RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 PKD2Q13563 968 aa8.33□□□□□ -1.08
CLNS1A-208ENST00000527265 HS6ST3Q8IZP7 471 aa8.33□□□□□ -1.08
CLNS1A-208ENST00000527265 NRG2O14511 850 aaPredicted RBP8.32□□□□□ -1.08
CLNS1A-208ENST00000527265 PDE4AP27815 886 aa8.32□□□□□ -1.08
CLNS1A-208ENST00000527265 FBXW7Q969H0 707 aa8.31□□□□□ -1.08
CLNS1A-208ENST00000527265 LRCH3Q96II8 777 aa8.3□□□□□ -1.08
CLNS1A-208ENST00000527265 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.3□□□□□ -1.08
CLNS1A-208ENST00000527265 KIAA1468Q9P260 1216 aa8.3□□□□□ -1.08
CLNS1A-208ENST00000527265 TSR3Q9UJK0 312 aaKnown RBP8.3□□□□□ -1.08
CLNS1A-208ENST00000527265 ONECUT3O60422 494 aaPredicted RBP8.29□□□□□ -1.08
CLNS1A-208ENST00000527265 LCE2BO14633 110 aa8.28□□□□□ -1.08
CLNS1A-208ENST00000527265 COL9A1P20849 921 aa8.28□□□□□ -1.08
CLNS1A-208ENST00000527265 ZNF787Q6DD87 383 aa8.28□□□□□ -1.08
CLNS1A-208ENST00000527265 TYW1BQ6NUM6 668 aa8.28□□□□□ -1.08
CLNS1A-208ENST00000527265 PRKD2Q9BZL6 878 aa8.28□□□□□ -1.08
CLNS1A-208ENST00000527265 HPS5Q9UPZ3 1129 aa8.28□□□□□ -1.08
CLNS1A-208ENST00000527265 FAM98CQ17RN3 349 aaKnown RBP8.27□□□□□ -1.09
CLNS1A-208ENST00000527265 SEPT9Q9UHD8 586 aaPredicted RBP8.27□□□□□ -1.09
CLNS1A-208ENST00000527265 PCDHGA10Q9Y5H3 936 aa8.27□□□□□ -1.09
CLNS1A-208ENST00000527265 PHF14O94880 888 aa8.25□□□□□ -1.09
CLNS1A-208ENST00000527265 DDX27Q96GQ7 796 aaKnown RBP8.25□□□□□ -1.09
CLNS1A-208ENST00000527265 CHGAP10645 457 aaKnown RBP8.24□□□□□ -1.09
CLNS1A-208ENST00000527265 V9GY48 417 aaPredicted RBP8.24□□□□□ -1.09
CLNS1A-208ENST00000527265 LARP6Q9BRS8 491 aaKnown RBP8.23□□□□□ -1.09
CLNS1A-208ENST00000527265 NCKAP5LQ9HCH0 1330 aa8.23□□□□□ -1.09
CLNS1A-208ENST00000527265 TRIM6-TRIM34B2RNG4 842 aa8.22□□□□□ -1.09
CLNS1A-208ENST00000527265 PPP4CP60510 307 aa8.22□□□□□ -1.09
CLNS1A-208ENST00000527265 EPAS1Q99814 870 aa8.2□□□□□ -1.1
CLNS1A-208ENST00000527265 PDZRN3Q9UPQ7 1066 aa8.2□□□□□ -1.1
CLNS1A-208ENST00000527265 C6orf132Q5T0Z8 1188 aa8.19□□□□□ -1.1
CLNS1A-208ENST00000527265 ZNF775Q96BV0 537 aaPredicted RBP8.18□□□□□ -1.1
CLNS1A-208ENST00000527265 PPP1R18Q6NYC8 613 aa8.17□□□□□ -1.1
CLNS1A-208ENST00000527265 PACS2Q86VP3 889 aa8.17□□□□□ -1.1
CLNS1A-208ENST00000527265 DNAJC5Q9H3Z4 198 aa8.16□□□□□ -1.1
CLNS1A-208ENST00000527265 IL21Q9HBE4 155 aa8.16□□□□□ -1.1
CLNS1A-208ENST00000527265 GGCXP38435 758 aa8.15□□□□□ -1.1
CLNS1A-208ENST00000527265 TJAP1Q5JTD0 557 aa8.15□□□□□ -1.1
CLNS1A-208ENST00000527265 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.15□□□□□ -1.1
CLNS1A-208ENST00000527265 NKX1-1Q15270 411 aaPredicted RBP8.14□□□□□ -1.11
CLNS1A-208ENST00000527265 MTRQ99707 1265 aa8.14□□□□□ -1.11
CLNS1A-208ENST00000527265 EMILIN3Q9NT22 766 aa8.14□□□□□ -1.11
CLNS1A-208ENST00000527265 MFSD10Q14728 455 aa8.13□□□□□ -1.11
CLNS1A-208ENST00000527265 RBM33Q96EV2 1170 aaKnown RBP8.12□□□□□ -1.11
CLNS1A-208ENST00000527265 HDGFP51858 240 aaKnown RBP8.09□□□□□ -1.11
CLNS1A-208ENST00000527265 SAMD7Q7Z3H4 446 aa8.09□□□□□ -1.11
CLNS1A-208ENST00000527265 PKDCCQ504Y2 493 aa8.08□□□□□ -1.12
CLNS1A-208ENST00000527265 NECTIN2Q92692 538 aa8.08□□□□□ -1.12
CLNS1A-208ENST00000527265 RNF40O75150 1001 aa8.07□□□□□ -1.12
CLNS1A-208ENST00000527265 MAP3K7O43318 606 aa8.06□□□□□ -1.12
CLNS1A-208ENST00000527265 TSKSQ9UJT2 592 aa8.06□□□□□ -1.12
CLNS1A-208ENST00000527265 TMUB1Q9BVT8 246 aa8.05□□□□□ -1.12
CLNS1A-208ENST00000527265 NBPF26B4DH59 902 aa8.04□□□□□ -1.12
CLNS1A-208ENST00000527265 ZNF516Q92618 1163 aa8.04□□□□□ -1.12
CLNS1A-208ENST00000527265 DDX12PQ92771 950 aa8.04□□□□□ -1.12
CLNS1A-208ENST00000527265 NBR1Q14596 966 aa8.03□□□□□ -1.12
CLNS1A-208ENST00000527265 DPYSL4O14531 572 aa8.02□□□□□ -1.13
CLNS1A-208ENST00000527265 EN1Q05925 392 aaPredicted RBP8.02□□□□□ -1.13
CLNS1A-208ENST00000527265 SMAPO00193 183 aa8.01□□□□□ -1.13
CLNS1A-208ENST00000527265 DGAT1O75907 488 aa8.01□□□□□ -1.13
CLNS1A-208ENST00000527265 CERKQ8TCT0 537 aa8.01□□□□□ -1.13
CLNS1A-208ENST00000527265 CDCA7LQ96GN5 454 aa8.01□□□□□ -1.13
CLNS1A-208ENST00000527265 SLC4A3P48751 1232 aa8□□□□□ -1.13
CLNS1A-208ENST00000527265 GTPBP6O43824 516 aaPredicted RBP7.99□□□□□ -1.13
CLNS1A-208ENST00000527265 PRSS12P56730 875 aa7.99□□□□□ -1.13
CLNS1A-208ENST00000527265 TSR1Q2NL82 804 aaKnown RBP7.99□□□□□ -1.13
CLNS1A-208ENST00000527265 NKX2-3Q8TAU0 364 aa7.99□□□□□ -1.13
CLNS1A-208ENST00000527265 PNMA3Q9UL41 463 aa7.99□□□□□ -1.13
CLNS1A-208ENST00000527265 SLC19A1P41440 591 aa7.98□□□□□ -1.13
CLNS1A-208ENST00000527265 APLP1P51693 650 aa7.98□□□□□ -1.13
CLNS1A-208ENST00000527265 COPS2P61201 443 aa7.98□□□□□ -1.13
CLNS1A-208ENST00000527265 MYT1Q01538 1121 aa7.98□□□□□ -1.13
CLNS1A-208ENST00000527265 TATDN2Q93075 761 aa7.98□□□□□ -1.13
CLNS1A-208ENST00000527265 CAMK2BQ13554 666 aa7.96□□□□□ -1.14
CLNS1A-208ENST00000527265 TREML4Q6UXN2 200 aa7.96□□□□□ -1.14
CLNS1A-208ENST00000527265 SLF2Q8IX21 1173 aa7.95□□□□□ -1.14
CLNS1A-208ENST00000527265 PRR14Q9BWN1 585 aa7.95□□□□□ -1.14
CLNS1A-208ENST00000527265 FAM187AA6NFU0 413 aa7.94□□□□□ -1.14
CLNS1A-208ENST00000527265 ZPR1O75312 459 aa7.94□□□□□ -1.14
CLNS1A-208ENST00000527265 PRR20EP86478 221 aa7.94□□□□□ -1.14
CLNS1A-208ENST00000527265 PRR20CP86479 221 aa7.94□□□□□ -1.14
CLNS1A-208ENST00000527265 PRR20DP86480 221 aa7.94□□□□□ -1.14
CLNS1A-208ENST00000527265 PRR20BP86481 221 aa7.94□□□□□ -1.14
CLNS1A-208ENST00000527265 PRR20AP86496 221 aa7.94□□□□□ -1.14
CLNS1A-208ENST00000527265 DCAF8L2P0C7V8 631 aa7.93□□□□□ -1.14
CLNS1A-208ENST00000527265 TRIM67Q6ZTA4 783 aa7.93□□□□□ -1.14
CLNS1A-208ENST00000527265 ZNF598Q86UK7 904 aaKnown RBP7.93□□□□□ -1.14
CLNS1A-208ENST00000527265 POTECB2RU33 542 aa7.91□□□□□ -1.14
CLNS1A-208ENST00000527265 SPRYD7Q5W111 196 aa7.91□□□□□ -1.14
CLNS1A-208ENST00000527265 NUDT18Q6ZVK8 323 aa7.91□□□□□ -1.14
CLNS1A-208ENST00000527265 RNF223E7ERA6 249 aa7.9□□□□□ -1.14
CLNS1A-208ENST00000527265 STK17AQ9UEE5 414 aa7.9□□□□□ -1.14
CLNS1A-208ENST00000527265 SPDYE16A6NNV3 312 aaPredicted RBP7.89□□□□□ -1.15
CLNS1A-208ENST00000527265 PDIA6Q15084 440 aa7.89□□□□□ -1.15
CLNS1A-208ENST00000527265 ZNF697Q5TEC3 545 aa7.89□□□□□ -1.15
CLNS1A-208ENST00000527265 RBM27Q9P2N5 1060 aaKnown RBP7.89□□□□□ -1.15
CLNS1A-208ENST00000527265 FAM198AQ9UFP1 575 aa7.89□□□□□ -1.15
CLNS1A-208ENST00000527265 PCDHB3Q9Y5E6 796 aa7.89□□□□□ -1.15
CLNS1A-208ENST00000527265 CADPS2Q86UW7 1296 aa7.88□□□□□ -1.15
CLNS1A-208ENST00000527265 ANKLE1Q8NAG6 615 aa7.88□□□□□ -1.15
CLNS1A-208ENST00000527265 SWT1Q5T5J6 900 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms