RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 LRCH3Q96II8 777 aa8.01□□□□□ -1.13
HMGB3P17-201ENST00000504195 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.01□□□□□ -1.13
HMGB3P17-201ENST00000504195 PPP1R15BQ5SWA1 713 aa8□□□□□ -1.13
HMGB3P17-201ENST00000504195 ANO8Q9HCE9 1232 aaPredicted RBP8□□□□□ -1.13
HMGB3P17-201ENST00000504195 KIAA1468Q9P260 1216 aa7.99□□□□□ -1.13
HMGB3P17-201ENST00000504195 SEPT9Q9UHD8 586 aaPredicted RBP7.99□□□□□ -1.13
HMGB3P17-201ENST00000504195 COL9A1P20849 921 aa7.97□□□□□ -1.13
HMGB3P17-201ENST00000504195 FAM98CQ17RN3 349 aaKnown RBP7.96□□□□□ -1.14
HMGB3P17-201ENST00000504195 PPP1R18Q6NYC8 613 aa7.95□□□□□ -1.14
HMGB3P17-201ENST00000504195 ONECUT3O60422 494 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P17-201ENST00000504195 FBXW7Q969H0 707 aa7.94□□□□□ -1.14
HMGB3P17-201ENST00000504195 RGL2O15211 777 aa7.93□□□□□ -1.14
HMGB3P17-201ENST00000504195 PPP4CP60510 307 aa7.93□□□□□ -1.14
HMGB3P17-201ENST00000504195 MAP3K9P80192 1104 aa7.93□□□□□ -1.14
HMGB3P17-201ENST00000504195 TYW1BQ6NUM6 668 aa7.92□□□□□ -1.14
HMGB3P17-201ENST00000504195 PCDHGA10Q9Y5H3 936 aa7.92□□□□□ -1.14
HMGB3P17-201ENST00000504195 PKDCCQ504Y2 493 aa7.91□□□□□ -1.14
HMGB3P17-201ENST00000504195 CRISPLD2Q9H0B8 497 aa7.91□□□□□ -1.14
HMGB3P17-201ENST00000504195 IL21Q9HBE4 155 aa7.91□□□□□ -1.14
HMGB3P17-201ENST00000504195 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.91□□□□□ -1.14
HMGB3P17-201ENST00000504195 TJAP1Q5JTD0 557 aa7.9□□□□□ -1.14
HMGB3P17-201ENST00000504195 TRIM6-TRIM34B2RNG4 842 aa7.89□□□□□ -1.15
HMGB3P17-201ENST00000504195 GGCXP38435 758 aa7.89□□□□□ -1.15
HMGB3P17-201ENST00000504195 MTRQ99707 1265 aa7.89□□□□□ -1.15
HMGB3P17-201ENST00000504195 PHF14O94880 888 aa7.87□□□□□ -1.15
HMGB3P17-201ENST00000504195 PDE4AP27815 886 aa7.87□□□□□ -1.15
HMGB3P17-201ENST00000504195 TREML4Q6UXN2 200 aa7.86□□□□□ -1.15
HMGB3P17-201ENST00000504195 RYDENQ9NUL5 291 aaKnown RBP7.83□□□□□ -1.16
HMGB3P17-201ENST00000504195 DGAT1O75907 488 aa7.82□□□□□ -1.16
HMGB3P17-201ENST00000504195 MYT1Q01538 1121 aa7.82□□□□□ -1.16
HMGB3P17-201ENST00000504195 C6orf132Q5T0Z8 1188 aa7.82□□□□□ -1.16
HMGB3P17-201ENST00000504195 PACS2Q86VP3 889 aa7.82□□□□□ -1.16
HMGB3P17-201ENST00000504195 DDX27Q96GQ7 796 aaKnown RBP7.82□□□□□ -1.16
HMGB3P17-201ENST00000504195 STK17AQ9UEE5 414 aa7.82□□□□□ -1.16
HMGB3P17-201ENST00000504195 POTECB2RU33 542 aa7.8□□□□□ -1.16
HMGB3P17-201ENST00000504195 HS6ST3Q8IZP7 471 aa7.8□□□□□ -1.16
HMGB3P17-201ENST00000504195 EPAS1Q99814 870 aa7.8□□□□□ -1.16
HMGB3P17-201ENST00000504195 NCKAP5LQ9HCH0 1330 aa7.79□□□□□ -1.16
HMGB3P17-201ENST00000504195 SAMD7Q7Z3H4 446 aa7.79□□□□□ -1.16
HMGB3P17-201ENST00000504195 ZNF516Q92618 1163 aa7.79□□□□□ -1.16
HMGB3P17-201ENST00000504195 RNF40O75150 1001 aa7.78□□□□□ -1.16
HMGB3P17-201ENST00000504195 LARP6Q9BRS8 491 aaKnown RBP7.78□□□□□ -1.16
HMGB3P17-201ENST00000504195 FAM187AA6NFU0 413 aa7.77□□□□□ -1.17
HMGB3P17-201ENST00000504195 TMUB1Q9BVT8 246 aa7.77□□□□□ -1.17
HMGB3P17-201ENST00000504195 INSM1Q01101 510 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P17-201ENST00000504195 PKD2Q13563 968 aa7.76□□□□□ -1.17
HMGB3P17-201ENST00000504195 RBM33Q96EV2 1170 aaKnown RBP7.76□□□□□ -1.17
HMGB3P17-201ENST00000504195 LCE2AQ5TA79 106 aaPredicted RBP7.75□□□□□ -1.17
HMGB3P17-201ENST00000504195 TRIM67Q6ZTA4 783 aa7.75□□□□□ -1.17
HMGB3P17-201ENST00000504195 NKX2-3Q8TAU0 364 aa7.75□□□□□ -1.17
HMGB3P17-201ENST00000504195 WFS1O76024 890 aa7.74□□□□□ -1.17
HMGB3P17-201ENST00000504195 SLC19A1P41440 591 aa7.74□□□□□ -1.17
HMGB3P17-201ENST00000504195 HDGFP51858 240 aaKnown RBP7.74□□□□□ -1.17
HMGB3P17-201ENST00000504195 PRR20EP86478 221 aa7.73□□□□□ -1.17
HMGB3P17-201ENST00000504195 PRR20CP86479 221 aa7.73□□□□□ -1.17
HMGB3P17-201ENST00000504195 PRR20DP86480 221 aa7.73□□□□□ -1.17
HMGB3P17-201ENST00000504195 PRR20BP86481 221 aa7.73□□□□□ -1.17
HMGB3P17-201ENST00000504195 PRR20AP86496 221 aa7.73□□□□□ -1.17
HMGB3P17-201ENST00000504195 NECTIN2Q92692 538 aa7.73□□□□□ -1.17
HMGB3P17-201ENST00000504195 EMILIN3Q9NT22 766 aa7.73□□□□□ -1.17
HMGB3P17-201ENST00000504195 TSKSQ9UJT2 592 aa7.73□□□□□ -1.17
HMGB3P17-201ENST00000504195 COPS2P61201 443 aa7.71□□□□□ -1.18
HMGB3P17-201ENST00000504195 SMAPO00193 183 aa7.7□□□□□ -1.18
HMGB3P17-201ENST00000504195 CHGAP10645 457 aaKnown RBP7.7□□□□□ -1.18
HMGB3P17-201ENST00000504195 APLP1P51693 650 aa7.7□□□□□ -1.18
HMGB3P17-201ENST00000504195 ZNF598Q86UK7 904 aaKnown RBP7.7□□□□□ -1.18
HMGB3P17-201ENST00000504195 LOC100996750A0A140TA64 210 aa7.69□□□□□ -1.18
HMGB3P17-201ENST00000504195 NBPF26B4DH59 902 aa7.69□□□□□ -1.18
HMGB3P17-201ENST00000504195 ST8SIA5O15466 376 aa7.69□□□□□ -1.18
HMGB3P17-201ENST00000504195 MFSD10Q14728 455 aa7.69□□□□□ -1.18
HMGB3P17-201ENST00000504195 SPRYD7Q5W111 196 aa7.69□□□□□ -1.18
HMGB3P17-201ENST00000504195 KRTAP4-6Q9BYQ5 205 aa7.69□□□□□ -1.18
HMGB3P17-201ENST00000504195 MAP3K7O43318 606 aa7.68□□□□□ -1.18
HMGB3P17-201ENST00000504195 TNFRSF10AO00220 468 aa7.67□□□□□ -1.18
HMGB3P17-201ENST00000504195 ZNF697Q5TEC3 545 aa7.67□□□□□ -1.18
HMGB3P17-201ENST00000504195 AAASQ9NRG9 546 aa7.67□□□□□ -1.18
HMGB3P17-201ENST00000504195 WIPF1O43516 503 aa7.66□□□□□ -1.18
HMGB3P17-201ENST00000504195 PNMA3Q9UL41 463 aa7.66□□□□□ -1.18
HMGB3P17-201ENST00000504195 RNF223E7ERA6 249 aa7.65□□□□□ -1.18
HMGB3P17-201ENST00000504195 ZPR1O75312 459 aa7.65□□□□□ -1.18
HMGB3P17-201ENST00000504195 DDX12PQ92771 950 aa7.65□□□□□ -1.18
HMGB3P17-201ENST00000504195 CDCA7LQ96GN5 454 aa7.65□□□□□ -1.18
HMGB3P17-201ENST00000504195 SLC4A3P48751 1232 aa7.64□□□□□ -1.19
HMGB3P17-201ENST00000504195 EN1Q05925 392 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P17-201ENST00000504195 NBR1Q14596 966 aa7.64□□□□□ -1.19
HMGB3P17-201ENST00000504195 FAM181BA6NEQ2 426 aa7.63□□□□□ -1.19
HMGB3P17-201ENST00000504195 NKX1-1Q15270 411 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P17-201ENST00000504195 TSR1Q2NL82 804 aaKnown RBP7.63□□□□□ -1.19
HMGB3P17-201ENST00000504195 TATDN2Q93075 761 aa7.63□□□□□ -1.19
HMGB3P17-201ENST00000504195 C11orf95C9JLR9 678 aaPredicted RBP7.62□□□□□ -1.19
HMGB3P17-201ENST00000504195 PRSS12P56730 875 aa7.62□□□□□ -1.19
HMGB3P17-201ENST00000504195 ANKLE1Q8NAG6 615 aa7.62□□□□□ -1.19
HMGB3P17-201ENST00000504195 DNAJC5Q9H3Z4 198 aa7.62□□□□□ -1.19
HMGB3P17-201ENST00000504195 DPYSL4O14531 572 aa7.61□□□□□ -1.19
HMGB3P17-201ENST00000504195 SLF2Q8IX21 1173 aa7.61□□□□□ -1.19
HMGB3P17-201ENST00000504195 CERKQ8TCT0 537 aa7.61□□□□□ -1.19
HMGB3P17-201ENST00000504195 PRR14Q9BWN1 585 aa7.61□□□□□ -1.19
HMGB3P17-201ENST00000504195 GDF9O60383 454 aa7.6□□□□□ -1.19
HMGB3P17-201ENST00000504195 NFX1Q12986 1120 aaKnown RBP7.6□□□□□ -1.19
HMGB3P17-201ENST00000504195 EMID1Q96A84 441 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms