RNA–Protein interactions for RNA: ENST00000553515.1

AL352979.3-201, humanhuman

BASIC

Gene AL352979.3, Length 247 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL352979.3-201ENST00000553515 SEPT9Q9UHD8 586 aaPredicted RBP9.9□□□□□ -0.82
AL352979.3-201ENST00000553515 KIAA1468Q9P260 1216 aa9.89□□□□□ -0.83
AL352979.3-201ENST00000553515 HPS5Q9UPZ3 1129 aa9.89□□□□□ -0.83
AL352979.3-201ENST00000553515 TSR3Q9UJK0 312 aaKnown RBP9.86□□□□□ -0.83
AL352979.3-201ENST00000553515 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.85□□□□□ -0.83
AL352979.3-201ENST00000553515 PDZRN3Q9UPQ7 1066 aa9.85□□□□□ -0.83
AL352979.3-201ENST00000553515 NISCHQ9Y2I1 1504 aa9.84□□□□□ -0.83
AL352979.3-201ENST00000553515 LRCH3Q96II8 777 aa9.84□□□□□ -0.83
AL352979.3-201ENST00000553515 CRISPLD2Q9H0B8 497 aa9.83□□□□□ -0.84
AL352979.3-201ENST00000553515 V9GY48 417 aaPredicted RBP9.83□□□□□ -0.84
AL352979.3-201ENST00000553515 PCDHGA10Q9Y5H3 936 aa9.82□□□□□ -0.84
AL352979.3-201ENST00000553515 PPP1R18Q6NYC8 613 aa9.8□□□□□ -0.84
AL352979.3-201ENST00000553515 FAM98CQ17RN3 349 aaKnown RBP9.79□□□□□ -0.84
AL352979.3-201ENST00000553515 MAP3K9P80192 1104 aa9.77□□□□□ -0.85
AL352979.3-201ENST00000553515 TJAP1Q5JTD0 557 aa9.77□□□□□ -0.85
AL352979.3-201ENST00000553515 TYW1BQ6NUM6 668 aa9.77□□□□□ -0.85
AL352979.3-201ENST00000553515 FBXW7Q969H0 707 aa9.75□□□□□ -0.85
AL352979.3-201ENST00000553515 TRIM6-TRIM34B2RNG4 842 aa9.74□□□□□ -0.85
AL352979.3-201ENST00000553515 ONECUT3O60422 494 aaPredicted RBP9.74□□□□□ -0.85
AL352979.3-201ENST00000553515 PPP4CP60510 307 aa9.74□□□□□ -0.85
AL352979.3-201ENST00000553515 PKD2Q13563 968 aa9.73□□□□□ -0.85
AL352979.3-201ENST00000553515 MTRQ99707 1265 aa9.73□□□□□ -0.85
AL352979.3-201ENST00000553515 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.73□□□□□ -0.85
AL352979.3-201ENST00000553515 NCKAP5LQ9HCH0 1330 aa9.73□□□□□ -0.85
AL352979.3-201ENST00000553515 IL21Q9HBE4 155 aa9.71□□□□□ -0.86
AL352979.3-201ENST00000553515 POTECB2RU33 542 aa9.7□□□□□ -0.86
AL352979.3-201ENST00000553515 PHF14O94880 888 aa9.7□□□□□ -0.86
AL352979.3-201ENST00000553515 PDE4AP27815 886 aa9.7□□□□□ -0.86
AL352979.3-201ENST00000553515 C6orf132Q5T0Z8 1188 aa9.69□□□□□ -0.86
AL352979.3-201ENST00000553515 HS6ST3Q8IZP7 471 aa9.68□□□□□ -0.86
AL352979.3-201ENST00000553515 ZNF516Q92618 1163 aa9.68□□□□□ -0.86
AL352979.3-201ENST00000553515 PKDCCQ504Y2 493 aa9.66□□□□□ -0.86
AL352979.3-201ENST00000553515 DDX27Q96GQ7 796 aaKnown RBP9.65□□□□□ -0.86
AL352979.3-201ENST00000553515 LARP6Q9BRS8 491 aaKnown RBP9.65□□□□□ -0.86
AL352979.3-201ENST00000553515 EMILIN3Q9NT22 766 aa9.65□□□□□ -0.86
AL352979.3-201ENST00000553515 MYT1Q01538 1121 aa9.64□□□□□ -0.87
AL352979.3-201ENST00000553515 TREML4Q6UXN2 200 aa9.64□□□□□ -0.87
AL352979.3-201ENST00000553515 RBM33Q96EV2 1170 aaKnown RBP9.64□□□□□ -0.87
AL352979.3-201ENST00000553515 SAMD7Q7Z3H4 446 aa9.63□□□□□ -0.87
AL352979.3-201ENST00000553515 NKX2-3Q8TAU0 364 aa9.63□□□□□ -0.87
AL352979.3-201ENST00000553515 GGCXP38435 758 aa9.61□□□□□ -0.87
AL352979.3-201ENST00000553515 TRIM67Q6ZTA4 783 aa9.61□□□□□ -0.87
AL352979.3-201ENST00000553515 PACS2Q86VP3 889 aa9.6□□□□□ -0.87
AL352979.3-201ENST00000553515 EPAS1Q99814 870 aa9.6□□□□□ -0.87
AL352979.3-201ENST00000553515 SMAPO00193 183 aa9.59□□□□□ -0.87
AL352979.3-201ENST00000553515 NKX1-1Q15270 411 aaPredicted RBP9.59□□□□□ -0.87
AL352979.3-201ENST00000553515 LCE2AQ5TA79 106 aaPredicted RBP9.59□□□□□ -0.87
AL352979.3-201ENST00000553515 TSKSQ9UJT2 592 aa9.59□□□□□ -0.87
AL352979.3-201ENST00000553515 RNF40O75150 1001 aa9.58□□□□□ -0.88
AL352979.3-201ENST00000553515 DGAT1O75907 488 aa9.58□□□□□ -0.88
AL352979.3-201ENST00000553515 CHGAP10645 457 aaKnown RBP9.58□□□□□ -0.88
AL352979.3-201ENST00000553515 RYDENQ9NUL5 291 aaKnown RBP9.57□□□□□ -0.88
AL352979.3-201ENST00000553515 APLP1P51693 650 aa9.55□□□□□ -0.88
AL352979.3-201ENST00000553515 FAM187AA6NFU0 413 aa9.54□□□□□ -0.88
AL352979.3-201ENST00000553515 COPS2P61201 443 aa9.54□□□□□ -0.88
AL352979.3-201ENST00000553515 MFSD10Q14728 455 aa9.54□□□□□ -0.88
AL352979.3-201ENST00000553515 SLC19A1P41440 591 aa9.53□□□□□ -0.88
AL352979.3-201ENST00000553515 STK17AQ9UEE5 414 aa9.53□□□□□ -0.88
AL352979.3-201ENST00000553515 ST8SIA5O15466 376 aa9.52□□□□□ -0.89
AL352979.3-201ENST00000553515 TMUB1Q9BVT8 246 aa9.51□□□□□ -0.89
AL352979.3-201ENST00000553515 TSR1Q2NL82 804 aaKnown RBP9.5□□□□□ -0.89
AL352979.3-201ENST00000553515 DDX12PQ92771 950 aa9.5□□□□□ -0.89
AL352979.3-201ENST00000553515 MAP3K7O43318 606 aa9.48□□□□□ -0.89
AL352979.3-201ENST00000553515 WFS1O76024 890 aa9.48□□□□□ -0.89
AL352979.3-201ENST00000553515 EMID1Q96A84 441 aaPredicted RBP9.48□□□□□ -0.89
AL352979.3-201ENST00000553515 TNFRSF10AO00220 468 aa9.47□□□□□ -0.89
AL352979.3-201ENST00000553515 PRR20EP86478 221 aa9.47□□□□□ -0.89
AL352979.3-201ENST00000553515 PRR20CP86479 221 aa9.47□□□□□ -0.89
AL352979.3-201ENST00000553515 PRR20DP86480 221 aa9.47□□□□□ -0.89
AL352979.3-201ENST00000553515 PRR20BP86481 221 aa9.47□□□□□ -0.89
AL352979.3-201ENST00000553515 PRR20AP86496 221 aa9.47□□□□□ -0.89
AL352979.3-201ENST00000553515 LOC100996750A0A140TA64 210 aa9.46□□□□□ -0.9
AL352979.3-201ENST00000553515 C3orf80F5H4A9 247 aa9.46□□□□□ -0.9
AL352979.3-201ENST00000553515 DPYSL4O14531 572 aa9.46□□□□□ -0.9
AL352979.3-201ENST00000553515 SPRYD7Q5W111 196 aa9.46□□□□□ -0.9
AL352979.3-201ENST00000553515 CDCA7LQ96GN5 454 aa9.46□□□□□ -0.9
AL352979.3-201ENST00000553515 KRTAP4-6Q9BYQ5 205 aa9.46□□□□□ -0.9
AL352979.3-201ENST00000553515 PNMA3Q9UL41 463 aa9.46□□□□□ -0.9
AL352979.3-201ENST00000553515 RNF223E7ERA6 249 aa9.45□□□□□ -0.9
AL352979.3-201ENST00000553515 EN1Q05925 392 aaPredicted RBP9.45□□□□□ -0.9
AL352979.3-201ENST00000553515 NBR1Q14596 966 aa9.45□□□□□ -0.9
AL352979.3-201ENST00000553515 ZNF598Q86UK7 904 aaKnown RBP9.45□□□□□ -0.9
AL352979.3-201ENST00000553515 AAASQ9NRG9 546 aa9.45□□□□□ -0.9
AL352979.3-201ENST00000553515 FAM198AQ9UFP1 575 aa9.45□□□□□ -0.9
AL352979.3-201ENST00000553515 NBPF26B4DH59 902 aa9.44□□□□□ -0.9
AL352979.3-201ENST00000553515 ZNF697Q5TEC3 545 aa9.44□□□□□ -0.9
AL352979.3-201ENST00000553515 ZPR1O75312 459 aa9.43□□□□□ -0.9
AL352979.3-201ENST00000553515 TATDN2Q93075 761 aa9.43□□□□□ -0.9
AL352979.3-201ENST00000553515 DNAJC5Q9H3Z4 198 aa9.43□□□□□ -0.9
AL352979.3-201ENST00000553515 HDGFP51858 240 aaKnown RBP9.42□□□□□ -0.9
AL352979.3-201ENST00000553515 PRSS12P56730 875 aa9.42□□□□□ -0.9
AL352979.3-201ENST00000553515 INSM1Q01101 510 aaPredicted RBP9.42□□□□□ -0.9
AL352979.3-201ENST00000553515 WIPF1O43516 503 aa9.38□□□□□ -0.91
AL352979.3-201ENST00000553515 GDF9O60383 454 aa9.38□□□□□ -0.91
AL352979.3-201ENST00000553515 LIAT1Q6ZQX7 453 aa9.38□□□□□ -0.91
AL352979.3-201ENST00000553515 PPEF1O14829 653 aaPredicted RBP9.37□□□□□ -0.91
AL352979.3-201ENST00000553515 NFX1Q12986 1120 aaKnown RBP9.37□□□□□ -0.91
AL352979.3-201ENST00000553515 NUDT18Q6ZVK8 323 aa9.37□□□□□ -0.91
AL352979.3-201ENST00000553515 NECTIN2Q92692 538 aa9.37□□□□□ -0.91
AL352979.3-201ENST00000553515 DACH1Q9UI36 760 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms