RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 CALD1Q05682 793 aaKnown RBP8.69□□□□□ -1.02
SDC2-208ENST00000523877 CCER1Q8TC90 406 aaPredicted RBP8.69□□□□□ -1.02
SDC2-208ENST00000523877 MMP14P50281 582 aa8.68□□□□□ -1.02
SDC2-208ENST00000523877 FAM50AQ14320 339 aaKnown RBP8.68□□□□□ -1.02
SDC2-208ENST00000523877 AEBP1Q8IUX7 1158 aa8.68□□□□□ -1.02
SDC2-208ENST00000523877 CEP120Q8N960 986 aa8.68□□□□□ -1.02
SDC2-208ENST00000523877 ZBTB47Q9UFB7 747 aaPredicted RBP8.68□□□□□ -1.02
SDC2-208ENST00000523877 LOC102724159A0A0B4J2E5 919 aa8.67□□□□□ -1.02
SDC2-208ENST00000523877 APBB1O00213 710 aa8.67□□□□□ -1.02
SDC2-208ENST00000523877 NUBP1P53384 320 aa8.67□□□□□ -1.02
SDC2-208ENST00000523877 PWP2Q15269 919 aaKnown RBP8.67□□□□□ -1.02
SDC2-208ENST00000523877 NEUROD2Q15784 382 aa8.67□□□□□ -1.02
SDC2-208ENST00000523877 TMTC2Q8N394 836 aa8.67□□□□□ -1.02
SDC2-208ENST00000523877 LAS1LQ9Y4W2 734 aaKnown RBP8.67□□□□□ -1.02
SDC2-208ENST00000523877 ARID3CA6NKF2 412 aa8.66□□□□□ -1.02
SDC2-208ENST00000523877 TRAIPQ9BWF2 469 aa8.65□□□□□ -1.02
SDC2-208ENST00000523877 TRIM35Q9UPQ4 493 aa8.65□□□□□ -1.02
SDC2-208ENST00000523877 PCDHB13Q9Y5F0 798 aa8.65□□□□□ -1.02
SDC2-208ENST00000523877 PCDH10Q9P2E7 1040 aa8.64□□□□□ -1.03
SDC2-208ENST00000523877 CADPSQ9ULU8 1353 aa8.63□□□□□ -1.03
SDC2-208ENST00000523877 TTC36A6NLP5 189 aa8.63□□□□□ -1.03
SDC2-208ENST00000523877 ANP32AP39687 249 aaKnown RBP8.63□□□□□ -1.03
SDC2-208ENST00000523877 VASPP50552 380 aaPredicted RBP8.63□□□□□ -1.03
SDC2-208ENST00000523877 SPTY2D1Q68D10 685 aaPredicted RBP8.63□□□□□ -1.03
SDC2-208ENST00000523877 NBPF11Q86T75 865 aa8.63□□□□□ -1.03
SDC2-208ENST00000523877 IFNL1Q8IU54 200 aa8.63□□□□□ -1.03
SDC2-208ENST00000523877 RIPOR2Q9Y4F9 1068 aa8.63□□□□□ -1.03
SDC2-208ENST00000523877 SEC24BO95487 1268 aa8.62□□□□□ -1.03
SDC2-208ENST00000523877 IRX3P78415 501 aaPredicted RBP8.62□□□□□ -1.03
SDC2-208ENST00000523877 NBPF20Q3BBV1 942 aa8.62□□□□□ -1.03
SDC2-208ENST00000523877 CASC1Q6TDU7 716 aa8.62□□□□□ -1.03
SDC2-208ENST00000523877 NOL8Q76FK4 1167 aaKnown RBP8.62□□□□□ -1.03
SDC2-208ENST00000523877 SGIP1Q9BQI5 828 aa8.62□□□□□ -1.03
SDC2-208ENST00000523877 CENPJQ9HC77 1338 aaPredicted RBP8.61□□□□□ -1.03
SDC2-208ENST00000523877 HSP90AA2PQ14568 343 aaPredicted RBP8.61□□□□□ -1.03
SDC2-208ENST00000523877 NBPF1Q3BBV0 1214 aa8.61□□□□□ -1.03
SDC2-208ENST00000523877 FAM9BQ8IZU0 186 aa8.61□□□□□ -1.03
SDC2-208ENST00000523877 GZF1Q9H116 711 aaPredicted RBP8.61□□□□□ -1.03
SDC2-208ENST00000523877 C11orf95C9JLR9 678 aaPredicted RBP8.6□□□□□ -1.03
SDC2-208ENST00000523877 APPP05067 770 aa8.6□□□□□ -1.03
SDC2-208ENST00000523877 PKD2Q13563 968 aa8.6□□□□□ -1.03
SDC2-208ENST00000523877 ANKRD13AQ8IZ07 590 aa8.6□□□□□ -1.03
SDC2-208ENST00000523877 MYH16Q9H6N6 1097 aa8.6□□□□□ -1.03
SDC2-208ENST00000523877 HDAC5Q9UQL6 1122 aa8.6□□□□□ -1.03
SDC2-208ENST00000523877 HMGB1P1B2RPK0 211 aaPredicted RBP8.59□□□□□ -1.03
SDC2-208ENST00000523877 NRDCO43847 1150 aa8.59□□□□□ -1.03
SDC2-208ENST00000523877 IER5LQ5T953 404 aa8.59□□□□□ -1.03
SDC2-208ENST00000523877 FANCIQ9NVI1 1328 aa8.57□□□□□ -1.04
SDC2-208ENST00000523877 TSHZ1Q6ZSZ6 1077 aa8.57□□□□□ -1.04
SDC2-208ENST00000523877 TMEM106CQ9BVX2 250 aa8.57□□□□□ -1.04
SDC2-208ENST00000523877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.57□□□□□ -1.04
SDC2-208ENST00000523877 ZNF316A6NFI3 1004 aaPredicted RBP8.56□□□□□ -1.04
SDC2-208ENST00000523877 FAM212AQ96EL1 285 aa8.56□□□□□ -1.04
SDC2-208ENST00000523877 CALRP27797 417 aaKnown RBP8.55□□□□□ -1.04
SDC2-208ENST00000523877 IL27Q8NEV9 243 aa8.55□□□□□ -1.04
SDC2-208ENST00000523877 PRDM4Q9UKN5 801 aa8.55□□□□□ -1.04
SDC2-208ENST00000523877 ERCC3P19447 782 aa8.54□□□□□ -1.04
SDC2-208ENST00000523877 GORABQ5T7V8 394 aa8.54□□□□□ -1.04
SDC2-208ENST00000523877 DCAF8Q5TAQ9 597 aa8.54□□□□□ -1.04
SDC2-208ENST00000523877 RINLQ6ZS11 566 aa8.54□□□□□ -1.04
SDC2-208ENST00000523877 NOP58Q9Y2X3 529 aaKnown RBP8.54□□□□□ -1.04
SDC2-208ENST00000523877 IRX5P78411 483 aaPredicted RBP8.53□□□□□ -1.04
SDC2-208ENST00000523877 CC2D1BQ5T0F9 858 aaKnown RBP8.53□□□□□ -1.04
SDC2-208ENST00000523877 SLAIN1Q8ND83 568 aa8.53□□□□□ -1.04
SDC2-208ENST00000523877 SGSM3Q96HU1 749 aa8.52□□□□□ -1.05
SDC2-208ENST00000523877 TERF2IPQ9NYB0 399 aa8.52□□□□□ -1.05
SDC2-208ENST00000523877 NACADO15069 1562 aa8.52□□□□□ -1.05
SDC2-208ENST00000523877 CECR2Q9BXF3 1484 aa8.51□□□□□ -1.05
SDC2-208ENST00000523877 TPD52L2O43399 206 aaKnown RBP8.51□□□□□ -1.05
SDC2-208ENST00000523877 FOXD4L6Q3SYB3 417 aaPredicted RBP8.51□□□□□ -1.05
SDC2-208ENST00000523877 FOXD4L3Q6VB84 417 aaPredicted RBP8.51□□□□□ -1.05
SDC2-208ENST00000523877 ST18O60284 1047 aa8.5□□□□□ -1.05
SDC2-208ENST00000523877 BRD1O95696 1058 aa8.5□□□□□ -1.05
SDC2-208ENST00000523877 PYGBP11216 843 aa8.5□□□□□ -1.05
SDC2-208ENST00000523877 IFNLR1Q8IU57 520 aaPredicted RBP8.5□□□□□ -1.05
SDC2-208ENST00000523877 CDAN1Q8IWY9 1227 aa8.5□□□□□ -1.05
SDC2-208ENST00000523877 ANP32CO43423 234 aa8.49□□□□□ -1.05
SDC2-208ENST00000523877 PLCG2P16885 1265 aa8.49□□□□□ -1.05
SDC2-208ENST00000523877 NBPF9Q3BBW0 867 aa8.49□□□□□ -1.05
SDC2-208ENST00000523877 GOLIM4O00461 696 aa8.48□□□□□ -1.05
SDC2-208ENST00000523877 MARCH6O60337 910 aa8.48□□□□□ -1.05
SDC2-208ENST00000523877 HSP90AA1P07900 732 aaKnown RBP8.48□□□□□ -1.05
SDC2-208ENST00000523877 MYBPC2Q14324 1141 aa8.48□□□□□ -1.05
SDC2-208ENST00000523877 SETDB1Q15047 1291 aa8.48□□□□□ -1.05
SDC2-208ENST00000523877 RALBP1Q15311 655 aa8.48□□□□□ -1.05
SDC2-208ENST00000523877 HSP90AB3PQ58FF7 597 aa8.48□□□□□ -1.05
SDC2-208ENST00000523877 CCDC82Q8N4S0 544 aa8.48□□□□□ -1.05
SDC2-208ENST00000523877 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.48□□□□□ -1.05
SDC2-208ENST00000523877 TCERG1O14776 1098 aaKnown RBP8.47□□□□□ -1.05
SDC2-208ENST00000523877 TAF3Q5VWG9 929 aa8.47□□□□□ -1.05
SDC2-208ENST00000523877 PCDHB8Q9UN66 801 aa8.47□□□□□ -1.05
SDC2-208ENST00000523877 SOX12O15370 315 aa8.46□□□□□ -1.06
SDC2-208ENST00000523877 SMARCA5O60264 1052 aaPredicted RBP8.46□□□□□ -1.06
SDC2-208ENST00000523877 PSEN1P49768 467 aa8.46□□□□□ -1.06
SDC2-208ENST00000523877 FBXW7Q969H0 707 aa8.46□□□□□ -1.06
SDC2-208ENST00000523877 SPATA32Q96LK8 384 aa8.46□□□□□ -1.06
SDC2-208ENST00000523877 ZNF830Q96NB3 372 aaPredicted RBP8.46□□□□□ -1.06
SDC2-208ENST00000523877 SH3BP1Q9Y3L3 701 aa8.46□□□□□ -1.06
SDC2-208ENST00000523877 HDAC1Q13547 482 aaPredicted RBP8.45□□□□□ -1.06
SDC2-208ENST00000523877 GSE1Q14687 1217 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms