RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 HDAC9Q9UKV0 1011 aa20.54■□□□□ 0.88
SNX4-201ENST00000251775 F8VZ95 297 aa20.54■□□□□ 0.88
SNX4-201ENST00000251775 CYP3A4P08684 503 aa20.54■□□□□ 0.88
SNX4-201ENST00000251775 ITGA4P13612 1032 aa20.54■□□□□ 0.88
SNX4-201ENST00000251775 ZNF76P36508 570 aa20.54■□□□□ 0.88
SNX4-201ENST00000251775 PTK2Q05397 1052 aa20.54■□□□□ 0.88
SNX4-201ENST00000251775 CC2D2BQ6DHV5 1058 aa20.54■□□□□ 0.88
SNX4-201ENST00000251775 DNAAF5Q86Y56 855 aa20.54■□□□□ 0.88
SNX4-201ENST00000251775 MDM1Q8TC05 714 aa20.54■□□□□ 0.88
SNX4-201ENST00000251775 ATP6V0A4Q9HBG4 840 aa20.54■□□□□ 0.88
SNX4-201ENST00000251775 IGLV3-22A0A075B6J6 115 aa20.53■□□□□ 0.88
SNX4-201ENST00000251775 CCDC188H7C350 402 aa20.53■□□□□ 0.88
SNX4-201ENST00000251775 PIK3CDO00329 1044 aa20.53■□□□□ 0.88
SNX4-201ENST00000251775 KRIT1O00522 736 aa20.53■□□□□ 0.88
SNX4-201ENST00000251775 PPIP5K2O43314 1243 aa20.53■□□□□ 0.88
SNX4-201ENST00000251775 SLC8A1P32418 973 aa20.53■□□□□ 0.88
SNX4-201ENST00000251775 DPY19L2P1Q6NXN4 242 aa20.53■□□□□ 0.88
SNX4-201ENST00000251775 ACER1Q8TDN7 264 aa20.53■□□□□ 0.88
SNX4-201ENST00000251775 TLCD1Q96CP7 247 aa20.53■□□□□ 0.88
SNX4-201ENST00000251775 PSMD1Q99460 953 aa20.53■□□□□ 0.88
SNX4-201ENST00000251775 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.53■□□□□ 0.88
SNX4-201ENST00000251775 ACTN1P12814 892 aa20.53■□□□□ 0.88
SNX4-201ENST00000251775 EPS15P42566 896 aa20.53■□□□□ 0.88
SNX4-201ENST00000251775 ELF3P78545 371 aaPredicted RBP20.53■□□□□ 0.88
SNX4-201ENST00000251775 DHX9Q08211 1270 aaKnown RBP20.53■□□□□ 0.88
SNX4-201ENST00000251775 ERMARDQ5T6L9 678 aa20.53■□□□□ 0.88
SNX4-201ENST00000251775 ZNF571Q7Z3V5 609 aaPredicted RBP20.53■□□□□ 0.88
SNX4-201ENST00000251775 SEC14L1Q92503 715 aa20.53■□□□□ 0.88
SNX4-201ENST00000251775 TCP10L2B9ZVM9 353 aa20.52■□□□□ 0.88
SNX4-201ENST00000251775 TTI1O43156 1089 aa20.52■□□□□ 0.88
SNX4-201ENST00000251775 SLC9A1P19634 815 aa20.52■□□□□ 0.88
SNX4-201ENST00000251775 C10orf76Q5T2E6 689 aa20.52■□□□□ 0.88
SNX4-201ENST00000251775 IRF2BP2Q7Z5L9 587 aa20.52■□□□□ 0.88
SNX4-201ENST00000251775 CNKSR1Q969H4 720 aa20.52■□□□□ 0.88
SNX4-201ENST00000251775 CHMP6Q96FZ7 201 aa20.52■□□□□ 0.88
SNX4-201ENST00000251775 XPO6Q96QU8 1125 aaKnown RBP20.52■□□□□ 0.88
SNX4-201ENST00000251775 POLR3CQ9BUI4 534 aaPredicted RBP20.52■□□□□ 0.88
SNX4-201ENST00000251775 COL2A1P02458 1487 aaPredicted RBP20.52■□□□□ 0.88
SNX4-201ENST00000251775 POLD1P28340 1107 aa20.52■□□□□ 0.87
SNX4-201ENST00000251775 STAT2P52630 851 aa20.52■□□□□ 0.87
SNX4-201ENST00000251775 CHADLQ6NUI6 762 aa20.52■□□□□ 0.87
SNX4-201ENST00000251775 FRMD5Q7Z6J6 570 aa20.52■□□□□ 0.87
SNX4-201ENST00000251775 TPCN2Q8NHX9 752 aa20.52■□□□□ 0.87
SNX4-201ENST00000251775 WDR18Q9BV38 432 aa20.52■□□□□ 0.87
SNX4-201ENST00000251775 ARMCX3Q9UH62 379 aaPredicted RBP20.52■□□□□ 0.87
SNX4-201ENST00000251775 RABGAP1Q9Y3P9 1069 aa20.52■□□□□ 0.87
SNX4-201ENST00000251775 STK24Q9Y6E0 443 aa20.52■□□□□ 0.87
SNX4-201ENST00000251775 KIF13BQ9NQT8 1826 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 CCT8L1PA6NM43 557 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 PDXKO00764 312 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 EYA4O95677 639 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 CRYMQ14894 314 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 RASGEF1CQ8N431 466 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 CELF4Q9BZC1 486 aaKnown RBP20.51■□□□□ 0.87
SNX4-201ENST00000251775 FAM129AQ9BZQ8 928 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 SLITRK6Q9H5Y7 841 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 CNOT10Q9H9A5 744 aaKnown RBP20.51■□□□□ 0.87
SNX4-201ENST00000251775 CCDC189A1A4V9 331 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 CLGNO14967 610 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 AKAP3O75969 853 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 ATP6V1G2O95670 118 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 CFBP00751 764 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 KCNA1Q09470 495 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 CTTNQ14247 550 aaKnown RBP20.51■□□□□ 0.87
SNX4-201ENST00000251775 IFI16Q16666 785 aaKnown RBP20.51■□□□□ 0.87
SNX4-201ENST00000251775 PIGOQ8TEQ8 1089 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 CENPTQ96BT3 561 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.51■□□□□ 0.878e-6■■□□□ 11.6
SNX4-201ENST00000251775 NAGPAQ9UK23 515 aa20.51■□□□□ 0.87
SNX4-201ENST00000251775 ASTN1O14525 1302 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 CLRN2A0PK11 232 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 SFI1A8K8P3 1242 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 BMT2Q1RMZ1 405 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 NBPF9Q3BBW0 867 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 ZNF317Q96PQ6 595 aaPredicted RBP20.5■□□□□ 0.87
SNX4-201ENST00000251775 DPH5Q9H2P9 285 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 NOD2Q9HC29 1040 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 HERC5Q9UII4 1024 aaKnown RBP20.5■□□□□ 0.87
SNX4-201ENST00000251775 STXBP5LQ9Y2K9 1186 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 CALUO43852 315 aaPredicted RBP20.5■□□□□ 0.87
SNX4-201ENST00000251775 AFPP02771 609 aaKnown RBP20.5■□□□□ 0.87
SNX4-201ENST00000251775 CASP4P49662 377 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 RINT1Q6NUQ1 792 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 OTOP1Q7RTM1 612 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 CCDC197Q8NCU1 140 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 FAXDC2Q96IV6 333 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 HSD17B14Q9BPX1 270 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 TXLNGYQ9BZA5 131 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 TYW1Q9NV66 732 aaKnown RBP20.5■□□□□ 0.87
SNX4-201ENST00000251775 PNMA2Q9UL42 364 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 SYNPO2Q9UMS6 1093 aa20.5■□□□□ 0.87
SNX4-201ENST00000251775 RBBP6Q7Z6E9 1792 aaKnown RBP20.49■□□□□ 0.87
SNX4-201ENST00000251775 CTNND1O60716 968 aaKnown RBP20.49■□□□□ 0.87
SNX4-201ENST00000251775 CAND2O75155 1236 aa20.49■□□□□ 0.87
SNX4-201ENST00000251775 GCNT3O95395 438 aa20.49■□□□□ 0.87
SNX4-201ENST00000251775 NR3C1P04150 777 aa20.49■□□□□ 0.87
SNX4-201ENST00000251775 CLNS1AP54105 237 aaKnown RBP20.49■□□□□ 0.87
SNX4-201ENST00000251775 HIBCHQ6NVY1 386 aaPredicted RBP20.49■□□□□ 0.87
SNX4-201ENST00000251775 CCDC174Q6PII3 467 aa20.49■□□□□ 0.87
SNX4-201ENST00000251775 SLFN11Q7Z7L1 901 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms