RNA–Protein interactions for RNA: ENST00000542279.5

GTF2H3-209, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-209ENST00000542279 FBXW7Q969H0 707 aa8.99□□□□□ -0.97
GTF2H3-209ENST00000542279 ZFRQ96KR1 1074 aaKnown RBP8.99□□□□□ -0.97
GTF2H3-209ENST00000542279 PROX2Q3B8N5 592 aa8.98□□□□□ -0.97
GTF2H3-209ENST00000542279 KIAA1468Q9P260 1216 aa8.98□□□□□ -0.97
GTF2H3-209ENST00000542279 LARP6Q9BRS8 491 aaKnown RBP8.97□□□□□ -0.97
GTF2H3-209ENST00000542279 WBP1LQ9NX94 342 aa8.97□□□□□ -0.97
GTF2H3-209ENST00000542279 ONECUT3O60422 494 aaPredicted RBP8.96□□□□□ -0.98
GTF2H3-209ENST00000542279 TYW1BQ6NUM6 668 aa8.96□□□□□ -0.98
GTF2H3-209ENST00000542279 DDX27Q96GQ7 796 aaKnown RBP8.96□□□□□ -0.98
GTF2H3-209ENST00000542279 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.94□□□□□ -0.98
GTF2H3-209ENST00000542279 TSR3Q9UJK0 312 aaKnown RBP8.94□□□□□ -0.98
GTF2H3-209ENST00000542279 PCDHGA10Q9Y5H3 936 aa8.94□□□□□ -0.98
GTF2H3-209ENST00000542279 LRCH3Q96II8 777 aa8.93□□□□□ -0.98
GTF2H3-209ENST00000542279 PHF14O94880 888 aa8.92□□□□□ -0.98
GTF2H3-209ENST00000542279 COL9A1P20849 921 aa8.92□□□□□ -0.98
GTF2H3-209ENST00000542279 HPS5Q9UPZ3 1129 aa8.91□□□□□ -0.98
GTF2H3-209ENST00000542279 PPP4CP60510 307 aa8.9□□□□□ -0.98
GTF2H3-209ENST00000542279 FAM98CQ17RN3 349 aaKnown RBP8.9□□□□□ -0.98
GTF2H3-209ENST00000542279 SEPT9Q9UHD8 586 aaPredicted RBP8.9□□□□□ -0.98
GTF2H3-209ENST00000542279 NCKAP5LQ9HCH0 1330 aa8.89□□□□□ -0.99
GTF2H3-209ENST00000542279 SLC24A1O60721 1099 aa8.89□□□□□ -0.99
GTF2H3-209ENST00000542279 EPAS1Q99814 870 aa8.89□□□□□ -0.99
GTF2H3-209ENST00000542279 NRG2O14511 850 aaPredicted RBP8.88□□□□□ -0.99
GTF2H3-209ENST00000542279 C6orf132Q5T0Z8 1188 aa8.88□□□□□ -0.99
GTF2H3-209ENST00000542279 ZNF787Q6DD87 383 aa8.88□□□□□ -0.99
GTF2H3-209ENST00000542279 PRKD2Q9BZL6 878 aa8.88□□□□□ -0.99
GTF2H3-209ENST00000542279 PACS2Q86VP3 889 aa8.87□□□□□ -0.99
GTF2H3-209ENST00000542279 DNAJC5Q9H3Z4 198 aa8.87□□□□□ -0.99
GTF2H3-209ENST00000542279 TRIM6-TRIM34B2RNG4 842 aa8.86□□□□□ -0.99
GTF2H3-209ENST00000542279 NKX1-1Q15270 411 aaPredicted RBP8.85□□□□□ -0.99
GTF2H3-209ENST00000542279 HDGFP51858 240 aaKnown RBP8.83□□□□□ -1
GTF2H3-209ENST00000542279 RBM33Q96EV2 1170 aaKnown RBP8.82□□□□□ -1
GTF2H3-209ENST00000542279 V9GY48 417 aaPredicted RBP8.82□□□□□ -1
GTF2H3-209ENST00000542279 EMILIN3Q9NT22 766 aa8.81□□□□□ -1
GTF2H3-209ENST00000542279 MFSD10Q14728 455 aa8.8□□□□□ -1
GTF2H3-209ENST00000542279 GGCXP38435 758 aa8.79□□□□□ -1
GTF2H3-209ENST00000542279 IL21Q9HBE4 155 aa8.79□□□□□ -1
GTF2H3-209ENST00000542279 PDZRN3Q9UPQ7 1066 aa8.79□□□□□ -1
GTF2H3-209ENST00000542279 PPP1R18Q6NYC8 613 aa8.78□□□□□ -1
GTF2H3-209ENST00000542279 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.78□□□□□ -1
GTF2H3-209ENST00000542279 TJAP1Q5JTD0 557 aa8.76□□□□□ -1.01
GTF2H3-209ENST00000542279 LCE2BO14633 110 aa8.75□□□□□ -1.01
GTF2H3-209ENST00000542279 MTRQ99707 1265 aa8.74□□□□□ -1.01
GTF2H3-209ENST00000542279 MAP3K7O43318 606 aa8.73□□□□□ -1.01
GTF2H3-209ENST00000542279 GTPBP6O43824 516 aaPredicted RBP8.73□□□□□ -1.01
GTF2H3-209ENST00000542279 SAMD7Q7Z3H4 446 aa8.73□□□□□ -1.01
GTF2H3-209ENST00000542279 DDX12PQ92771 950 aa8.73□□□□□ -1.01
GTF2H3-209ENST00000542279 ZNF775Q96BV0 537 aaPredicted RBP8.73□□□□□ -1.01
GTF2H3-209ENST00000542279 NECTIN2Q92692 538 aa8.72□□□□□ -1.01
GTF2H3-209ENST00000542279 RNF40O75150 1001 aa8.71□□□□□ -1.02
GTF2H3-209ENST00000542279 DPYSL4O14531 572 aa8.7□□□□□ -1.02
GTF2H3-209ENST00000542279 NBR1Q14596 966 aa8.69□□□□□ -1.02
GTF2H3-209ENST00000542279 CERKQ8TCT0 537 aa8.69□□□□□ -1.02
GTF2H3-209ENST00000542279 TSKSQ9UJT2 592 aa8.69□□□□□ -1.02
GTF2H3-209ENST00000542279 SLC4A3P48751 1232 aa8.68□□□□□ -1.02
GTF2H3-209ENST00000542279 NBPF26B4DH59 902 aa8.67□□□□□ -1.02
GTF2H3-209ENST00000542279 SMAPO00193 183 aa8.67□□□□□ -1.02
GTF2H3-209ENST00000542279 DCAF8L2P0C7V8 631 aa8.67□□□□□ -1.02
GTF2H3-209ENST00000542279 PKDCCQ504Y2 493 aa8.67□□□□□ -1.02
GTF2H3-209ENST00000542279 ZNF516Q92618 1163 aa8.67□□□□□ -1.02
GTF2H3-209ENST00000542279 CDCA7LQ96GN5 454 aa8.67□□□□□ -1.02
GTF2H3-209ENST00000542279 TMUB1Q9BVT8 246 aa8.67□□□□□ -1.02
GTF2H3-209ENST00000542279 PRSS12P56730 875 aa8.66□□□□□ -1.02
GTF2H3-209ENST00000542279 EN1Q05925 392 aaPredicted RBP8.66□□□□□ -1.02
GTF2H3-209ENST00000542279 PNMA3Q9UL41 463 aa8.66□□□□□ -1.02
GTF2H3-209ENST00000542279 TATDN2Q93075 761 aa8.65□□□□□ -1.02
GTF2H3-209ENST00000542279 CAMK2BQ13554 666 aa8.63□□□□□ -1.03
GTF2H3-209ENST00000542279 TSR1Q2NL82 804 aaKnown RBP8.63□□□□□ -1.03
GTF2H3-209ENST00000542279 DGAT1O75907 488 aa8.61□□□□□ -1.03
GTF2H3-209ENST00000542279 NKX2-3Q8TAU0 364 aa8.61□□□□□ -1.03
GTF2H3-209ENST00000542279 SPDYE16A6NNV3 312 aaPredicted RBP8.6□□□□□ -1.03
GTF2H3-209ENST00000542279 SLC19A1P41440 591 aa8.6□□□□□ -1.03
GTF2H3-209ENST00000542279 COPS2P61201 443 aa8.6□□□□□ -1.03
GTF2H3-209ENST00000542279 SLF2Q8IX21 1173 aa8.6□□□□□ -1.03
GTF2H3-209ENST00000542279 APLP1P51693 650 aa8.59□□□□□ -1.03
GTF2H3-209ENST00000542279 NUDT18Q6ZVK8 323 aa8.58□□□□□ -1.04
GTF2H3-209ENST00000542279 CADPS2Q86UW7 1296 aa8.58□□□□□ -1.04
GTF2H3-209ENST00000542279 PRR14Q9BWN1 585 aa8.58□□□□□ -1.04
GTF2H3-209ENST00000542279 ZPR1O75312 459 aa8.56□□□□□ -1.04
GTF2H3-209ENST00000542279 GRXCR2A6NFK2 248 aa8.55□□□□□ -1.04
GTF2H3-209ENST00000542279 MYT1Q01538 1121 aa8.55□□□□□ -1.04
GTF2H3-209ENST00000542279 PDIA6Q15084 440 aa8.53□□□□□ -1.04
GTF2H3-209ENST00000542279 ZNF598Q86UK7 904 aaKnown RBP8.53□□□□□ -1.04
GTF2H3-209ENST00000542279 FAM198AQ9UFP1 575 aa8.53□□□□□ -1.04
GTF2H3-209ENST00000542279 PCDHB3Q9Y5E6 796 aa8.53□□□□□ -1.04
GTF2H3-209ENST00000542279 FAM187AA6NFU0 413 aa8.52□□□□□ -1.05
GTF2H3-209ENST00000542279 SPRYD7Q5W111 196 aa8.52□□□□□ -1.05
GTF2H3-209ENST00000542279 PLCB2Q00722 1185 aa8.51□□□□□ -1.05
GTF2H3-209ENST00000542279 SWT1Q5T5J6 900 aaKnown RBP8.51□□□□□ -1.05
GTF2H3-209ENST00000542279 TREML4Q6UXN2 200 aa8.51□□□□□ -1.05
GTF2H3-209ENST00000542279 RNF223E7ERA6 249 aa8.5□□□□□ -1.05
GTF2H3-209ENST00000542279 RBM27Q9P2N5 1060 aaKnown RBP8.5□□□□□ -1.05
GTF2H3-209ENST00000542279 PRR20EP86478 221 aa8.49□□□□□ -1.05
GTF2H3-209ENST00000542279 PRR20CP86479 221 aa8.49□□□□□ -1.05
GTF2H3-209ENST00000542279 PRR20DP86480 221 aa8.49□□□□□ -1.05
GTF2H3-209ENST00000542279 PRR20BP86481 221 aa8.49□□□□□ -1.05
GTF2H3-209ENST00000542279 PRR20AP86496 221 aa8.49□□□□□ -1.05
GTF2H3-209ENST00000542279 POTECB2RU33 542 aa8.47□□□□□ -1.05
GTF2H3-209ENST00000542279 C3orf80F5H4A9 247 aa8.47□□□□□ -1.05
GTF2H3-209ENST00000542279 ZNF697Q5TEC3 545 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms