RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 RNF169Q8NCN4 708 aa20.41■□□□□ 0.86
TMEM88-201ENST00000301599 DYDC2Q96IM9 177 aa20.41■□□□□ 0.86
TMEM88-201ENST00000301599 ZSCAN31Q96LW9 406 aaPredicted RBP20.41■□□□□ 0.86
TMEM88-201ENST00000301599 LXNQ9BS40 222 aa20.41■□□□□ 0.86
TMEM88-201ENST00000301599 CWH43Q9H720 699 aa20.41■□□□□ 0.86
TMEM88-201ENST00000301599 WRAP73Q9P2S5 460 aaPredicted RBP20.41■□□□□ 0.86
TMEM88-201ENST00000301599 FGF18O76093 207 aa20.4■□□□□ 0.86
TMEM88-201ENST00000301599 SLITRK3O94933 977 aa20.4■□□□□ 0.86
TMEM88-201ENST00000301599 CSPG5O95196 566 aa20.4■□□□□ 0.86
TMEM88-201ENST00000301599 IL9P15248 144 aa20.4■□□□□ 0.86
TMEM88-201ENST00000301599 FOSBP53539 338 aa20.4■□□□□ 0.86
TMEM88-201ENST00000301599 XKR9Q5GH70 373 aa20.4■□□□□ 0.86
TMEM88-201ENST00000301599 KSR1Q8IVT5 923 aa20.4■□□□□ 0.86
TMEM88-201ENST00000301599 TPH2Q8IWU9 490 aa20.4■□□□□ 0.86
TMEM88-201ENST00000301599 ZNF579Q8NAF0 562 aaKnown RBP20.4■□□□□ 0.86
TMEM88-201ENST00000301599 PRPF31Q8WWY3 499 aaKnown RBP20.4■□□□□ 0.86
TMEM88-201ENST00000301599 LLPHQ9BRT6 129 aaKnown RBP20.4■□□□□ 0.86
TMEM88-201ENST00000301599 C1QTNF1Q9BXJ1 281 aa20.4■□□□□ 0.86
TMEM88-201ENST00000301599 DHX33Q9H6R0 707 aaKnown RBP20.4■□□□□ 0.86
TMEM88-201ENST00000301599 RNF19AQ9NV58 838 aa20.4■□□□□ 0.86
TMEM88-201ENST00000301599 PUF60Q9UHX1 559 aaKnown RBP20.4■□□□□ 0.86
TMEM88-201ENST00000301599 ASAP2O43150 1006 aa20.39■□□□□ 0.85
TMEM88-201ENST00000301599 SKIP12755 728 aa20.39■□□□□ 0.85
TMEM88-201ENST00000301599 IRS1P35568 1242 aa20.39■□□□□ 0.85
TMEM88-201ENST00000301599 CTTNQ14247 550 aaKnown RBP20.39■□□□□ 0.85
TMEM88-201ENST00000301599 PDE12Q6L8Q7 609 aaKnown RBP20.39■□□□□ 0.85
TMEM88-201ENST00000301599 LRRC55Q6ZSA7 311 aa20.39■□□□□ 0.85
TMEM88-201ENST00000301599 CATSPER4Q7RTX7 472 aa20.39■□□□□ 0.85
TMEM88-201ENST00000301599 ZNF598Q86UK7 904 aaKnown RBP20.39■□□□□ 0.85
TMEM88-201ENST00000301599 TCP11Q8WWU5 503 aa20.39■□□□□ 0.85
TMEM88-201ENST00000301599 NLRP4Q96MN2 994 aa20.39■□□□□ 0.85
TMEM88-201ENST00000301599 EIF2AK1Q9BQI3 630 aaKnown RBP20.39■□□□□ 0.85
TMEM88-201ENST00000301599 TRAIPQ9BWF2 469 aa20.39■□□□□ 0.85
TMEM88-201ENST00000301599 TTC12Q9H892 705 aaPredicted RBP20.39■□□□□ 0.85
TMEM88-201ENST00000301599 COL4A3BPQ9Y5P4 624 aa20.39■□□□□ 0.85
TMEM88-201ENST00000301599 GAS2O43903 313 aaKnown RBP20.38■□□□□ 0.85
TMEM88-201ENST00000301599 GTF2F1P35269 517 aaKnown RBP eCLIP20.38■□□□□ 0.85
TMEM88-201ENST00000301599 TXKP42681 527 aa20.38■□□□□ 0.85
TMEM88-201ENST00000301599 PLCB3Q01970 1234 aa20.38■□□□□ 0.85
TMEM88-201ENST00000301599 CYP4A11Q02928 519 aa20.38■□□□□ 0.85
TMEM88-201ENST00000301599 ST3GAL1Q11201 340 aa20.38■□□□□ 0.85
TMEM88-201ENST00000301599 TWF2Q6IBS0 349 aaKnown RBP20.38■□□□□ 0.85
TMEM88-201ENST00000301599 CCDC83Q8IWF9 413 aa20.38■□□□□ 0.85
TMEM88-201ENST00000301599 GJD3Q8N144 294 aa20.38■□□□□ 0.85
TMEM88-201ENST00000301599 LRRC43Q8N309 656 aa20.38■□□□□ 0.85
TMEM88-201ENST00000301599 PSPC1Q8WXF1 523 aaKnown RBP20.38■□□□□ 0.85
TMEM88-201ENST00000301599 TMEM143Q96AN5 459 aa20.38■□□□□ 0.85
TMEM88-201ENST00000301599 HSD17B14Q9BPX1 270 aa20.38■□□□□ 0.85
TMEM88-201ENST00000301599 TLE6Q9H808 572 aa20.38■□□□□ 0.85
TMEM88-201ENST00000301599 IFT122Q9HBG6 1241 aa20.38■□□□□ 0.85
TMEM88-201ENST00000301599 TLR9Q9NR96 1032 aa20.38■□□□□ 0.85
TMEM88-201ENST00000301599 LZTS1Q9Y250 596 aa20.38■□□□□ 0.85
TMEM88-201ENST00000301599 ZBTB39O15060 712 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 NEMFO60524 1076 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 SRGAP2CP0DJJ0 459 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 PHKA2P46019 1235 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 KRT17Q04695 432 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 DLX2Q07687 328 aaPredicted RBP20.37■□□□□ 0.85
TMEM88-201ENST00000301599 LAMTOR4Q0VGL1 99 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 CLLU1OSQ5K130 101 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 KCNT2Q6UVM3 1135 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 SRGAP1Q7Z6B7 1085 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 ADGRD2Q7Z7M1 963 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 EFHBQ8N7U6 833 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 RSPH1Q8WYR4 309 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 C8orf76Q96K31 380 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 ZNF558Q96NG5 402 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 MTMR9Q96QG7 549 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 CD320Q9NPF0 282 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 TSHZ2Q9NRE2 1034 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 HCSTQ9UBK5 93 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 PRKAG3Q9UGI9 489 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 PIN4Q9Y237 131 aaKnown RBP20.37■□□□□ 0.85
TMEM88-201ENST00000301599 MUC3AQ02505 3323 aa20.37■□□□□ 0.85
TMEM88-201ENST00000301599 LINC01565O15544 149 aa20.36■□□□□ 0.85
TMEM88-201ENST00000301599 ZNF623O75123 536 aa20.36■□□□□ 0.85
TMEM88-201ENST00000301599 LYPLA2O95372 231 aa20.36■□□□□ 0.85
TMEM88-201ENST00000301599 SSTR3P32745 418 aaPredicted RBP20.36■□□□□ 0.85
TMEM88-201ENST00000301599 PPM1AP35813 382 aa20.36■□□□□ 0.85
TMEM88-201ENST00000301599 NRIP1P48552 1158 aa20.36■□□□□ 0.85
TMEM88-201ENST00000301599 ERVFC1P60507 584 aa20.36■□□□□ 0.85
TMEM88-201ENST00000301599 GUCY1B3Q02153 619 aa20.36■□□□□ 0.85
TMEM88-201ENST00000301599 RBM23Q86U06 439 aaKnown RBP20.36■□□□□ 0.85
TMEM88-201ENST00000301599 HELQQ8TDG4 1101 aa20.36■□□□□ 0.85
TMEM88-201ENST00000301599 MRPS27Q92552 414 aaKnown RBP20.36■□□□□ 0.85
TMEM88-201ENST00000301599 MRPL9Q9BYD2 267 aaKnown RBP20.36■□□□□ 0.85
TMEM88-201ENST00000301599 EPHX3Q9H6B9 360 aa20.36■□□□□ 0.85
TMEM88-201ENST00000301599 SH2B1Q9NRF2 756 aaPredicted RBP20.36■□□□□ 0.85
TMEM88-201ENST00000301599 ANKEF1Q9NU02 776 aa20.36■□□□□ 0.85
TMEM88-201ENST00000301599 SPG21Q9NZD8 308 aa20.36■□□□□ 0.85
TMEM88-201ENST00000301599 FNDC1Q4ZHG4 1894 aaPredicted RBP20.36■□□□□ 0.85
TMEM88-201ENST00000301599 XRCC6P12956 609 aaKnown RBP eCLIP20.35■□□□□ 0.85
TMEM88-201ENST00000301599 ATF7P17544 494 aaPredicted RBP20.35■□□□□ 0.85
TMEM88-201ENST00000301599 ATP2B1P20020 1258 aa20.35■□□□□ 0.85
TMEM88-201ENST00000301599 NDUFV1P49821 464 aa20.35■□□□□ 0.85
TMEM88-201ENST00000301599 RAB27AP51159 221 aa20.35■□□□□ 0.85
TMEM88-201ENST00000301599 HMGN5P82970 282 aaKnown RBP20.35■□□□□ 0.85
TMEM88-201ENST00000301599 EMC2Q15006 297 aa20.35■□□□□ 0.85
TMEM88-201ENST00000301599 FERMT3Q86UX7 667 aa20.35■□□□□ 0.85
TMEM88-201ENST00000301599 MTRQ99707 1265 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms