RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 SERTAD1Q9UHV2 236 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 CHD1O14646 1710 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 RPS6KB1P23443 525 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 ICA1Q05084 483 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 ALKBH2Q6NS38 261 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 PCDHB8Q9UN66 801 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 UHRF1BP1LA0JNW5 1464 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 TRIM13O60858 407 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 SEC24BO95487 1268 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 SERPINB3P29508 390 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 ATP8B2P98198 1209 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 CNBD2Q96M20 576 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 DESI2Q9BSY9 194 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 IBTKQ9P2D0 1353 aaPredicted RBP10.93□□□□□ -0.66
SLF2-201ENST00000238961 HIST1H2AGP0C0S8 130 aaPredicted RBP10.93□□□□□ -0.66
SLF2-201ENST00000238961 HIST1H2ADP20671 130 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 TIMM10P62072 90 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 SMAD1Q15797 465 aaKnown RBP10.93□□□□□ -0.66
SLF2-201ENST00000238961 COBLL1Q53SF7 1204 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 CATSPER4Q7RTX7 472 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 ZNF614Q8N883 585 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 HIST1H2AHQ96KK5 128 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 HIST1H2AJQ99878 128 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 SH3GL1Q99961 368 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 H2AFJQ9BTM1 129 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 KIFC1Q9BW19 673 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 ACEP12821 1306 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 KRT6AP02538 564 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 KRT6BP04259 564 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 PDHA1P08559 390 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 CPB1P15086 417 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 PSMC3P17980 439 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 RANBP1P43487 201 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 KRT6CP48668 564 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 HDLBPQ00341 1268 aaKnown RBP10.93□□□□□ -0.66
SLF2-201ENST00000238961 ANKRD40Q6AI12 368 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 PDIK1LQ8N165 341 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 NUP93Q8N1F7 819 aa10.93□□□□□ -0.66
SLF2-201ENST00000238961 RTL3Q8N8U3 475 aaKnown RBP10.93□□□□□ -0.66
SLF2-201ENST00000238961 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.93□□□□□ -0.66
SLF2-201ENST00000238961 A0A087X0T9 212 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 H0Y3Z8 333 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 DYRK3O43781 588 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 TBC1D4O60343 1298 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 CDC40O60508 579 aaKnown RBP eCLIP10.92□□□□□ -0.66
SLF2-201ENST00000238961 PDE8AO60658 829 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 MOCS2O96007 188 aaPredicted RBP10.92□□□□□ -0.66
SLF2-201ENST00000238961 PSMC2P35998 433 aaKnown RBP10.92□□□□□ -0.66
SLF2-201ENST00000238961 RPS7P62081 194 aaKnown RBP10.92□□□□□ -0.66
SLF2-201ENST00000238961 C20orf194Q5TEA3 1177 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 ANKRD13CQ8N6S4 541 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 VPS50Q96JG6 964 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 STN1Q9H668 368 aaKnown RBP10.92□□□□□ -0.66
SLF2-201ENST00000238961 GID8Q9NWU2 228 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 PALD1Q9ULE6 856 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 SRPRBQ9Y5M8 271 aaKnown RBP10.92□□□□□ -0.66
SLF2-201ENST00000238961 FPGT-TNNI3KV9GXZ4 949 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 HPGDP15428 266 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 ARF4P18085 180 aaPredicted RBP10.92□□□□□ -0.66
SLF2-201ENST00000238961 GUCY2CP25092 1073 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 PHKA1P46020 1223 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 SUPT20HL1Q3ZLR7 823 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 MIIPQ5JXC2 388 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 BTBD8Q5XKL5 378 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 TWF2Q6IBS0 349 aaKnown RBP10.92□□□□□ -0.66
SLF2-201ENST00000238961 TBC1D1Q86TI0 1168 aaPredicted RBP10.92□□□□□ -0.66
SLF2-201ENST00000238961 INTS13Q9NVM9 706 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 CACNB2Q08289 660 aaPredicted RBP10.92□□□□□ -0.66
SLF2-201ENST00000238961 PTGDRQ13258 359 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 AKAP4Q5JQC9 854 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 SPICE1Q8N0Z3 855 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 SLC10A4Q96EP9 437 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 XAGE2Q96GT9 111 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 UBE2TQ9NPD8 197 aaPredicted RBP10.92□□□□□ -0.66
SLF2-201ENST00000238961 RPN2P04844 631 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 CHRNA3P32297 505 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 BCAMP50895 628 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 CAMKK1Q8N5S9 505 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 SPATA5Q8NB90 893 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 CCDC51Q96ER9 411 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 HEY1Q9Y5J3 304 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 PRR23AA6NEV1 266 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 GOLGA8MH3BSY2 632 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 CDH2P19022 906 aaPredicted RBP10.92□□□□□ -0.66
SLF2-201ENST00000238961 GTF2E2P29084 291 aaKnown RBP10.92□□□□□ -0.66
SLF2-201ENST00000238961 CNGA2Q16280 664 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 FASTKD1Q53R41 847 aaKnown RBP10.92□□□□□ -0.66
SLF2-201ENST00000238961 PPP1R2P3Q6NXS1 205 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 HORMAD1Q86X24 394 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 PALB2Q86YC2 1186 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 STAG2Q8N3U4 1231 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 RIN3Q8TB24 985 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 FAM81BQ96LP2 452 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 PPP1R36Q96LQ0 422 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 POTEIP0CG38 1075 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 DEFA1P59665 94 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 DEFA3P59666 94 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 AP1B1Q10567 949 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 ZNF438Q7Z4V0 828 aa10.92□□□□□ -0.66
SLF2-201ENST00000238961 STX12Q86Y82 276 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms