NXX6 385 aa17.42■□□□□ 0.38
PTCH1-201ENST00000331920 CCDC151A5D8V7 595 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 RGS5O15539 181 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 TLR2O60603 784 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 FKBP9O95302 570 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 GDF11O95390 407 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 FKBP9P1Q75LS8 142 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 KLHL31Q9H511 634 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 TMEM206Q9H813 350 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 MED23Q9ULK4 1368 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 GYS1P13807 737 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 TMED10P49755 219 aaKnown RBP17.41■□□□□ 0.38
PTCH1-201ENST00000331920 CYP27A1Q02318 531 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 ATP12AP54707 1039 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 RBM6P78332 1123 aaKnown RBP17.41■□□□□ 0.38
PTCH1-201ENST00000331920 SIK2Q9H0K1 926 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 ST13P50502 369 aaKnown RBP17.41■□□□□ 0.38
PTCH1-201ENST00000331920 UXS1Q8NBZ7 420 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 LSG1Q9H089 658 aaKnown RBP17.41■□□□□ 0.38
PTCH1-201ENST00000331920 SGSM2O43147 1006 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 ENO1P06733 434 aaKnown RBP17.41■□□□□ 0.38
PTCH1-201ENST00000331920 RIN3Q8TB24 985 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 FAM162AQ96A26 154 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 C17orf80Q9BSJ5 609 aa17.41■□□□□ 0.38
PTCH1-201ENST00000331920 CTIFO43310 598 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms