RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 NR1I3Q14994 352 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 NCAPHQ15003 741 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 KIAA1841Q6NSI8 718 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 USP49Q70CQ1 688 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 PCGF5Q86SE9 256 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 DCLK2Q8N568 766 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 PSPC1Q8WXF1 523 aaKnown RBP12.35□□□□□ -0.43
NOD1-201ENST00000222823 FAM213AQ9BRX8 229 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 CCSER1Q9C0I3 900 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 DNAJC17Q9NVM6 304 aaKnown RBP12.35□□□□□ -0.43
NOD1-201ENST00000222823 SLC12A6Q9UHW9 1150 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 SNX24Q9Y343 169 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 EVI5O60447 810 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 CA4P22748 312 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 STAT3P40763 770 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 GFPT1Q06210 699 aaPredicted RBP12.35□□□□□ -0.43
NOD1-201ENST00000222823 TERF2Q15554 542 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 SBK1Q52WX2 424 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 SMIM5Q71RC9 77 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 SCYL3Q8IZE3 742 aa12.35□□□□□ -0.43
NOD1-201ENST00000222823 CPSF3Q9UKF6 684 aaKnown RBP12.35□□□□□ -0.43
NOD1-201ENST00000222823 LMO7Q8WWI1 1683 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 ZBTB24O43167 697 aaPredicted RBP12.34□□□□□ -0.43
NOD1-201ENST00000222823 DPYDQ12882 1025 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 PYROXD1Q8WU10 500 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 GJD4Q96KN9 370 aaPredicted RBP12.34□□□□□ -0.43
NOD1-201ENST00000222823 TYW5A2RUC4 315 aaKnown RBP12.34□□□□□ -0.43
NOD1-201ENST00000222823 TADA3O75528 432 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 ACSL3O95573 720 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 PSMA2P25787 234 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 CDO1Q16878 200 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 TC2NQ8N9U0 490 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 GIMAP8Q8ND71 665 aaPredicted RBP12.34□□□□□ -0.43
NOD1-201ENST00000222823 MIPOL1Q8TD10 442 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 KLHL29Q96CT2 875 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 TRIM9Q9C026 710 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 L2HGDHQ9H9P8 463 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 MTMR4Q9NYA4 1195 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 GABBR1Q9UBS5 961 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 TLK1Q9UKI8 766 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 SYNGAP1Q96PV0 1343 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 FCER1AP12319 257 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 SLC8A1P32418 973 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 SESN3P58005 492 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 GRIN1Q05586 938 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 KCNB1Q14721 858 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 MMEL1Q495T6 779 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 SWSAP1Q6NVH7 229 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 TMEM270Q6UE05 265 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 CENPUQ71F23 418 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 TBC1D16Q8TBP0 767 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 LXNQ9BS40 222 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.34□□□□□ -0.43
NOD1-201ENST00000222823 MRFAP1Q9Y605 127 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 KIF13AQ9H1H9 1805 aa12.34□□□□□ -0.43
NOD1-201ENST00000222823 A0A1W2PQC6 194 aa12.33□□□□□ -0.43
NOD1-201ENST00000222823 GOLGA8CPA6NN73 597 aa12.33□□□□□ -0.43
NOD1-201ENST00000222823 FDX1P10109 184 aa12.33□□□□□ -0.43
NOD1-201ENST00000222823 VAMP7P51809 220 aa12.33□□□□□ -0.43
NOD1-201ENST00000222823 RCN2Q14257 317 aa12.33□□□□□ -0.43
NOD1-201ENST00000222823 PDIA5Q14554 519 aa12.33□□□□□ -0.43
NOD1-201ENST00000222823 DRAP1Q14919 205 aaPredicted RBP12.33□□□□□ -0.43
NOD1-201ENST00000222823 CEP55Q53EZ4 464 aa12.33□□□□□ -0.43
NOD1-201ENST00000222823 PPP6R3Q5H9R7 873 aaPredicted RBP12.33□□□□□ -0.43
NOD1-201ENST00000222823 C6orf118Q5T5N4 469 aa12.33□□□□□ -0.43
NOD1-201ENST00000222823 VGLL2Q8N8G2 317 aa12.33□□□□□ -0.43
NOD1-201ENST00000222823 SKA2Q8WVK7 121 aaPredicted RBP12.33□□□□□ -0.43
NOD1-201ENST00000222823 ZWILCHQ9H900 591 aa12.33□□□□□ -0.43
NOD1-201ENST00000222823 MAGED2Q9UNF1 606 aaPredicted RBP12.33□□□□□ -0.43
NOD1-201ENST00000222823 DIS3Q9Y2L1 958 aaKnown RBP12.33□□□□□ -0.43
NOD1-201ENST00000222823 TJP3O95049 919 aa12.33□□□□□ -0.44
NOD1-201ENST00000222823 PSMC5P62195 406 aa12.33□□□□□ -0.44
NOD1-201ENST00000222823 DSTYKQ6XUX3 929 aa12.33□□□□□ -0.44
NOD1-201ENST00000222823 RNF139Q8WU17 664 aa12.33□□□□□ -0.44
NOD1-201ENST00000222823 TOPORSQ9NS56 1045 aaPredicted RBP12.33□□□□□ -0.44
NOD1-201ENST00000222823 LIMA1Q9UHB6 759 aaKnown RBP12.33□□□□□ -0.44
NOD1-201ENST00000222823 LRFN2Q9ULH4 789 aa12.33□□□□□ -0.44
NOD1-201ENST00000222823 DAGLAQ9Y4D2 1042 aa12.33□□□□□ -0.44
NOD1-201ENST00000222823 HMGB1P1B2RPK0 211 aaPredicted RBP12.33□□□□□ -0.44
NOD1-201ENST00000222823 TOB1P50616 345 aaPredicted RBP12.33□□□□□ -0.44
NOD1-201ENST00000222823 WDR24Q96S15 920 aa12.33□□□□□ -0.44
NOD1-201ENST00000222823 EIF2AK1Q9BQI3 630 aaKnown RBP12.33□□□□□ -0.44
NOD1-201ENST00000222823 C11orf70Q9BRQ4 267 aa12.33□□□□□ -0.44
NOD1-201ENST00000222823 UBE2Q2LH0YL09 131 aa12.33□□□□□ -0.44
NOD1-201ENST00000222823 TROAPQ12815 778 aa12.33□□□□□ -0.44
NOD1-201ENST00000222823 TFDP2Q14188 446 aa12.33□□□□□ -0.44
NOD1-201ENST00000222823 ZNF568Q3ZCX4 644 aa12.33□□□□□ -0.44
NOD1-201ENST00000222823 CC2D1AQ6P1N0 951 aaPredicted RBP12.33□□□□□ -0.44
NOD1-201ENST00000222823 LDHDQ86WU2 507 aa12.33□□□□□ -0.44
NOD1-201ENST00000222823 HEMGNQ9BXL5 484 aa12.33□□□□□ -0.44
NOD1-201ENST00000222823 ARPP19P56211 112 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 ADCY2Q08462 1091 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 KRT39Q6A163 491 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 TRIM68Q6AZZ1 485 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 JADE1Q6IE81 842 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 BZW1Q7L1Q6 419 aaKnown RBP12.32□□□□□ -0.44
NOD1-201ENST00000222823 EDEM3Q9BZQ6 932 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 VCX3AQ9NNX9 186 aa12.32□□□□□ -0.44
NOD1-201ENST00000222823 RRP15Q9Y3B9 282 aaKnown RBP12.32□□□□□ -0.44
NOD1-201ENST00000222823 ITIH6Q6UXX5 1313 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms