RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 KIAA1468Q9P260 1216 aa4.66□□□□□ -1.66
CAST-226ENST00000509529 NCKAP5LQ9HCH0 1330 aa4.66□□□□□ -1.66
CAST-226ENST00000509529 HS6ST3Q8IZP7 471 aa4.66□□□□□ -1.66
CAST-226ENST00000509529 NRG2O14511 850 aaPredicted RBP4.65□□□□□ -1.66
CAST-226ENST00000509529 PRKD2Q9BZL6 878 aa4.65□□□□□ -1.67
CAST-226ENST00000509529 ZNF787Q6DD87 383 aa4.64□□□□□ -1.67
CAST-226ENST00000509529 ZNF775Q96BV0 537 aaPredicted RBP4.64□□□□□ -1.67
CAST-226ENST00000509529 HPS5Q9UPZ3 1129 aa4.64□□□□□ -1.67
CAST-226ENST00000509529 MAP3K9P80192 1104 aa4.63□□□□□ -1.67
CAST-226ENST00000509529 TSR3Q9UJK0 312 aaKnown RBP4.63□□□□□ -1.67
CAST-226ENST00000509529 NKX1-1Q15270 411 aaPredicted RBP4.63□□□□□ -1.67
CAST-226ENST00000509529 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.63□□□□□ -1.67
CAST-226ENST00000509529 FAM98CQ17RN3 349 aaKnown RBP4.62□□□□□ -1.67
CAST-226ENST00000509529 LRCH3Q96II8 777 aa4.62□□□□□ -1.67
CAST-226ENST00000509529 EMILIN3Q9NT22 766 aa4.62□□□□□ -1.67
CAST-226ENST00000509529 PDE4AP27815 886 aa4.61□□□□□ -1.67
CAST-226ENST00000509529 TYW1BQ6NUM6 668 aa4.61□□□□□ -1.67
CAST-226ENST00000509529 FBXW7Q969H0 707 aa4.61□□□□□ -1.67
CAST-226ENST00000509529 TJAP1Q5JTD0 557 aa4.61□□□□□ -1.67
CAST-226ENST00000509529 TRIM6-TRIM34B2RNG4 842 aa4.6□□□□□ -1.67
CAST-226ENST00000509529 ONECUT3O60422 494 aaPredicted RBP4.6□□□□□ -1.67
CAST-226ENST00000509529 PHF14O94880 888 aa4.6□□□□□ -1.67
CAST-226ENST00000509529 DDX27Q96GQ7 796 aaKnown RBP4.6□□□□□ -1.67
CAST-226ENST00000509529 CHGAP10645 457 aaKnown RBP4.6□□□□□ -1.67
CAST-226ENST00000509529 PPP1R18Q6NYC8 613 aa4.6□□□□□ -1.67
CAST-226ENST00000509529 LARP6Q9BRS8 491 aaKnown RBP4.6□□□□□ -1.67
CAST-226ENST00000509529 V9GY48 417 aaPredicted RBP4.6□□□□□ -1.67
CAST-226ENST00000509529 C6orf132Q5T0Z8 1188 aa4.59□□□□□ -1.67
CAST-226ENST00000509529 PDZRN3Q9UPQ7 1066 aa4.59□□□□□ -1.68
CAST-226ENST00000509529 MTRQ99707 1265 aa4.58□□□□□ -1.68
CAST-226ENST00000509529 MFSD10Q14728 455 aa4.57□□□□□ -1.68
CAST-226ENST00000509529 PPP4CP60510 307 aa4.57□□□□□ -1.68
CAST-226ENST00000509529 DNAJC5Q9H3Z4 198 aa4.57□□□□□ -1.68
CAST-226ENST00000509529 RYDENQ9NUL5 291 aaKnown RBP4.57□□□□□ -1.68
CAST-226ENST00000509529 ZNF516Q92618 1163 aa4.56□□□□□ -1.68
CAST-226ENST00000509529 RBM33Q96EV2 1170 aaKnown RBP4.56□□□□□ -1.68
CAST-226ENST00000509529 IL21Q9HBE4 155 aa4.56□□□□□ -1.68
CAST-226ENST00000509529 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.56□□□□□ -1.68
CAST-226ENST00000509529 TSKSQ9UJT2 592 aa4.56□□□□□ -1.68
CAST-226ENST00000509529 EPAS1Q99814 870 aa4.55□□□□□ -1.68
CAST-226ENST00000509529 SAMD7Q7Z3H4 446 aa4.54□□□□□ -1.68
CAST-226ENST00000509529 SMAPO00193 183 aa4.54□□□□□ -1.68
CAST-226ENST00000509529 NKX2-3Q8TAU0 364 aa4.54□□□□□ -1.68
CAST-226ENST00000509529 POTECB2RU33 542 aa4.53□□□□□ -1.68
CAST-226ENST00000509529 TRIM67Q6ZTA4 783 aa4.53□□□□□ -1.68
CAST-226ENST00000509529 PACS2Q86VP3 889 aa4.52□□□□□ -1.69
CAST-226ENST00000509529 TSR1Q2NL82 804 aaKnown RBP4.52□□□□□ -1.69
CAST-226ENST00000509529 DDX12PQ92771 950 aa4.52□□□□□ -1.69
CAST-226ENST00000509529 C3orf80F5H4A9 247 aa4.51□□□□□ -1.69
CAST-226ENST00000509529 APLP1P51693 650 aa4.51□□□□□ -1.69
CAST-226ENST00000509529 DPYSL4O14531 572 aa4.51□□□□□ -1.69
CAST-226ENST00000509529 GTPBP6O43824 516 aaPredicted RBP4.51□□□□□ -1.69
CAST-226ENST00000509529 MYT1Q01538 1121 aa4.51□□□□□ -1.69
CAST-226ENST00000509529 FAM198AQ9UFP1 575 aa4.51□□□□□ -1.69
CAST-226ENST00000509529 LCE2AQ5TA79 106 aaPredicted RBP4.5□□□□□ -1.69
CAST-226ENST00000509529 RNF40O75150 1001 aa4.49□□□□□ -1.69
CAST-226ENST00000509529 EN1Q05925 392 aaPredicted RBP4.49□□□□□ -1.69
CAST-226ENST00000509529 PKDCCQ504Y2 493 aa4.49□□□□□ -1.69
CAST-226ENST00000509529 MAP3K7O43318 606 aa4.49□□□□□ -1.69
CAST-226ENST00000509529 NBR1Q14596 966 aa4.49□□□□□ -1.69
CAST-226ENST00000509529 CADPS2Q86UW7 1296 aa4.49□□□□□ -1.69
CAST-226ENST00000509529 CDCA7LQ96GN5 454 aa4.49□□□□□ -1.69
CAST-226ENST00000509529 GGCXP38435 758 aa4.48□□□□□ -1.69
CAST-226ENST00000509529 COPS2P61201 443 aa4.48□□□□□ -1.69
CAST-226ENST00000509529 CAMK2BQ13554 666 aa4.48□□□□□ -1.69
CAST-226ENST00000509529 EMID1Q96A84 441 aaPredicted RBP4.48□□□□□ -1.69
CAST-226ENST00000509529 TREML4Q6UXN2 200 aa4.47□□□□□ -1.69
CAST-226ENST00000509529 PRSS12P56730 875 aa4.47□□□□□ -1.69
CAST-226ENST00000509529 PNMA3Q9UL41 463 aa4.47□□□□□ -1.69
CAST-226ENST00000509529 TATDN2Q93075 761 aa4.47□□□□□ -1.69
CAST-226ENST00000509529 TMUB1Q9BVT8 246 aa4.47□□□□□ -1.69
CAST-226ENST00000509529 DGAT1O75907 488 aa4.46□□□□□ -1.7
CAST-226ENST00000509529 NBPF26B4DH59 902 aa4.46□□□□□ -1.7
CAST-226ENST00000509529 SLC19A1P41440 591 aa4.46□□□□□ -1.7
CAST-226ENST00000509529 RNF223E7ERA6 249 aa4.45□□□□□ -1.7
CAST-226ENST00000509529 SPRYD7Q5W111 196 aa4.45□□□□□ -1.7
CAST-226ENST00000509529 FAM187AA6NFU0 413 aa4.44□□□□□ -1.7
CAST-226ENST00000509529 ST8SIA5O15466 376 aa4.44□□□□□ -1.7
CAST-226ENST00000509529 ZPR1O75312 459 aa4.44□□□□□ -1.7
CAST-226ENST00000509529 PRR20EP86478 221 aa4.44□□□□□ -1.7
CAST-226ENST00000509529 PRR20CP86479 221 aa4.44□□□□□ -1.7
CAST-226ENST00000509529 PRR20DP86480 221 aa4.44□□□□□ -1.7
CAST-226ENST00000509529 PRR20BP86481 221 aa4.44□□□□□ -1.7
CAST-226ENST00000509529 PRR20AP86496 221 aa4.44□□□□□ -1.7
CAST-226ENST00000509529 NUDT18Q6ZVK8 323 aa4.44□□□□□ -1.7
CAST-226ENST00000509529 TNFRSF10AO00220 468 aa4.44□□□□□ -1.7
CAST-226ENST00000509529 PRIM1P49642 420 aaKnown RBP4.44□□□□□ -1.7
CAST-226ENST00000509529 ZNF598Q86UK7 904 aaKnown RBP4.44□□□□□ -1.7
CAST-226ENST00000509529 HDGFP51858 240 aaKnown RBP4.42□□□□□ -1.7
CAST-226ENST00000509529 AAASQ9NRG9 546 aa4.42□□□□□ -1.7
CAST-226ENST00000509529 TLL1O43897 1013 aa4.42□□□□□ -1.7
CAST-226ENST00000509529 PDIA6Q15084 440 aa4.42□□□□□ -1.7
CAST-226ENST00000509529 SWT1Q5T5J6 900 aaKnown RBP4.42□□□□□ -1.7
CAST-226ENST00000509529 CERKQ8TCT0 537 aa4.42□□□□□ -1.7
CAST-226ENST00000509529 GDF9O60383 454 aa4.42□□□□□ -1.7
CAST-226ENST00000509529 ZNF697Q5TEC3 545 aa4.42□□□□□ -1.7
CAST-226ENST00000509529 IGSF5Q9NSI5 407 aa4.42□□□□□ -1.7
CAST-226ENST00000509529 LIAT1Q6ZQX7 453 aa4.41□□□□□ -1.7
CAST-226ENST00000509529 CDHR5Q9HBB8 845 aa4.41□□□□□ -1.7
CAST-226ENST00000509529 PPEF1O14829 653 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms