RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 FMR1Q06787 632 aaKnown RBP eCLIP18.07■□□□□ 0.481e-7■■■□□ 16.8
LMNB2-201ENST00000325327 CATSPERGQ6ZRH7 1159 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 AGXT2Q9BYV1 514 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 IQCGQ9H095 443 aaKnown RBP18.07■□□□□ 0.48
LMNB2-201ENST00000325327 SETD4Q9NVD3 440 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 SEPT10Q9P0V9 454 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 MTRF1LQ9UGC7 380 aaKnown RBP18.07■□□□□ 0.48
LMNB2-201ENST00000325327 HSF2BPO75031 334 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 TBC1D8O95759 1140 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 ZBED6P86452 979 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 BEX3Q00994 111 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 ITKQ08881 620 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 NSMCE1Q8WV22 266 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 COPS5Q92905 334 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 TSNARE1Q96NA8 513 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 SLC38A10Q9HBR0 1119 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 KIAA1586Q9HCI6 787 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 KLK14Q9P0G3 267 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 PYCARDQ9ULZ3 195 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 GABPAQ06546 454 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 CCDC77Q9BR77 488 aa18.07■□□□□ 0.48
LMNB2-201ENST00000325327 ST3GAL1Q11201 340 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 NOGQ13253 232 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 SH3BP5LQ7L8J4 393 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 RUSC1Q9BVN2 902 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 USP20Q9Y2K6 914 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 PRG3Q9Y2Y8 225 aaPredicted RBP18.06■□□□□ 0.48
LMNB2-201ENST00000325327 EZRP15311 586 aaKnown RBP18.06■□□□□ 0.48
LMNB2-201ENST00000325327 KCNJ6P48051 423 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 DUOXA2Q1HG44 320 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 GLRA4Q5JXX5 417 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 DNAJC24Q6P3W2 148 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 GPD1LQ8N335 351 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 CCDC63Q8NA47 563 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 BBXQ8WY36 941 aaPredicted RBP18.06■□□□□ 0.48
LMNB2-201ENST00000325327 RAB20Q9NX57 234 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 TUBE1Q9UJT0 475 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 AGAP1Q9UPQ3 857 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 STRNO43815 780 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 BNIP3LO60238 219 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 CBX1P83916 185 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 RGS17Q9UGC6 210 aaPredicted RBP18.06■□□□□ 0.48
LMNB2-201ENST00000325327 SNX9Q9Y5X1 595 aa18.06■□□□□ 0.48
LMNB2-201ENST00000325327 ALKBH5Q6P6C2 394 aaKnown RBP18.05■□□□□ 0.48
LMNB2-201ENST00000325327 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.05■□□□□ 0.48
LMNB2-201ENST00000325327 URGCPQ8TCY9 931 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 ATP11BQ9Y2G3 1177 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 TMEM132BQ14DG7 1078 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 UBLCP1Q8WVY7 318 aaPredicted RBP18.05■□□□□ 0.48
LMNB2-201ENST00000325327 CALN1Q9BXU9 219 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 MIS12Q9H081 205 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 CYP26B1Q9NR63 512 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 HSPBP1Q9NZL4 362 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 SAR1BQ9Y6B6 198 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 ANKRD26Q9UPS8 1709 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 PLS3P13797 630 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 CXCR5P32302 372 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 PSMC6P62333 389 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 DYNLT1P63172 113 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 RINT1Q6NUQ1 792 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 ZNF384Q8TF68 577 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 PRPF31Q8WWY3 499 aaKnown RBP18.05■□□□□ 0.48
LMNB2-201ENST00000325327 HAUS4Q9H6D7 363 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 STARD7Q9NQZ5 370 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 FXR2P51116 673 aaKnown RBP eCLIP18.05■□□□□ 0.488e-7■■■□□ 16.9
LMNB2-201ENST00000325327 ALDH5A1P51649 535 aaPredicted RBP18.05■□□□□ 0.48
LMNB2-201ENST00000325327 KRT39Q6A163 491 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 CCDC89Q8N998 374 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 DAGLBQ8NCG7 672 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 TRIM58Q8NG06 486 aa18.05■□□□□ 0.48
LMNB2-201ENST00000325327 A8MXQ7 604 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 ZBTB39O15060 712 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 PQBP1O60828 265 aaKnown RBP18.04■□□□□ 0.48
LMNB2-201ENST00000325327 PGK1P00558 417 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 CFAP221Q4G0U5 840 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 VSTM4Q8IW00 320 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 PPP1R12CQ9BZL4 782 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 SPDYE16A6NNV3 312 aaPredicted RBP18.04■□□□□ 0.48
LMNB2-201ENST00000325327 PTPAQ15257 358 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 CFAP58Q5T655 872 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 TEX2Q8IWB9 1127 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 RNF139Q8WU17 664 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 CGNQ9P2M7 1197 aaKnown RBP18.04■□□□□ 0.48
LMNB2-201ENST00000325327 BZW2Q9Y6E2 419 aaKnown RBP18.04■□□□□ 0.48
LMNB2-201ENST00000325327 FTCDO95954 541 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 TUBB4AP04350 444 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 SUPT20HL2P0C7V6 817 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 CPB1P15086 417 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 CYP11B2P19099 503 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 ABHD16BQ9H3Z7 469 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 ODF2LQ9ULJ1 636 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.04■□□□□ 0.48
LMNB2-201ENST00000325327 TMEM88BA6NKF7 163 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 USP2O75604 605 aaPredicted RBP18.04■□□□□ 0.48
LMNB2-201ENST00000325327 STK10O94804 968 aaKnown RBP18.04■□□□□ 0.48
LMNB2-201ENST00000325327 SP3Q02447 781 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 GRB10Q13322 594 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 MKL1Q969V6 931 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 CEP63Q96MT8 703 aa18.04■□□□□ 0.48
LMNB2-201ENST00000325327 PPANQ9NQ55 473 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms