RNA–Protein interactions for RNA: ENST00000511333.5

MATR3-217, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-217ENST00000511333 PCDHGA10Q9Y5H3 936 aa11.35□□□□□ -0.59
MATR3-217ENST00000511333 ZNF787Q6DD87 383 aa11.34□□□□□ -0.59
MATR3-217ENST00000511333 TSR3Q9UJK0 312 aaKnown RBP11.34□□□□□ -0.59
MATR3-217ENST00000511333 V9GY48 417 aaPredicted RBP11.34□□□□□ -0.59
MATR3-217ENST00000511333 HS6ST3Q8IZP7 471 aa11.33□□□□□ -0.6
MATR3-217ENST00000511333 ZNF775Q96BV0 537 aaPredicted RBP11.33□□□□□ -0.6
MATR3-217ENST00000511333 PRKD2Q9BZL6 878 aa11.33□□□□□ -0.6
MATR3-217ENST00000511333 KIAA1468Q9P260 1216 aa11.32□□□□□ -0.6
MATR3-217ENST00000511333 FBXW7Q969H0 707 aa11.31□□□□□ -0.6
MATR3-217ENST00000511333 NCKAP5LQ9HCH0 1330 aa11.31□□□□□ -0.6
MATR3-217ENST00000511333 FAM98CQ17RN3 349 aaKnown RBP11.3□□□□□ -0.6
MATR3-217ENST00000511333 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.28□□□□□ -0.6
MATR3-217ENST00000511333 HPS5Q9UPZ3 1129 aa11.28□□□□□ -0.6
MATR3-217ENST00000511333 TYW1BQ6NUM6 668 aa11.27□□□□□ -0.61
MATR3-217ENST00000511333 SEPT9Q9UHD8 586 aaPredicted RBP11.27□□□□□ -0.61
MATR3-217ENST00000511333 PHF14O94880 888 aa11.26□□□□□ -0.61
MATR3-217ENST00000511333 TJAP1Q5JTD0 557 aa11.26□□□□□ -0.61
MATR3-217ENST00000511333 DNAJC5Q9H3Z4 198 aa11.26□□□□□ -0.61
MATR3-217ENST00000511333 LRCH3Q96II8 777 aa11.25□□□□□ -0.61
MATR3-217ENST00000511333 TRIM6-TRIM34B2RNG4 842 aa11.24□□□□□ -0.61
MATR3-217ENST00000511333 PDE4AP27815 886 aa11.23□□□□□ -0.61
MATR3-217ENST00000511333 MAP3K9P80192 1104 aa11.21□□□□□ -0.61
MATR3-217ENST00000511333 PPP1R18Q6NYC8 613 aa11.2□□□□□ -0.62
MATR3-217ENST00000511333 MFSD10Q14728 455 aa11.19□□□□□ -0.62
MATR3-217ENST00000511333 RYDENQ9NUL5 291 aaKnown RBP11.19□□□□□ -0.62
MATR3-217ENST00000511333 PDZRN3Q9UPQ7 1066 aa11.19□□□□□ -0.62
MATR3-217ENST00000511333 EMILIN3Q9NT22 766 aa11.18□□□□□ -0.62
MATR3-217ENST00000511333 NKX1-1Q15270 411 aaPredicted RBP11.17□□□□□ -0.62
MATR3-217ENST00000511333 C6orf132Q5T0Z8 1188 aa11.17□□□□□ -0.62
MATR3-217ENST00000511333 DDX27Q96GQ7 796 aaKnown RBP11.16□□□□□ -0.62
MATR3-217ENST00000511333 EPAS1Q99814 870 aa11.15□□□□□ -0.62
MATR3-217ENST00000511333 IL21Q9HBE4 155 aa11.15□□□□□ -0.62
MATR3-217ENST00000511333 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.15□□□□□ -0.62
MATR3-217ENST00000511333 MTRQ99707 1265 aa11.14□□□□□ -0.63
MATR3-217ENST00000511333 PPP4CP60510 307 aa11.13□□□□□ -0.63
MATR3-217ENST00000511333 LCE2AQ5TA79 106 aaPredicted RBP11.12□□□□□ -0.63
MATR3-217ENST00000511333 LARP6Q9BRS8 491 aaKnown RBP11.1□□□□□ -0.63
MATR3-217ENST00000511333 TRIM67Q6ZTA4 783 aa11.06□□□□□ -0.64
MATR3-217ENST00000511333 TSKSQ9UJT2 592 aa11.06□□□□□ -0.64
MATR3-217ENST00000511333 ZNF516Q92618 1163 aa11.04□□□□□ -0.64
MATR3-217ENST00000511333 MYT1Q01538 1121 aa11.03□□□□□ -0.64
MATR3-217ENST00000511333 SAMD7Q7Z3H4 446 aa11.03□□□□□ -0.64
MATR3-217ENST00000511333 PACS2Q86VP3 889 aa11.03□□□□□ -0.64
MATR3-217ENST00000511333 TMUB1Q9BVT8 246 aa11.02□□□□□ -0.65
MATR3-217ENST00000511333 DGAT1O75907 488 aa11.01□□□□□ -0.65
MATR3-217ENST00000511333 CHGAP10645 457 aaKnown RBP11.01□□□□□ -0.65
MATR3-217ENST00000511333 TREML4Q6UXN2 200 aa11.01□□□□□ -0.65
MATR3-217ENST00000511333 POTECB2RU33 542 aa10.99□□□□□ -0.65
MATR3-217ENST00000511333 GGCXP38435 758 aa10.99□□□□□ -0.65
MATR3-217ENST00000511333 PRR20EP86478 221 aa10.98□□□□□ -0.65
MATR3-217ENST00000511333 PRR20CP86479 221 aa10.98□□□□□ -0.65
MATR3-217ENST00000511333 PRR20DP86480 221 aa10.98□□□□□ -0.65
MATR3-217ENST00000511333 PRR20BP86481 221 aa10.98□□□□□ -0.65
MATR3-217ENST00000511333 PRR20AP86496 221 aa10.98□□□□□ -0.65
MATR3-217ENST00000511333 NKX2-3Q8TAU0 364 aa10.97□□□□□ -0.65
MATR3-217ENST00000511333 CAMK2BQ13554 666 aa10.96□□□□□ -0.65
MATR3-217ENST00000511333 PKDCCQ504Y2 493 aa10.96□□□□□ -0.65
MATR3-217ENST00000511333 APLP1P51693 650 aa10.95□□□□□ -0.66
MATR3-217ENST00000511333 EN1Q05925 392 aaPredicted RBP10.95□□□□□ -0.66
MATR3-217ENST00000511333 EMID1Q96A84 441 aaPredicted RBP10.94□□□□□ -0.66
MATR3-217ENST00000511333 RBM33Q96EV2 1170 aaKnown RBP10.94□□□□□ -0.66
MATR3-217ENST00000511333 FAM198AQ9UFP1 575 aa10.92□□□□□ -0.66
MATR3-217ENST00000511333 TSR1Q2NL82 804 aaKnown RBP10.91□□□□□ -0.66
MATR3-217ENST00000511333 C3orf80F5H4A9 247 aa10.9□□□□□ -0.66
MATR3-217ENST00000511333 SMAPO00193 183 aa10.9□□□□□ -0.66
MATR3-217ENST00000511333 GTPBP6O43824 516 aaPredicted RBP10.9□□□□□ -0.66
MATR3-217ENST00000511333 CDCA7LQ96GN5 454 aa10.9□□□□□ -0.66
MATR3-217ENST00000511333 SLC19A1P41440 591 aa10.88□□□□□ -0.67
MATR3-217ENST00000511333 PRSS12P56730 875 aa10.88□□□□□ -0.67
MATR3-217ENST00000511333 STK17AQ9UEE5 414 aa10.88□□□□□ -0.67
MATR3-217ENST00000511333 NBPF26B4DH59 902 aa10.87□□□□□ -0.67
MATR3-217ENST00000511333 DPYSL4O14531 572 aa10.87□□□□□ -0.67
MATR3-217ENST00000511333 SPRYD7Q5W111 196 aa10.87□□□□□ -0.67
MATR3-217ENST00000511333 NECTIN2Q92692 538 aa10.87□□□□□ -0.67
MATR3-217ENST00000511333 TATDN2Q93075 761 aa10.87□□□□□ -0.67
MATR3-217ENST00000511333 ZNF598Q86UK7 904 aaKnown RBP10.86□□□□□ -0.67
MATR3-217ENST00000511333 DDX12PQ92771 950 aa10.86□□□□□ -0.67
MATR3-217ENST00000511333 LOC100996750A0A140TA64 210 aa10.85□□□□□ -0.67
MATR3-217ENST00000511333 MAP3K7O43318 606 aa10.85□□□□□ -0.67
MATR3-217ENST00000511333 ZPR1O75312 459 aa10.85□□□□□ -0.67
MATR3-217ENST00000511333 CERKQ8TCT0 537 aa10.85□□□□□ -0.67
MATR3-217ENST00000511333 KRTAP4-6Q9BYQ5 205 aa10.85□□□□□ -0.67
MATR3-217ENST00000511333 RNF223E7ERA6 249 aa10.84□□□□□ -0.67
MATR3-217ENST00000511333 NBR1Q14596 966 aa10.83□□□□□ -0.68
MATR3-217ENST00000511333 WIPF1O43516 503 aa10.82□□□□□ -0.68
MATR3-217ENST00000511333 GDF9O60383 454 aa10.82□□□□□ -0.68
MATR3-217ENST00000511333 COPS2P61201 443 aa10.82□□□□□ -0.68
MATR3-217ENST00000511333 AAASQ9NRG9 546 aa10.82□□□□□ -0.68
MATR3-217ENST00000511333 PNMA3Q9UL41 463 aa10.82□□□□□ -0.68
MATR3-217ENST00000511333 RBM27Q9P2N5 1060 aaKnown RBP10.81□□□□□ -0.68
MATR3-217ENST00000511333 FAM187AA6NFU0 413 aa10.8□□□□□ -0.68
MATR3-217ENST00000511333 CADPS2Q86UW7 1296 aa10.79□□□□□ -0.68
MATR3-217ENST00000511333 CRIPAKQ8N1N5 446 aa10.79□□□□□ -0.68
MATR3-217ENST00000511333 ANKLE1Q8NAG6 615 aa10.79□□□□□ -0.68
MATR3-217ENST00000511333 PDIA6Q15084 440 aa10.78□□□□□ -0.68
MATR3-217ENST00000511333 ST8SIA5O15466 376 aa10.77□□□□□ -0.69
MATR3-217ENST00000511333 RNF40O75150 1001 aa10.77□□□□□ -0.69
MATR3-217ENST00000511333 WFS1O76024 890 aa10.77□□□□□ -0.69
MATR3-217ENST00000511333 HDGFP51858 240 aaKnown RBP10.76□□□□□ -0.69
MATR3-217ENST00000511333 ZNF697Q5TEC3 545 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms