RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 RGL2O15211 777 aa9.48□□□□□ -0.89
PTP4A2-220ENST00000627328 ONECUT3O60422 494 aaPredicted RBP9.46□□□□□ -0.9
PTP4A2-220ENST00000627328 EVI5O60447 810 aa9.45□□□□□ -0.9
PTP4A2-220ENST00000627328 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.45□□□□□ -0.9
PTP4A2-220ENST00000627328 KIAA1468Q9P260 1216 aa9.45□□□□□ -0.9
PTP4A2-220ENST00000627328 HPS5Q9UPZ3 1129 aa9.45□□□□□ -0.9
PTP4A2-220ENST00000627328 LRCH3Q96II8 777 aa9.44□□□□□ -0.9
PTP4A2-220ENST00000627328 COL9A1P20849 921 aa9.41□□□□□ -0.9
PTP4A2-220ENST00000627328 FAM98CQ17RN3 349 aaKnown RBP9.41□□□□□ -0.9
PTP4A2-220ENST00000627328 PPP1R18Q6NYC8 613 aa9.41□□□□□ -0.9
PTP4A2-220ENST00000627328 PPP1R15BQ5SWA1 713 aa9.4□□□□□ -0.9
PTP4A2-220ENST00000627328 FBXW7Q969H0 707 aa9.39□□□□□ -0.91
PTP4A2-220ENST00000627328 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.39□□□□□ -0.91
PTP4A2-220ENST00000627328 SEPT9Q9UHD8 586 aaPredicted RBP9.39□□□□□ -0.91
PTP4A2-220ENST00000627328 TJAP1Q5JTD0 557 aa9.38□□□□□ -0.91
PTP4A2-220ENST00000627328 TREML4Q6UXN2 200 aa9.37□□□□□ -0.91
PTP4A2-220ENST00000627328 PPP4CP60510 307 aa9.36□□□□□ -0.91
PTP4A2-220ENST00000627328 HS6ST3Q8IZP7 471 aa9.36□□□□□ -0.91
PTP4A2-220ENST00000627328 CRISPLD2Q9H0B8 497 aa9.36□□□□□ -0.91
PTP4A2-220ENST00000627328 IL21Q9HBE4 155 aa9.36□□□□□ -0.91
PTP4A2-220ENST00000627328 PCDHGA10Q9Y5H3 936 aa9.36□□□□□ -0.91
PTP4A2-220ENST00000627328 TYW1BQ6NUM6 668 aa9.35□□□□□ -0.91
PTP4A2-220ENST00000627328 MAP3K9P80192 1104 aa9.33□□□□□ -0.92
PTP4A2-220ENST00000627328 PKDCCQ504Y2 493 aa9.33□□□□□ -0.92
PTP4A2-220ENST00000627328 GGCXP38435 758 aa9.32□□□□□ -0.92
PTP4A2-220ENST00000627328 AMER1Q5JTC6 1135 aaPredicted RBP9.32□□□□□ -0.92
PTP4A2-220ENST00000627328 STK17AQ9UEE5 414 aa9.32□□□□□ -0.92
PTP4A2-220ENST00000627328 TRIM6-TRIM34B2RNG4 842 aa9.31□□□□□ -0.92
PTP4A2-220ENST00000627328 DGAT1O75907 488 aa9.31□□□□□ -0.92
PTP4A2-220ENST00000627328 LCE2AQ5TA79 106 aaPredicted RBP9.31□□□□□ -0.92
PTP4A2-220ENST00000627328 MTRQ99707 1265 aa9.31□□□□□ -0.92
PTP4A2-220ENST00000627328 DNAJC5Q9H3Z4 198 aa9.31□□□□□ -0.92
PTP4A2-220ENST00000627328 PHF14O94880 888 aa9.3□□□□□ -0.92
PTP4A2-220ENST00000627328 CHGAP10645 457 aaKnown RBP9.3□□□□□ -0.92
PTP4A2-220ENST00000627328 MYT1Q01538 1121 aa9.3□□□□□ -0.92
PTP4A2-220ENST00000627328 PDE4AP27815 886 aa9.28□□□□□ -0.92
PTP4A2-220ENST00000627328 POTECB2RU33 542 aa9.27□□□□□ -0.93
PTP4A2-220ENST00000627328 RYDENQ9NUL5 291 aaKnown RBP9.27□□□□□ -0.93
PTP4A2-220ENST00000627328 LOC100996750A0A140TA64 210 aa9.26□□□□□ -0.93
PTP4A2-220ENST00000627328 KRTAP4-6Q9BYQ5 205 aa9.26□□□□□ -0.93
PTP4A2-220ENST00000627328 C6orf132Q5T0Z8 1188 aa9.25□□□□□ -0.93
PTP4A2-220ENST00000627328 TMUB1Q9BVT8 246 aa9.25□□□□□ -0.93
PTP4A2-220ENST00000627328 INSM1Q01101 510 aaPredicted RBP9.23□□□□□ -0.93
PTP4A2-220ENST00000627328 PACS2Q86VP3 889 aa9.23□□□□□ -0.93
PTP4A2-220ENST00000627328 EPAS1Q99814 870 aa9.22□□□□□ -0.93
PTP4A2-220ENST00000627328 TRIM67Q6ZTA4 783 aa9.21□□□□□ -0.94
PTP4A2-220ENST00000627328 ZNF516Q92618 1163 aa9.21□□□□□ -0.94
PTP4A2-220ENST00000627328 DCAF8L2P0C7V8 631 aa9.2□□□□□ -0.94
PTP4A2-220ENST00000627328 PRR20EP86478 221 aa9.2□□□□□ -0.94
PTP4A2-220ENST00000627328 PRR20CP86479 221 aa9.2□□□□□ -0.94
PTP4A2-220ENST00000627328 PRR20DP86480 221 aa9.2□□□□□ -0.94
PTP4A2-220ENST00000627328 PRR20BP86481 221 aa9.2□□□□□ -0.94
PTP4A2-220ENST00000627328 PRR20AP86496 221 aa9.2□□□□□ -0.94
PTP4A2-220ENST00000627328 WFS1O76024 890 aa9.19□□□□□ -0.94
PTP4A2-220ENST00000627328 DDX27Q96GQ7 796 aaKnown RBP9.18□□□□□ -0.94
PTP4A2-220ENST00000627328 NCKAP5LQ9HCH0 1330 aa9.18□□□□□ -0.94
PTP4A2-220ENST00000627328 SAMD7Q7Z3H4 446 aa9.17□□□□□ -0.94
PTP4A2-220ENST00000627328 RTN4Q9NQC3 1192 aaKnown RBP9.17□□□□□ -0.94
PTP4A2-220ENST00000627328 SLC19A1P41440 591 aa9.16□□□□□ -0.94
PTP4A2-220ENST00000627328 NKX2-3Q8TAU0 364 aa9.16□□□□□ -0.94
PTP4A2-220ENST00000627328 FAM187AA6NFU0 413 aa9.15□□□□□ -0.94
PTP4A2-220ENST00000627328 WIPF1O43516 503 aa9.15□□□□□ -0.94
PTP4A2-220ENST00000627328 NKX1-1Q15270 411 aaPredicted RBP9.15□□□□□ -0.94
PTP4A2-220ENST00000627328 LARP6Q9BRS8 491 aaKnown RBP9.14□□□□□ -0.95
PTP4A2-220ENST00000627328 ZNF598Q86UK7 904 aaKnown RBP9.13□□□□□ -0.95
PTP4A2-220ENST00000627328 NECTIN2Q92692 538 aa9.13□□□□□ -0.95
PTP4A2-220ENST00000627328 EMILIN3Q9NT22 766 aa9.12□□□□□ -0.95
PTP4A2-220ENST00000627328 TSKSQ9UJT2 592 aa9.12□□□□□ -0.95
PTP4A2-220ENST00000627328 SPRYD7Q5W111 196 aa9.11□□□□□ -0.95
PTP4A2-220ENST00000627328 AAASQ9NRG9 546 aa9.11□□□□□ -0.95
PTP4A2-220ENST00000627328 HDGFP51858 240 aaKnown RBP9.1□□□□□ -0.95
PTP4A2-220ENST00000627328 APLP1P51693 650 aa9.09□□□□□ -0.95
PTP4A2-220ENST00000627328 MFSD10Q14728 455 aa9.09□□□□□ -0.95
PTP4A2-220ENST00000627328 RBM33Q96EV2 1170 aaKnown RBP9.09□□□□□ -0.95
PTP4A2-220ENST00000627328 GTPBP6O43824 516 aaPredicted RBP9.08□□□□□ -0.96
PTP4A2-220ENST00000627328 BBXQ8WY36 941 aaPredicted RBP9.08□□□□□ -0.96
PTP4A2-220ENST00000627328 ST8SIA5O15466 376 aa9.07□□□□□ -0.96
PTP4A2-220ENST00000627328 COPS2P61201 443 aa9.06□□□□□ -0.96
PTP4A2-220ENST00000627328 RNF223E7ERA6 249 aa9.05□□□□□ -0.96
PTP4A2-220ENST00000627328 RNF40O75150 1001 aa9.05□□□□□ -0.96
PTP4A2-220ENST00000627328 ZPR1O75312 459 aa9.05□□□□□ -0.96
PTP4A2-220ENST00000627328 NFX1Q12986 1120 aaKnown RBP9.05□□□□□ -0.96
PTP4A2-220ENST00000627328 ZNF697Q5TEC3 545 aa9.05□□□□□ -0.96
PTP4A2-220ENST00000627328 FAM181BA6NEQ2 426 aa9.04□□□□□ -0.96
PTP4A2-220ENST00000627328 SMAPO00193 183 aa9.04□□□□□ -0.96
PTP4A2-220ENST00000627328 NBPF26B4DH59 902 aa9.03□□□□□ -0.96
PTP4A2-220ENST00000627328 GDF9O60383 454 aa9.03□□□□□ -0.96
PTP4A2-220ENST00000627328 EMID1Q96A84 441 aaPredicted RBP9.03□□□□□ -0.96
PTP4A2-220ENST00000627328 C11orf95C9JLR9 678 aaPredicted RBP9.02□□□□□ -0.97
PTP4A2-220ENST00000627328 CRIPAKQ8N1N5 446 aa9.02□□□□□ -0.97
PTP4A2-220ENST00000627328 CDCA7LQ96GN5 454 aa9.02□□□□□ -0.97
PTP4A2-220ENST00000627328 TNFRSF10AO00220 468 aa9.01□□□□□ -0.97
PTP4A2-220ENST00000627328 ANKLE1Q8NAG6 615 aa9.01□□□□□ -0.97
PTP4A2-220ENST00000627328 TATDN2Q93075 761 aa9.01□□□□□ -0.97
PTP4A2-220ENST00000627328 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.01□□□□□ -0.97
PTP4A2-220ENST00000627328 EN1Q05925 392 aaPredicted RBP9□□□□□ -0.97
PTP4A2-220ENST00000627328 PNMA3Q9UL41 463 aa9□□□□□ -0.97
PTP4A2-220ENST00000627328 MAP3K7O43318 606 aa8.99□□□□□ -0.97
PTP4A2-220ENST00000627328 PRSS12P56730 875 aa8.99□□□□□ -0.97
PTP4A2-220ENST00000627328 CERKQ8TCT0 537 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms