RNA–Protein interactions for RNA: ENST00000611776.4

ABCA13-208, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 1 (best)

Gene ABCA13, Length 7,250 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-208ENST00000611776 WDR78Q5VTH9 848 aa8.95□□□□□ -0.98
ABCA13-208ENST00000611776 BAG6P46379 1132 aa8.95□□□□□ -0.98
ABCA13-208ENST00000611776 TONSLQ96HA7 1378 aa8.95□□□□□ -0.98
ABCA13-208ENST00000611776 SOGA1O94964 1423 aa8.95□□□□□ -0.98
ABCA13-208ENST00000611776 TOMM22Q9NS69 142 aa8.95□□□□□ -0.98
ABCA13-208ENST00000611776 VSIG10Q8N0Z9 540 aa8.95□□□□□ -0.98
ABCA13-208ENST00000611776 KNSTRNQ9Y448 316 aa8.94□□□□□ -0.98
ABCA13-208ENST00000611776 RAPGEF4Q8WZA2 1011 aa8.94□□□□□ -0.98
ABCA13-208ENST00000611776 PTPRGP23470 1445 aa8.94□□□□□ -0.98
ABCA13-208ENST00000611776 VTI1AQ96AJ9 217 aa8.94□□□□□ -0.98
ABCA13-208ENST00000611776 ANP32BQ92688 251 aaKnown RBP8.93□□□□□ -0.98
ABCA13-208ENST00000611776 MINK1Q8N4C8 1332 aaPredicted RBP8.93□□□□□ -0.98
ABCA13-208ENST00000611776 MARCH6O60337 910 aa8.93□□□□□ -0.98
ABCA13-208ENST00000611776 SLC26A8Q96RN1 970 aa8.91□□□□□ -0.98
ABCA13-208ENST00000611776 ADRA2BP18089 450 aa8.91□□□□□ -0.98
ABCA13-208ENST00000611776 ZNF622Q969S3 477 aaKnown RBP eCLIP8.91□□□□□ -0.98
ABCA13-208ENST00000611776 CDCA8Q53HL2 280 aa8.9□□□□□ -0.98
ABCA13-208ENST00000611776 ANP32EQ9BTT0 268 aa8.9□□□□□ -0.98
ABCA13-208ENST00000611776 EAPPQ56P03 285 aaPredicted RBP8.9□□□□□ -0.98
ABCA13-208ENST00000611776 IKQ13123 557 aaPredicted RBP8.9□□□□□ -0.99
ABCA13-208ENST00000611776 CEP164Q9UPV0 1460 aa8.9□□□□□ -0.99
ABCA13-208ENST00000611776 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.89□□□□□ -0.99
ABCA13-208ENST00000611776 BCL2L13Q9BXK5 485 aa8.89□□□□□ -0.99
ABCA13-208ENST00000611776 STK32BQ9NY57 414 aa8.89□□□□□ -0.99
ABCA13-208ENST00000611776 DHX16O60231 1041 aaKnown RBP8.89□□□□□ -0.99
ABCA13-208ENST00000611776 SUPT16HQ9Y5B9 1047 aaKnown RBP8.89□□□□□ -0.99
ABCA13-208ENST00000611776 PAF1Q8N7H5 531 aa8.89□□□□□ -0.99
ABCA13-208ENST00000611776 GPRASP1Q5JY77 1395 aa8.89□□□□□ -0.99
ABCA13-208ENST00000611776 RAPGEF3O95398 923 aa8.89□□□□□ -0.99
ABCA13-208ENST00000611776 AK7Q96M32 723 aa8.89□□□□□ -0.99
ABCA13-208ENST00000611776 RXRBP28702 533 aa8.88□□□□□ -0.99
ABCA13-208ENST00000611776 AMOTL1Q8IY63 956 aa8.88□□□□□ -0.99
ABCA13-208ENST00000611776 CCDC136Q96JN2 1154 aa8.88□□□□□ -0.99
ABCA13-208ENST00000611776 DCAF11Q8TEB1 546 aa8.88□□□□□ -0.99
ABCA13-208ENST00000611776 STAC3Q96MF2 364 aa8.87□□□□□ -0.99
ABCA13-208ENST00000611776 CARD11Q9BXL7 1154 aa8.87□□□□□ -0.99
ABCA13-208ENST00000611776 TMEM132AQ24JP5 1023 aa8.87□□□□□ -0.99
ABCA13-208ENST00000611776 TRAK1Q9UPV9 953 aa8.87□□□□□ -0.99
ABCA13-208ENST00000611776 ZNF710Q8N1W2 664 aa8.87□□□□□ -0.99
ABCA13-208ENST00000611776 FYB1O15117 783 aa8.86□□□□□ -0.99
ABCA13-208ENST00000611776 ZCCHC6Q5VYS8 1495 aaKnown RBP8.86□□□□□ -0.99
ABCA13-208ENST00000611776 MYCP01106 439 aaPredicted RBP8.86□□□□□ -0.99
ABCA13-208ENST00000611776 LMOD1P29536 600 aaPredicted RBP8.86□□□□□ -0.99
ABCA13-208ENST00000611776 TFCP2L1Q9NZI6 479 aa8.86□□□□□ -0.99
ABCA13-208ENST00000611776 HDAC9Q9UKV0 1011 aa8.86□□□□□ -0.99
ABCA13-208ENST00000611776 ABTB2Q8N961 1025 aa8.86□□□□□ -0.99
ABCA13-208ENST00000611776 MORC1Q86VD1 984 aa8.86□□□□□ -0.99
ABCA13-208ENST00000611776 DDRGK1Q96HY6 314 aa8.86□□□□□ -0.99
ABCA13-208ENST00000611776 TEFQ10587 303 aa8.85□□□□□ -0.99
ABCA13-208ENST00000611776 TRIM44Q96DX7 344 aaPredicted RBP8.85□□□□□ -0.99
ABCA13-208ENST00000611776 CUX2O14529 1486 aa8.85□□□□□ -0.99
ABCA13-208ENST00000611776 PLIN1O60240 522 aa8.85□□□□□ -0.99
ABCA13-208ENST00000611776 HMGB2P26583 209 aaKnown RBP8.85□□□□□ -0.99
ABCA13-208ENST00000611776 ZC3H6P61129 1189 aaKnown RBP8.85□□□□□ -0.99
ABCA13-208ENST00000611776 NOL8Q76FK4 1167 aaKnown RBP8.85□□□□□ -0.99
ABCA13-208ENST00000611776 ZPR1O75312 459 aa8.84□□□□□ -0.99
ABCA13-208ENST00000611776 MTMR7Q9Y216 660 aa8.84□□□□□ -0.99
ABCA13-208ENST00000611776 CC2D1BQ5T0F9 858 aaKnown RBP8.84□□□□□ -0.99
ABCA13-208ENST00000611776 APBA3O96018 575 aa8.83□□□□□ -1
ABCA13-208ENST00000611776 ZSCAN29Q8IWY8 852 aaPredicted RBP8.83□□□□□ -1
ABCA13-208ENST00000611776 GNL2Q13823 731 aaKnown RBP8.83□□□□□ -1
ABCA13-208ENST00000611776 MRS2Q9HD23 443 aa8.82□□□□□ -1
ABCA13-208ENST00000611776 WWC2Q6AWC2 1192 aa8.82□□□□□ -1
ABCA13-208ENST00000611776 PNNQ9H307 717 aaKnown RBP8.82□□□□□ -1
ABCA13-208ENST00000611776 EIF2S2P20042 333 aaKnown RBP8.82□□□□□ -1
ABCA13-208ENST00000611776 GJA3Q9Y6H8 435 aa8.82□□□□□ -1
ABCA13-208ENST00000611776 RBM26Q5T8P6 1007 aaKnown RBP8.82□□□□□ -1
ABCA13-208ENST00000611776 NLRP6P59044 892 aa8.81□□□□□ -1
ABCA13-208ENST00000611776 ARHGAP27Q6ZUM4 889 aa8.81□□□□□ -1
ABCA13-208ENST00000611776 ZRSR1Q15695 479 aaKnown RBP8.81□□□□□ -1
ABCA13-208ENST00000611776 CCDC27Q2M243 656 aa8.81□□□□□ -1
ABCA13-208ENST00000611776 ATP2B2Q01814 1243 aa8.81□□□□□ -1
ABCA13-208ENST00000611776 FTSJ3Q8IY81 847 aaKnown RBP8.81□□□□□ -1
ABCA13-208ENST00000611776 E9PSI1 815 aa8.81□□□□□ -1
ABCA13-208ENST00000611776 ABT1Q9ULW3 272 aaKnown RBP8.81□□□□□ -1
ABCA13-208ENST00000611776 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.8□□□□□ -1
ABCA13-208ENST00000611776 SKIV2LQ15477 1246 aaKnown RBP8.8□□□□□ -1
ABCA13-208ENST00000611776 KIF27Q86VH2 1401 aa8.8□□□□□ -1
ABCA13-208ENST00000611776 NCKAP5LQ9HCH0 1330 aa8.8□□□□□ -1
ABCA13-208ENST00000611776 CCDC43Q96MW1 224 aaKnown RBP8.8□□□□□ -1
ABCA13-208ENST00000611776 SIN3AQ96ST3 1273 aa8.8□□□□□ -1
ABCA13-208ENST00000611776 WRNQ14191 1432 aaPredicted RBP eCLIP8.8□□□□□ -1
ABCA13-208ENST00000611776 B4GALNT3Q6L9W6 998 aa8.79□□□□□ -1
ABCA13-208ENST00000611776 COG3Q96JB2 828 aa8.79□□□□□ -1
ABCA13-208ENST00000611776 ACSBG1Q96GR2 724 aa8.79□□□□□ -1
ABCA13-208ENST00000611776 NACADO15069 1562 aa8.79□□□□□ -1
ABCA13-208ENST00000611776 NECTIN2Q92692 538 aa8.79□□□□□ -1
ABCA13-208ENST00000611776 TERF2IPQ9NYB0 399 aa8.79□□□□□ -1
ABCA13-208ENST00000611776 MPHOSPH10O00566 681 aaKnown RBP8.79□□□□□ -1
ABCA13-208ENST00000611776 ZNF772Q68DY9 489 aaPredicted RBP8.79□□□□□ -1
ABCA13-208ENST00000611776 PODXL2Q9NZ53 605 aa8.79□□□□□ -1
ABCA13-208ENST00000611776 NF2P35240 595 aa8.79□□□□□ -1
ABCA13-208ENST00000611776 PSDA5PKW4 1024 aaPredicted RBP8.78□□□□□ -1
ABCA13-208ENST00000611776 NUTM1Q86Y26 1132 aa8.78□□□□□ -1
ABCA13-208ENST00000611776 YY1P25490 414 aa8.78□□□□□ -1
ABCA13-208ENST00000611776 USP21Q9UK80 565 aa8.77□□□□□ -1
ABCA13-208ENST00000611776 STK31Q9BXU1 1019 aa8.77□□□□□ -1.01
ABCA13-208ENST00000611776 QTRT2Q9H974 415 aaKnown RBP8.77□□□□□ -1.01
ABCA13-208ENST00000611776 SLC4A10Q6U841 1118 aa8.77□□□□□ -1.01
ABCA13-208ENST00000611776 KIF6Q6ZMV9 814 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms