RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 KIF19Q2TAC6 998 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.75□□□□□ -1.011e-88■□□□□ 10
APOB-201ENST00000233242 ITIH2P19823 946 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 CCDC137Q6PK04 289 aaKnown RBP8.75□□□□□ -1.01
APOB-201ENST00000233242 SUGP1Q8IWZ8 645 aaKnown RBP8.75□□□□□ -1.01
APOB-201ENST00000233242 ADA2Q9NZK5 511 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 SLC7A3Q8WY07 619 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 ANAPC7Q9UJX3 599 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 PRCPP42785 496 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 NUP107P57740 925 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 TTC39CQ8N584 583 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 CDHR1Q96JP9 859 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 DNAJC12Q9UKB3 198 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 MFSD14BQ5SR56 506 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 KIAA1586Q9HCI6 787 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 KIAA1755Q5JYT7 1200 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 PRMT1Q99873 361 aaKnown RBP8.74□□□□□ -1.01
APOB-201ENST00000233242 SH3GL2Q99962 352 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 FAM192AQ9GZU8 254 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 TTLL1O95922 423 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 PAPOLAP51003 745 aaKnown RBP8.74□□□□□ -1.01
APOB-201ENST00000233242 NLRP11P59045 1033 aaKnown RBP8.74□□□□□ -1.01
APOB-201ENST00000233242 EIF4G3O43432 1585 aaKnown RBP8.74□□□□□ -1.01
APOB-201ENST00000233242 ATP7BP35670 1465 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 WDR64B1ANS9 1081 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 DDIT3P35638 169 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 DYNLT1P63172 113 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 LRRC41Q15345 812 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 ARL13BQ3SXY8 428 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 PTPN21Q16825 1174 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 DDHD1Q8NEL9 900 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 IL17REQ8NFR9 667 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 CATSPER2Q96P56 530 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 FUT8Q9BYC5 575 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 FHOD1Q9Y613 1164 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 TMEM247A6NEH6 219 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 LRRIQ4A6NIV6 560 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 SNUPNO95149 360 aaKnown RBP8.74□□□□□ -1.01
APOB-201ENST00000233242 PYGLP06737 847 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 HSPA1AP0DMV8 641 aaKnown RBP8.74□□□□□ -1.01
APOB-201ENST00000233242 HSPA1BP0DMV9 641 aaKnown RBP8.74□□□□□ -1.01
APOB-201ENST00000233242 NAF1Q96HR8 494 aaKnown RBP8.74□□□□□ -1.01
APOB-201ENST00000233242 TSSK1BQ9BXA7 367 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 ASCC2Q9H1I8 757 aaPredicted RBP8.74□□□□□ -1.01
APOB-201ENST00000233242 DIABLOQ9NR28 239 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 SEL1LQ9UBV2 794 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 IQCA1LA6NCM1 817 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 RSPH10B2B2RC85 870 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 RSPH10BP0C881 870 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 TAP1Q03518 808 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 HIF1AQ16665 826 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 TRAPPC3LQ5T215 181 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 PRUNE1Q86TP1 453 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 ERP27Q96DN0 273 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 GPHNQ9NQX3 736 aaPredicted RBP8.74□□□□□ -1.01
APOB-201ENST00000233242 DGKHQ86XP1 1220 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 ZNF564Q8TBZ8 553 aaPredicted RBP8.74□□□□□ -1.01
APOB-201ENST00000233242 CCT7Q99832 543 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 PSMC3IPQ9P2W1 217 aaPredicted RBP8.74□□□□□ -1.01
APOB-201ENST00000233242 SLC13A4Q9UKG4 626 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 GDAQ9Y2T3 454 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 PHF20L1A8MW92 1017 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 ICA1Q05084 483 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 NCLNQ969V3 563 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 TBX22Q9Y458 520 aa8.74□□□□□ -1.01
APOB-201ENST00000233242 TOM1O60784 492 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 CDR2LQ86X02 465 aaPredicted RBP8.73□□□□□ -1.01
APOB-201ENST00000233242 KMT5AQ9NQR1 393 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.73□□□□□ -1.01
APOB-201ENST00000233242 ADAMTS2O95450 1211 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 PPP1R18Q6NYC8 613 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 ENOSF1Q7L5Y1 443 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 PLD3Q8IV08 490 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 NSL1Q96IY1 281 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 RNPC3Q96LT9 517 aaKnown RBP8.73□□□□□ -1.01
APOB-201ENST00000233242 ASNSD1Q9NWL6 643 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 IP6K2Q9UHH9 426 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 CDK12Q9NYV4 1490 aaPredicted RBP8.73□□□□□ -1.01
APOB-201ENST00000233242 ABCE1P61221 599 aaKnown RBP8.73□□□□□ -1.01
APOB-201ENST00000233242 HORMAD1Q86X24 394 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 CCNYQ8ND76 341 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 MAGEB5Q9BZ81 275 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 ADAM22Q9P0K1 906 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 KIF17Q9P2E2 1029 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 ATP11BQ9Y2G3 1177 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 GTPBP10A4D1E9 387 aaKnown RBP8.73□□□□□ -1.01
APOB-201ENST00000233242 CYP4A11Q02928 519 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 GPS1Q13098 491 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 AP3B2Q13367 1082 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 NAALADL2Q58DX5 795 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 SNX25Q9H3E2 840 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 TLR3O15455 904 aaKnown RBP8.73□□□□□ -1.01
APOB-201ENST00000233242 TRIM16LQ309B1 348 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 RHOT1Q8IXI2 618 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 TMEM35BQ8NCS4 154 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 ATP8B3O60423 1300 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 TBXAS1P24557 533 aaPredicted RBP8.73□□□□□ -1.01
APOB-201ENST00000233242 YWHAHQ04917 246 aaPredicted RBP8.73□□□□□ -1.01
APOB-201ENST00000233242 SDR42E1Q8WUS8 393 aa8.73□□□□□ -1.01
APOB-201ENST00000233242 EME1Q96AY2 570 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms