RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 PHKA2P46019 1235 aa22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 DSC3Q14574 896 aa22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 ZRSR1Q15695 479 aaKnown RBP22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 FAM173BQ6P4H8 233 aa22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 CATSPER4Q7RTX7 472 aa22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 CDK5RAP3Q96JB5 506 aa22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 TGS1Q96RS0 853 aaKnown RBP22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 MMTAG2Q9BU76 263 aaKnown RBP22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 NT5C3AQ9H0P0 336 aa22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 POLR3FQ9H1D9 316 aaPredicted RBP22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 CHST12Q9NRB3 414 aa22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 DACT1Q9NYF0 836 aa22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 PCDHB7Q9Y5E2 793 aa22.04■■□□□ 1.12
HIGD1A-201ENST00000321331 C9IYK1 514 aa22.03■■□□□ 1.12
HIGD1A-201ENST00000321331 DGKIO75912 1065 aa22.03■■□□□ 1.12
HIGD1A-201ENST00000321331 CYP11B2P19099 503 aa22.03■■□□□ 1.12
HIGD1A-201ENST00000321331 POU5F1BQ06416 359 aa22.03■■□□□ 1.12
HIGD1A-201ENST00000321331 MAEAQ7L5Y9 396 aa22.03■■□□□ 1.12
HIGD1A-201ENST00000321331 ARNTL2Q8WYA1 636 aa22.03■■□□□ 1.12
HIGD1A-201ENST00000321331 CERS4Q9HA82 394 aa22.03■■□□□ 1.12
HIGD1A-201ENST00000321331 CLIC4Q9Y696 253 aa22.03■■□□□ 1.12
HIGD1A-201ENST00000321331 MYO9BQ13459 2157 aa22.03■■□□□ 1.12
HIGD1A-201ENST00000321331 COL4A6Q14031 1691 aa22.03■■□□□ 1.12
HIGD1A-201ENST00000321331 E9PMD0 336 aa22.02■■□□□ 1.12
HIGD1A-201ENST00000321331 SLC26A4O43511 780 aa22.02■■□□□ 1.12
HIGD1A-201ENST00000321331 EYA4O95677 639 aa22.02■■□□□ 1.12
HIGD1A-201ENST00000321331 LONP1P36776 959 aaKnown RBP22.02■■□□□ 1.12
HIGD1A-201ENST00000321331 UBA7P41226 1012 aa22.02■■□□□ 1.12
HIGD1A-201ENST00000321331 HYIQ5T013 277 aa22.02■■□□□ 1.12
HIGD1A-201ENST00000321331 FAM102BQ5T8I3 360 aa22.02■■□□□ 1.12
HIGD1A-201ENST00000321331 CRIPAKQ8N1N5 446 aa22.02■■□□□ 1.12
HIGD1A-201ENST00000321331 FIBCD1Q8N539 461 aa22.02■■□□□ 1.12
HIGD1A-201ENST00000321331 ASAP3Q8TDY4 903 aa22.02■■□□□ 1.12
HIGD1A-201ENST00000321331 ELAC1Q9H777 363 aaKnown RBP22.02■■□□□ 1.12
HIGD1A-201ENST00000321331 ADGRA3Q8IWK6 1321 aa22.02■■□□□ 1.12
HIGD1A-201ENST00000321331 GLRA2P23416 452 aa22.01■■□□□ 1.11
HIGD1A-201ENST00000321331 PTENP60484 403 aa22.01■■□□□ 1.11
HIGD1A-201ENST00000321331 ERVK-21P61565 698 aa22.01■■□□□ 1.11
HIGD1A-201ENST00000321331 FAM189BP81408 668 aa22.01■■□□□ 1.11
HIGD1A-201ENST00000321331 CEBPZQ03701 1054 aaKnown RBP22.01■■□□□ 1.11
HIGD1A-201ENST00000321331 CAPSQ13938 189 aa22.01■■□□□ 1.11
HIGD1A-201ENST00000321331 BTG3Q14201 252 aaPredicted RBP22.01■■□□□ 1.11
HIGD1A-201ENST00000321331 PTPAQ15257 358 aa22.01■■□□□ 1.11
HIGD1A-201ENST00000321331 PCBP1Q15365 356 aaKnown RBP eCLIP22.01■■□□□ 1.11
HIGD1A-201ENST00000321331 CABP7Q86V35 215 aa22.01■■□□□ 1.11
HIGD1A-201ENST00000321331 ZNF689Q96CS4 500 aaPredicted RBP22.01■■□□□ 1.11
HIGD1A-201ENST00000321331 SAMD11Q96NU1 681 aa22.01■■□□□ 1.11
HIGD1A-201ENST00000321331 GPRC5CQ9NQ84 441 aa22.01■■□□□ 1.11
HIGD1A-201ENST00000321331 TMEM161AQ9NX61 479 aa22.01■■□□□ 1.11
HIGD1A-201ENST00000321331 PIN4Q9Y237 131 aaKnown RBP22.01■■□□□ 1.11
HIGD1A-201ENST00000321331 ZSCAN22P10073 491 aaPredicted RBP22■■□□□ 1.11
HIGD1A-201ENST00000321331 IFNLR1Q8IU57 520 aaPredicted RBP22■■□□□ 1.11
HIGD1A-201ENST00000321331 CALML4Q96GE6 196 aa22■■□□□ 1.11
HIGD1A-201ENST00000321331 ZNF396Q96N95 335 aaPredicted RBP22■■□□□ 1.11
HIGD1A-201ENST00000321331 USP28Q96RU2 1077 aa22■■□□□ 1.11
HIGD1A-201ENST00000321331 NFKBIZQ9BYH8 718 aa22■■□□□ 1.11
HIGD1A-201ENST00000321331 RC3H2Q9HBD1 1191 aaKnown RBP22■■□□□ 1.11
HIGD1A-201ENST00000321331 MTUS1Q9ULD2 1270 aa22■■□□□ 1.11
HIGD1A-201ENST00000321331 ERLIN2O94905 339 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 NCBP1Q09161 790 aaKnown RBP21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 BECN1Q14457 450 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 TWF2Q6IBS0 349 aaKnown RBP21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 CMTR2Q8IYT2 770 aaKnown RBP21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 RASSF8Q8NHQ8 419 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 PNMA5Q96PV4 448 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 MINDY3Q9H8M7 445 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 AGPAT5Q9NUQ2 364 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 RWDD3Q9Y3V2 267 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 A0A0U1RQF3 1178 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 LRRIQ4A6NIV6 560 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 INO80B-WBP1J3KQ70 363 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 HOXA2O43364 376 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 SKIP12755 728 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 MARCKSP29966 332 aaPredicted RBP21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 GRB10Q13322 594 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 PPP2R5AQ15172 486 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 FOXD4L5Q5VV16 416 aaPredicted RBP21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 SPRED2Q7Z698 418 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 FOXD4L4Q8WXT5 416 aaPredicted RBP21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 KIFAP3Q92845 792 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 C17orf80Q9BSJ5 609 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 TRAIPQ9BWF2 469 aa21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 SRPRBQ9Y5M8 271 aaKnown RBP21.99■■□□□ 1.11
HIGD1A-201ENST00000321331 CHD7Q9P2D1 2997 aa21.98■■□□□ 1.11
HIGD1A-201ENST00000321331 F13A1P00488 732 aa21.98■■□□□ 1.11
HIGD1A-201ENST00000321331 IGFBP4P22692 258 aa21.98■■□□□ 1.11
HIGD1A-201ENST00000321331 GRIN1Q05586 938 aa21.98■■□□□ 1.11
HIGD1A-201ENST00000321331 SLC39A14Q15043 492 aa21.98■■□□□ 1.11
HIGD1A-201ENST00000321331 TMEM119Q4V9L6 283 aa21.98■■□□□ 1.11
HIGD1A-201ENST00000321331 KCNK18Q7Z418 384 aa21.98■■□□□ 1.11
HIGD1A-201ENST00000321331 ECHDC2Q86YB7 292 aa21.98■■□□□ 1.11
HIGD1A-201ENST00000321331 ZBTB8OSQ8IWT0 167 aa21.98■■□□□ 1.11
HIGD1A-201ENST00000321331 IFT74Q96LB3 600 aa21.98■■□□□ 1.11
HIGD1A-201ENST00000321331 PLIN2Q99541 437 aa21.98■■□□□ 1.11
HIGD1A-201ENST00000321331 FBXO2Q9UK22 296 aaPredicted RBP21.98■■□□□ 1.11
HIGD1A-201ENST00000321331 MORC2Q9Y6X9 1032 aaPredicted RBP21.98■■□□□ 1.11
HIGD1A-201ENST00000321331 EPOPA6NHQ4 379 aa21.97■■□□□ 1.11
HIGD1A-201ENST00000321331 RFXAPO00287 272 aa21.97■■□□□ 1.11
HIGD1A-201ENST00000321331 EOMESO95936 686 aa21.97■■□□□ 1.11
HIGD1A-201ENST00000321331 SSBP05455 408 aaKnown RBP eCLIP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms