RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 ADCY3O60266 1144 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 PPP6R3Q5H9R7 873 aaPredicted RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 USP33Q8TEY7 942 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 CEP170P1Q96L14 293 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 VIPAS39Q9H9C1 493 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 BLOC1S6Q9UL45 172 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 KPNA7A9QM74 516 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 TRPC1P48995 793 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 SULF1Q8IWU6 871 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 CASP10Q92851 521 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 DONSONQ9NYP3 566 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 ADCY10Q96PN6 1610 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 GOLGA8IPA6NC78 632 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 GOLGA8JA6NMD2 632 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 PRPF4O43172 522 aaKnown RBP eCLIP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 SRGAP2O75044 1071 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 UBE2SQ16763 222 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 LRRC4Q9HBW1 653 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 SYNGAP1Q96PV0 1343 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 TARSL2A2RTX5 802 aaKnown RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 KRT37O76014 449 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 KRT6AP02538 564 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 KRT6BP04259 564 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 HNRNPCP07910 306 aaKnown RBP eCLIP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 KRT6CP48668 564 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 CARSP49589 748 aaKnown RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 EIF4A1P60842 406 aaKnown RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 CYP27A1Q02318 531 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 ANO4Q32M45 955 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 ST13P5Q8NFI4 369 aaPredicted RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 PDCD6IPQ8WUM4 868 aaKnown RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 PANX2Q96RD6 677 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 STX18Q9P2W9 335 aaKnown RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 DIS3Q9Y2L1 958 aaKnown RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 WBP4O75554 376 aaKnown RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 ELF1P32519 619 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 PAGE5Q96GU1 130 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 EPAS1Q99814 870 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 EDEM3Q9BZQ6 932 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 CNGB3Q9NQW8 809 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 DDX28Q9NUL7 540 aaKnown RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 DCTN4Q9UJW0 460 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 TMEM94Q12767 1356 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 PODXLO00592 558 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 SERPINB1P30740 379 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 LAMC2Q13753 1193 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 FBXO18Q8NFZ0 1043 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 CNPY3Q9BT09 278 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 NDST4Q9H3R1 872 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 ZNF229Q9UJW7 825 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 LZTS1Q9Y250 596 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 CLRN2A0PK11 232 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 PRR23AA6NEV1 266 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 CTIFO43310 598 aaKnown RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 ARHGEF40Q8TER5 1519 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 MFAP3LO75121 409 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 MAGOHP61326 146 aaKnown RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 SMAD1Q15797 465 aaKnown RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 KRT39Q6A163 491 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 KIAA1841Q6NSI8 718 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 LRRC8EQ6NSJ5 796 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 RFX8Q6ZV50 586 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 DNAJC10Q8IXB1 793 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 FAM149B1Q96BN6 582 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 IFT43Q96FT9 208 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 CNBD2Q96M20 576 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 MLXIPLQ9NP71 852 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 DKK3Q9UBP4 350 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 ADORA1P30542 326 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 HNRNPH2P55795 449 aaKnown RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 RPS8P62241 208 aaKnown RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 DYNLL1P63167 89 aaKnown RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 RINLQ6ZS11 566 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 PARP9Q8IXQ6 854 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 ZNF496Q96IT1 587 aaPredicted RBP5.92□□□□□ -1.46
CPSF2-201ENST00000298875 NLRP4Q96MN2 994 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 SLC8A2Q9UPR5 921 aa5.92□□□□□ -1.46
CPSF2-201ENST00000298875 CHL1O00533 1208 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ACADSP16219 412 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 C16orf72Q14CZ0 275 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 AARS2Q5JTZ9 985 aaKnown RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 DCPSQ96C86 337 aaKnown RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 PPP1R36Q96LQ0 422 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 HEMGNQ9BXL5 484 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 FAM192AQ9GZU8 254 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ATG3Q9NT62 314 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ABHD10Q9NUJ1 306 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 PTPRMP28827 1452 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 hCG_1984214I3L0E3 225 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 PPEF1O14829 653 aaPredicted RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ZBED6P86452 979 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ZNF713Q8N859 430 aaPredicted RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 NSUN7Q8NE18 718 aaKnown RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 PITPNM3Q9BZ71 974 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 CXorf56Q9H5V9 222 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ARIH1Q9Y4X5 557 aaPredicted RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 SAMD9LQ8IVG5 1584 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 E5RI56 91 aa5.91□□□□□ -1.46
CPSF2-201ENST00000298875 ST13P50502 369 aaKnown RBP5.91□□□□□ -1.46
CPSF2-201ENST00000298875 PAPOLAP51003 745 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms