RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 RNPC3Q96LT9 517 aaKnown RBP18.38■□□□□ 0.53
SLC1A4-201ENST00000234256 TRIM66O15016 1216 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 UCHL3P15374 230 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 SMAD1Q15797 465 aaKnown RBP18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 ZC2HC1CQ53FD0 456 aaPredicted RBP18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 SNRNP48Q6IEG0 339 aaKnown RBP18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 PRR5LQ6MZQ0 368 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 REEP2Q9BRK0 252 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 PXDNLA1KZ92 1463 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 PSMA2P25787 234 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 SERPINB6P35237 376 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 GALCP54803 685 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 OR2W6PQ8NHA6 318 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 C7orf25Q9BPX7 421 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 FHOD1Q9Y613 1164 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 H0Y3Z8 333 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 CYP26A1O43174 497 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 PRPSAP2O60256 369 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 RAPH1Q70E73 1250 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 LDHDQ86WU2 507 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 AFAP1L2Q8N4X5 818 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 OPHN1O60890 802 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 GSTA1P08263 222 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 GSTA2P09210 222 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 ZSCAN20P17040 1043 aaPredicted RBP18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 KLRC1P26715 233 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 RSRC2Q7L4I2 434 aaKnown RBP18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 TXNRD3Q86VQ6 643 aa18.37■□□□□ 0.53
SLC1A4-201ENST00000234256 CCDC137Q6PK04 289 aaKnown RBP18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 CCNI2Q6ZMN8 369 aaPredicted RBP18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 PCGF5Q86SE9 256 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 HACE1Q8IYU2 909 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 SLC30A5Q8TAD4 765 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 NLRP7Q8WX94 980 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 RFFLQ8WZ73 363 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 TTC17Q96AE7 1141 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 SLC38A10Q9HBR0 1119 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 HPSEQ9Y251 543 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 GMNCA6NCL1 334 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 TTI1O43156 1089 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 TOM1L1O75674 476 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 PLS3P13797 630 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 CHRNA5P30532 468 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 ECE1P42892 770 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 CARSP49589 748 aaKnown RBP18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 ACTN3Q08043 901 aaPredicted RBP18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 ALCAMQ13740 583 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 LINC00116Q8NCU8 138 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.36■□□□□ 0.533e-6■■■■□ 21.3
SLC1A4-201ENST00000234256 HEY1Q9Y5J3 304 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 SH3BP5O60239 455 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 NOL3O60936 208 aaKnown RBP18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 BRAFP15056 766 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 PMS2P54278 862 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 NCAPHQ15003 741 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 CFAP36Q96G28 342 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 GBP5Q96PP8 586 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 WRNIP1Q96S55 665 aa18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 FNDC3AQ9Y2H6 1198 aaKnown RBP18.36■□□□□ 0.53
SLC1A4-201ENST00000234256 A0A0G2JND7 137 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 ERVK-24P63145 666 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 NTRK3Q16288 839 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 SUPT20HL1Q3ZLR7 823 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 SH2D4BQ5SQS7 431 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 PPP1R18Q6NYC8 613 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 RBM43Q6ZSC3 357 aaKnown RBP18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 CENPUQ71F23 418 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 ARMC9Q7Z3E5 817 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 PRPF38AQ8NAV1 312 aaKnown RBP18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 TMEM35BQ8NCS4 154 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 MCPH1Q8NEM0 835 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 MAP3K14Q99558 947 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 TRIM51Q9BSJ1 452 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 ZBED1O96006 694 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 MYBP10242 640 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 ZNF667Q5HYK9 610 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 GGT7Q9UJ14 662 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 HOXA7P31268 230 aaPredicted RBP18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 SOX5P35711 763 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 SLC27A3Q5K4L6 730 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 RASIP1Q5U651 963 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 ATP6V1G3Q96LB4 118 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 EDEM3Q9BZQ6 932 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 LACRTQ9GZZ8 138 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 FIS1Q9Y3D6 152 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 GPC4O75487 556 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 KRT39Q6A163 491 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 DPY19L2Q6NUT2 758 aa18.35■□□□□ 0.53
SLC1A4-201ENST00000234256 PDXKO00764 312 aa18.34■□□□□ 0.53
SLC1A4-201ENST00000234256 EVI5O60447 810 aa18.34■□□□□ 0.53
SLC1A4-201ENST00000234256 EYA4O95677 639 aa18.34■□□□□ 0.53
SLC1A4-201ENST00000234256 PPP2R2AP63151 447 aa18.34■□□□□ 0.53
SLC1A4-201ENST00000234256 PDZD4Q76G19 769 aaPredicted RBP18.34■□□□□ 0.53
SLC1A4-201ENST00000234256 RPF1Q9H9Y2 349 aaKnown RBP18.34■□□□□ 0.53
SLC1A4-201ENST00000234256 TBC1D22BQ9NU19 505 aa18.34■□□□□ 0.53
SLC1A4-201ENST00000234256 ZBTB12Q9Y330 459 aaPredicted RBP18.34■□□□□ 0.53
SLC1A4-201ENST00000234256 ORC2Q13416 577 aaPredicted RBP18.34■□□□□ 0.53
SLC1A4-201ENST00000234256 MTM1Q13496 603 aa18.34■□□□□ 0.53
SLC1A4-201ENST00000234256 MIPOL1Q8TD10 442 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms