RNA–Protein interactions for RNA: ENST00000517012.1

RNU6-388P-201, Transcript of RNA, U6 small nuclear 388, pseudogene, humanhuman

BASIC

Gene RNU6-388P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-388P-201ENST00000517012 FBXW7Q969H0 707 aa8.28□□□□□ -1.08
RNU6-388P-201ENST00000517012 LCE2BO14633 110 aa8.27□□□□□ -1.09
RNU6-388P-201ENST00000517012 MAP3K9P80192 1104 aa8.27□□□□□ -1.09
RNU6-388P-201ENST00000517012 COL9A1P20849 921 aa8.26□□□□□ -1.09
RNU6-388P-201ENST00000517012 PCDHGA10Q9Y5H3 936 aa8.26□□□□□ -1.09
RNU6-388P-201ENST00000517012 DNAJC5Q9H3Z4 198 aa8.25□□□□□ -1.09
RNU6-388P-201ENST00000517012 KIAA1468Q9P260 1216 aa8.25□□□□□ -1.09
RNU6-388P-201ENST00000517012 NRG2O14511 850 aaPredicted RBP8.24□□□□□ -1.09
RNU6-388P-201ENST00000517012 TYW1BQ6NUM6 668 aa8.24□□□□□ -1.09
RNU6-388P-201ENST00000517012 TSR3Q9UJK0 312 aaKnown RBP8.24□□□□□ -1.09
RNU6-388P-201ENST00000517012 NCKAP5LQ9HCH0 1330 aa8.24□□□□□ -1.09
RNU6-388P-201ENST00000517012 PHF14O94880 888 aa8.23□□□□□ -1.09
RNU6-388P-201ENST00000517012 FAM98CQ17RN3 349 aaKnown RBP8.22□□□□□ -1.09
RNU6-388P-201ENST00000517012 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.22□□□□□ -1.09
RNU6-388P-201ENST00000517012 DDX27Q96GQ7 796 aaKnown RBP8.21□□□□□ -1.1
RNU6-388P-201ENST00000517012 CHGAP10645 457 aaKnown RBP8.2□□□□□ -1.1
RNU6-388P-201ENST00000517012 LRCH3Q96II8 777 aa8.2□□□□□ -1.1
RNU6-388P-201ENST00000517012 HPS5Q9UPZ3 1129 aa8.2□□□□□ -1.1
RNU6-388P-201ENST00000517012 LARP6Q9BRS8 491 aaKnown RBP8.19□□□□□ -1.1
RNU6-388P-201ENST00000517012 PRKD2Q9BZL6 878 aa8.19□□□□□ -1.1
RNU6-388P-201ENST00000517012 SEPT9Q9UHD8 586 aaPredicted RBP8.19□□□□□ -1.1
RNU6-388P-201ENST00000517012 V9GY48 417 aaPredicted RBP8.19□□□□□ -1.1
RNU6-388P-201ENST00000517012 TRIM6-TRIM34B2RNG4 842 aa8.18□□□□□ -1.1
RNU6-388P-201ENST00000517012 NKX1-1Q15270 411 aaPredicted RBP8.18□□□□□ -1.1
RNU6-388P-201ENST00000517012 MFSD10Q14728 455 aa8.17□□□□□ -1.1
RNU6-388P-201ENST00000517012 ZNF787Q6DD87 383 aa8.17□□□□□ -1.1
RNU6-388P-201ENST00000517012 EPAS1Q99814 870 aa8.17□□□□□ -1.1
RNU6-388P-201ENST00000517012 C6orf132Q5T0Z8 1188 aa8.16□□□□□ -1.1
RNU6-388P-201ENST00000517012 EMILIN3Q9NT22 766 aa8.15□□□□□ -1.1
RNU6-388P-201ENST00000517012 PPP4CP60510 307 aa8.14□□□□□ -1.11
RNU6-388P-201ENST00000517012 TJAP1Q5JTD0 557 aa8.13□□□□□ -1.11
RNU6-388P-201ENST00000517012 PPP1R18Q6NYC8 613 aa8.11□□□□□ -1.11
RNU6-388P-201ENST00000517012 PACS2Q86VP3 889 aa8.11□□□□□ -1.11
RNU6-388P-201ENST00000517012 IL21Q9HBE4 155 aa8.11□□□□□ -1.11
RNU6-388P-201ENST00000517012 ZNF775Q96BV0 537 aaPredicted RBP8.1□□□□□ -1.11
RNU6-388P-201ENST00000517012 PDZRN3Q9UPQ7 1066 aa8.1□□□□□ -1.11
RNU6-388P-201ENST00000517012 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.08□□□□□ -1.12
RNU6-388P-201ENST00000517012 MTRQ99707 1265 aa8.07□□□□□ -1.12
RNU6-388P-201ENST00000517012 GGCXP38435 758 aa8.04□□□□□ -1.12
RNU6-388P-201ENST00000517012 RBM33Q96EV2 1170 aaKnown RBP8.04□□□□□ -1.12
RNU6-388P-201ENST00000517012 TSKSQ9UJT2 592 aa8.04□□□□□ -1.12
RNU6-388P-201ENST00000517012 GTPBP6O43824 516 aaPredicted RBP8.03□□□□□ -1.12
RNU6-388P-201ENST00000517012 SAMD7Q7Z3H4 446 aa8.03□□□□□ -1.12
RNU6-388P-201ENST00000517012 CAMK2BQ13554 666 aa8.01□□□□□ -1.13
RNU6-388P-201ENST00000517012 TMUB1Q9BVT8 246 aa8.01□□□□□ -1.13
RNU6-388P-201ENST00000517012 EN1Q05925 392 aaPredicted RBP8□□□□□ -1.13
RNU6-388P-201ENST00000517012 ZNF516Q92618 1163 aa8□□□□□ -1.13
RNU6-388P-201ENST00000517012 HDGFP51858 240 aaKnown RBP7.99□□□□□ -1.13
RNU6-388P-201ENST00000517012 NECTIN2Q92692 538 aa7.99□□□□□ -1.13
RNU6-388P-201ENST00000517012 DDX12PQ92771 950 aa7.99□□□□□ -1.13
RNU6-388P-201ENST00000517012 DPYSL4O14531 572 aa7.98□□□□□ -1.13
RNU6-388P-201ENST00000517012 MAP3K7O43318 606 aa7.98□□□□□ -1.13
RNU6-388P-201ENST00000517012 CERKQ8TCT0 537 aa7.98□□□□□ -1.13
RNU6-388P-201ENST00000517012 CDCA7LQ96GN5 454 aa7.97□□□□□ -1.13
RNU6-388P-201ENST00000517012 NBPF26B4DH59 902 aa7.96□□□□□ -1.14
RNU6-388P-201ENST00000517012 PRSS12P56730 875 aa7.96□□□□□ -1.14
RNU6-388P-201ENST00000517012 NBR1Q14596 966 aa7.96□□□□□ -1.14
RNU6-388P-201ENST00000517012 TSR1Q2NL82 804 aaKnown RBP7.96□□□□□ -1.14
RNU6-388P-201ENST00000517012 SMAPO00193 183 aa7.95□□□□□ -1.14
RNU6-388P-201ENST00000517012 DGAT1O75907 488 aa7.95□□□□□ -1.14
RNU6-388P-201ENST00000517012 PKDCCQ504Y2 493 aa7.95□□□□□ -1.14
RNU6-388P-201ENST00000517012 NKX2-3Q8TAU0 364 aa7.95□□□□□ -1.14
RNU6-388P-201ENST00000517012 TATDN2Q93075 761 aa7.95□□□□□ -1.14
RNU6-388P-201ENST00000517012 APLP1P51693 650 aa7.94□□□□□ -1.14
RNU6-388P-201ENST00000517012 MYT1Q01538 1121 aa7.93□□□□□ -1.14
RNU6-388P-201ENST00000517012 PNMA3Q9UL41 463 aa7.93□□□□□ -1.14
RNU6-388P-201ENST00000517012 RNF40O75150 1001 aa7.92□□□□□ -1.14
RNU6-388P-201ENST00000517012 TRIM67Q6ZTA4 783 aa7.92□□□□□ -1.14
RNU6-388P-201ENST00000517012 PRR20EP86478 221 aa7.91□□□□□ -1.14
RNU6-388P-201ENST00000517012 PRR20CP86479 221 aa7.91□□□□□ -1.14
RNU6-388P-201ENST00000517012 PRR20DP86480 221 aa7.91□□□□□ -1.14
RNU6-388P-201ENST00000517012 PRR20BP86481 221 aa7.91□□□□□ -1.14
RNU6-388P-201ENST00000517012 PRR20AP86496 221 aa7.91□□□□□ -1.14
RNU6-388P-201ENST00000517012 CADPS2Q86UW7 1296 aa7.91□□□□□ -1.14
RNU6-388P-201ENST00000517012 FAM198AQ9UFP1 575 aa7.91□□□□□ -1.14
RNU6-388P-201ENST00000517012 SLC19A1P41440 591 aa7.9□□□□□ -1.14
RNU6-388P-201ENST00000517012 ZPR1O75312 459 aa7.89□□□□□ -1.15
RNU6-388P-201ENST00000517012 COPS2P61201 443 aa7.89□□□□□ -1.15
RNU6-388P-201ENST00000517012 PDIA6Q15084 440 aa7.89□□□□□ -1.15
RNU6-388P-201ENST00000517012 TREML4Q6UXN2 200 aa7.89□□□□□ -1.15
RNU6-388P-201ENST00000517012 RBM27Q9P2N5 1060 aaKnown RBP7.89□□□□□ -1.15
RNU6-388P-201ENST00000517012 SPDYE16A6NNV3 312 aaPredicted RBP7.88□□□□□ -1.15
RNU6-388P-201ENST00000517012 ZNF598Q86UK7 904 aaKnown RBP7.88□□□□□ -1.15
RNU6-388P-201ENST00000517012 SLF2Q8IX21 1173 aa7.88□□□□□ -1.15
RNU6-388P-201ENST00000517012 POTECB2RU33 542 aa7.87□□□□□ -1.15
RNU6-388P-201ENST00000517012 C3orf80F5H4A9 247 aa7.87□□□□□ -1.15
RNU6-388P-201ENST00000517012 SLC4A3P48751 1232 aa7.87□□□□□ -1.15
RNU6-388P-201ENST00000517012 SPRYD7Q5W111 196 aa7.87□□□□□ -1.15
RNU6-388P-201ENST00000517012 NUDT18Q6ZVK8 323 aa7.87□□□□□ -1.15
RNU6-388P-201ENST00000517012 PRR14Q9BWN1 585 aa7.87□□□□□ -1.15
RNU6-388P-201ENST00000517012 LCE2AQ5TA79 106 aaPredicted RBP7.86□□□□□ -1.15
RNU6-388P-201ENST00000517012 RNF223E7ERA6 249 aa7.85□□□□□ -1.15
RNU6-388P-201ENST00000517012 FAM187AA6NFU0 413 aa7.83□□□□□ -1.16
RNU6-388P-201ENST00000517012 ANKLE1Q8NAG6 615 aa7.83□□□□□ -1.16
RNU6-388P-201ENST00000517012 SWT1Q5T5J6 900 aaKnown RBP7.82□□□□□ -1.16
RNU6-388P-201ENST00000517012 EMID1Q96A84 441 aaPredicted RBP7.82□□□□□ -1.16
RNU6-388P-201ENST00000517012 PCDHB3Q9Y5E6 796 aa7.82□□□□□ -1.16
RNU6-388P-201ENST00000517012 ZNF697Q5TEC3 545 aa7.81□□□□□ -1.16
RNU6-388P-201ENST00000517012 GDF9O60383 454 aa7.79□□□□□ -1.16
RNU6-388P-201ENST00000517012 AAASQ9NRG9 546 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms