RNA–Protein interactions for RNA: YKL022C

CDC16, Transcript of Subunit of the anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDC16, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC16YKL022C QDR1P40475 563 aa8.38□□□□□ -1.07
CDC16YKL022C CSC1Q06538 782 aa8.38□□□□□ -1.07
CDC16YKL022C SLX5P32828 619 aaKnown RBP8.37□□□□□ -1.07
CDC16YKL022C TPM2P40414 161 aa8.37□□□□□ -1.07
CDC16YKL022C MDG1P53885 366 aa8.37□□□□□ -1.07
CDC16YKL022C ACF4P47129 309 aa8.37□□□□□ -1.07
CDC16YKL022C POB3Q04636 552 aaKnown RBP8.37□□□□□ -1.07
CDC16YKL022C PIN2Q12057 282 aa8.37□□□□□ -1.07
CDC16YKL022C SLY41P22215 453 aa8.36□□□□□ -1.07
CDC16YKL022C GLO3P38682 493 aaKnown RBP8.36□□□□□ -1.07
CDC16YKL022C NAB3P38996 802 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
CDC16YKL022C ILV3P39522 585 aaKnown RBP8.36□□□□□ -1.07
CDC16YKL022C YOL057WQ08225 711 aa8.36□□□□□ -1.07
CDC16YKL022C UBP10P53874 792 aaPredicted RBP8.36□□□□□ -1.07
CDC16YKL022C PBP2P38151 413 aaKnown RBP RIP-Chip data8.35□□□□□ -1.07not detected
CDC16YKL022C ZDS1P50111 915 aaKnown RBP8.35□□□□□ -1.07
CDC16YKL022C ROM1P53046 1155 aa8.35□□□□□ -1.07
CDC16YKL022C ENV9Q08651 330 aa8.35□□□□□ -1.07
CDC16YKL022C SPR28Q04921 423 aa8.35□□□□□ -1.07
CDC16YKL022C PHO87P25360 923 aa8.34□□□□□ -1.07
CDC16YKL022C MCM2P29469 868 aa8.34□□□□□ -1.07
CDC16YKL022C FUR4P05316 633 aaKnown RBP8.33□□□□□ -1.08
CDC16YKL022C MAD1P40957 749 aa8.33□□□□□ -1.08
CDC16YKL022C SAM3Q08986 587 aa8.33□□□□□ -1.08
CDC16YKL022C EMP47P43555 445 aa8.33□□□□□ -1.08
CDC16YKL022C YJL049WP47048 450 aa8.33□□□□□ -1.08
CDC16YKL022C ACS2P52910 683 aaKnown RBP8.33□□□□□ -1.08
CDC16YKL022C STI1P15705 589 aaKnown RBP RIP-Chip data8.32□□□□□ -1.08not detected
CDC16YKL022C SRS2P12954 1174 aa8.32□□□□□ -1.08
CDC16YKL022C TRM1P15565 570 aaKnown RBP8.32□□□□□ -1.08
CDC16YKL022C PUN1Q06991 263 aa8.32□□□□□ -1.08
CDC16YKL022C MIP1P15801 1254 aa8.31□□□□□ -1.08
CDC16YKL022C CDC53Q12018 815 aaKnown RBP8.31□□□□□ -1.08
CDC16YKL022C WRS1Q12109 432 aaKnown RBP8.31□□□□□ -1.08
CDC16YKL022C YJR142WP47173 342 aa8.3□□□□□ -1.08
CDC16YKL022C BDF2Q07442 638 aa8.3□□□□□ -1.08
CDC16YKL022C GYP5Q12344 894 aa8.3□□□□□ -1.08
CDC16YKL022C YCK3P39962 524 aa8.3□□□□□ -1.08
CDC16YKL022C HAP4P14064 554 aa8.29□□□□□ -1.08
CDC16YKL022C MNN1P39106 762 aa8.29□□□□□ -1.08
CDC16YKL022C GPI13Q07830 1017 aa8.29□□□□□ -1.08
CDC16YKL022C MTO1P53070 669 aa8.29□□□□□ -1.08
CDC16YKL022C MPH3P0CE00 602 aa8.28□□□□□ -1.08
CDC16YKL022C TFB4Q12004 338 aa8.28□□□□□ -1.08
CDC16YKL022C NSR1P27476 414 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
CDC16YKL022C SLI15P38283 698 aa8.28□□□□□ -1.08
CDC16YKL022C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
CDC16YKL022C AI4P03878 556 aa8.27□□□□□ -1.09
CDC16YKL022C RPT1P33299 467 aaKnown RBP8.27□□□□□ -1.09
CDC16YKL022C YNL115CP53925 644 aa8.27□□□□□ -1.09
CDC16YKL022C YOL036WQ08206 761 aa8.27□□□□□ -1.09
CDC16YKL022C YGR161W-CQ3E744 92 aa8.27□□□□□ -1.09
CDC16YKL022C PHO4P07270 312 aaKnown RBP8.26□□□□□ -1.09
CDC16YKL022C TAT2P38967 592 aa8.26□□□□□ -1.09
CDC16YKL022C YGL081WP53156 320 aa8.26□□□□□ -1.09
CDC16YKL022C CLN2P20438 545 aa8.25□□□□□ -1.09
CDC16YKL022C UBP12P39538 1254 aa8.25□□□□□ -1.09
CDC16YKL022C CDC73Q06697 393 aa8.25□□□□□ -1.09
CDC16YKL022C TUM1Q08686 304 aaKnown RBP8.25□□□□□ -1.09
CDC16YKL022C SSD1P24276 1250 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
CDC16YKL022C NOP2P40991 618 aaKnown RBP8.25□□□□□ -1.09
CDC16YKL022C RMD1Q03441 430 aa8.25□□□□□ -1.09
CDC16YKL022C YAP5P40574 245 aa8.24□□□□□ -1.09
CDC16YKL022C YOR131CQ12486 218 aa8.24□□□□□ -1.09
CDC16YKL022C RTF1P53064 558 aa8.24□□□□□ -1.09
CDC16YKL022C ESF1Q06344 628 aaKnown RBP8.24□□□□□ -1.09
CDC16YKL022C LSO1Q3E827 93 aa8.24□□□□□ -1.09
CDC16YKL022C MET6P05694 767 aaKnown RBP8.23□□□□□ -1.09
CDC16YKL022C PUS6P53294 404 aa8.23□□□□□ -1.09
CDC16YKL022C GAS4Q08271 471 aa8.23□□□□□ -1.09
CDC16YKL022C ENP1P38333 483 aaKnown RBP8.23□□□□□ -1.09
CDC16YKL022C DAK2P43550 591 aa8.23□□□□□ -1.09
CDC16YKL022C BOI1P38041 980 aaKnown RBP8.22□□□□□ -1.09
CDC16YKL022C TRS120Q04183 1289 aa8.22□□□□□ -1.09
CDC16YKL022C RPP1BP10622 106 aaKnown RBP8.22□□□□□ -1.09
CDC16YKL022C DCW1P36091 449 aa8.22□□□□□ -1.09
CDC16YKL022C RTT106P40161 455 aa8.22□□□□□ -1.09
CDC16YKL022C YDL121CQ07541 149 aa8.22□□□□□ -1.09
CDC16YKL022C PPM2Q08282 695 aa8.22□□□□□ -1.09
CDC16YKL022C FRA1Q07825 749 aa8.21□□□□□ -1.1
CDC16YKL022C RPS26AP39938 119 aaKnown RBP8.21□□□□□ -1.1
CDC16YKL022C RPS26BP39939 119 aaKnown RBP8.21□□□□□ -1.1
CDC16YKL022C APL6P46682 809 aa8.21□□□□□ -1.1
CDC16YKL022C HUL5P53119 910 aa8.21□□□□□ -1.1
CDC16YKL022C PEP7P32609 515 aa8.2□□□□□ -1.1
CDC16YKL022C SOH1P38633 127 aa8.2□□□□□ -1.1
CDC16YKL022C YEN1P40028 759 aa8.2□□□□□ -1.1
CDC16YKL022C NUP82P40368 713 aa8.2□□□□□ -1.1
CDC16YKL022C TSC13Q99190 310 aa8.2□□□□□ -1.1
CDC16YKL022C SUV3P32580 737 aa8.2□□□□□ -1.1
CDC16YKL022C PDI1P17967 522 aaKnown RBP8.19□□□□□ -1.1
CDC16YKL022C RPA135P22138 1203 aaKnown RBP8.19□□□□□ -1.1
CDC16YKL022C PEX21P50091 288 aa8.19□□□□□ -1.1
CDC16YKL022C ECM16Q04217 1267 aaKnown RBP8.19□□□□□ -1.1
CDC16YKL022C GRX1P25373 110 aaKnown RBP8.18□□□□□ -1.1
CDC16YKL022C YPR084WQ06821 456 aa8.18□□□□□ -1.1
CDC16YKL022C SPT2P06843 333 aaPredicted RBP8.18□□□□□ -1.1
CDC16YKL022C GAL11P19659 1081 aa8.18□□□□□ -1.1
CDC16YKL022C VAN1P23642 535 aa8.18□□□□□ -1.1
CDC16YKL022C SEC6P32844 805 aa8.18□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms