RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 FAM163AQ96GL9 167 aaPredicted RBP8.33□□□□□ -1.08
SPTLC3-205ENST00000476791 PLCD4Q9BRC7 762 aa8.33□□□□□ -1.08
SPTLC3-205ENST00000476791 DNAJC5Q9H3Z4 198 aa8.33□□□□□ -1.08
SPTLC3-205ENST00000476791 TSHZ2Q9NRE2 1034 aa8.32□□□□□ -1.08
SPTLC3-205ENST00000476791 MTMR7Q9Y216 660 aa8.31□□□□□ -1.08
SPTLC3-205ENST00000476791 TMEM92Q6UXU6 159 aa8.3□□□□□ -1.08
SPTLC3-205ENST00000476791 GRIPAP1Q4V328 841 aa8.3□□□□□ -1.08
SPTLC3-205ENST00000476791 RBM25P49756 843 aaKnown RBP8.29□□□□□ -1.08
SPTLC3-205ENST00000476791 RGS22Q8NE09 1264 aa8.29□□□□□ -1.08
SPTLC3-205ENST00000476791 RAD21O60216 631 aa8.29□□□□□ -1.08
SPTLC3-205ENST00000476791 CC2D2BQ6DHV5 1058 aa8.28□□□□□ -1.08
SPTLC3-205ENST00000476791 ARID4BQ4LE39 1312 aaPredicted RBP8.27□□□□□ -1.08
SPTLC3-205ENST00000476791 ARID3CA6NKF2 412 aa8.27□□□□□ -1.09
SPTLC3-205ENST00000476791 GTPBP6O43824 516 aaPredicted RBP8.27□□□□□ -1.09
SPTLC3-205ENST00000476791 KDM4AO75164 1064 aa8.27□□□□□ -1.09
SPTLC3-205ENST00000476791 NBR1Q14596 966 aa8.27□□□□□ -1.09
SPTLC3-205ENST00000476791 IL27Q8NEV9 243 aa8.27□□□□□ -1.09
SPTLC3-205ENST00000476791 KCTD17Q8N5Z5 321 aa8.26□□□□□ -1.09
SPTLC3-205ENST00000476791 LCE2DQ5TA82 110 aaPredicted RBP8.26□□□□□ -1.09
SPTLC3-205ENST00000476791 RYDENQ9NUL5 291 aaKnown RBP8.26□□□□□ -1.09
SPTLC3-205ENST00000476791 USP35Q9P2H5 1018 aa8.26□□□□□ -1.09
SPTLC3-205ENST00000476791 PPM1GO15355 546 aaPredicted RBP8.25□□□□□ -1.09
SPTLC3-205ENST00000476791 CCDC27Q2M243 656 aa8.25□□□□□ -1.09
SPTLC3-205ENST00000476791 STAC3Q96MF2 364 aa8.25□□□□□ -1.09
SPTLC3-205ENST00000476791 SNPHO15079 494 aa8.24□□□□□ -1.09
SPTLC3-205ENST00000476791 ST18O60284 1047 aa8.23□□□□□ -1.09
SPTLC3-205ENST00000476791 C2orf72A6NCS6 295 aa8.22□□□□□ -1.09
SPTLC3-205ENST00000476791 BRPF1P55201 1214 aaPredicted RBP8.22□□□□□ -1.09
SPTLC3-205ENST00000476791 OS9Q13438 667 aaPredicted RBP8.22□□□□□ -1.09
SPTLC3-205ENST00000476791 ANAPC15P60006 121 aa8.22□□□□□ -1.09
SPTLC3-205ENST00000476791 TMC2Q8TDI7 906 aa8.21□□□□□ -1.1
SPTLC3-205ENST00000476791 POTEMA6NI47 508 aa8.2□□□□□ -1.1
SPTLC3-205ENST00000476791 PATL2C9JE40 543 aaKnown RBP8.2□□□□□ -1.1
SPTLC3-205ENST00000476791 HOXB3P14651 431 aaPredicted RBP8.2□□□□□ -1.1
SPTLC3-205ENST00000476791 FAM193AP78312 1265 aa8.2□□□□□ -1.1
SPTLC3-205ENST00000476791 POTEGQ6S5H5 508 aa8.2□□□□□ -1.1
SPTLC3-205ENST00000476791 KIF3CO14782 793 aa8.19□□□□□ -1.1
SPTLC3-205ENST00000476791 CANXP27824 592 aaKnown RBP8.19□□□□□ -1.1
SPTLC3-205ENST00000476791 ZNF710Q8N1W2 664 aa8.18□□□□□ -1.1
SPTLC3-205ENST00000476791 MARVELD3Q96A59 401 aa8.18□□□□□ -1.1
SPTLC3-205ENST00000476791 FAM50AQ14320 339 aaKnown RBP8.17□□□□□ -1.1
SPTLC3-205ENST00000476791 MCCP23508 829 aa8.17□□□□□ -1.1
SPTLC3-205ENST00000476791 DOK7Q18PE1 504 aa8.17□□□□□ -1.1
SPTLC3-205ENST00000476791 PTMSP20962 102 aa8.16□□□□□ -1.1
SPTLC3-205ENST00000476791 FAM9BQ8IZU0 186 aa8.16□□□□□ -1.1
SPTLC3-205ENST00000476791 GPATCH11Q8N954 259 aa8.16□□□□□ -1.1
SPTLC3-205ENST00000476791 SPRYD3Q8NCJ5 442 aa8.15□□□□□ -1.1
SPTLC3-205ENST00000476791 DNAJC2Q99543 621 aaKnown RBP8.15□□□□□ -1.1
SPTLC3-205ENST00000476791 RIMBP2O15034 1052 aa8.13□□□□□ -1.11
SPTLC3-205ENST00000476791 CDCA8Q53HL2 280 aa8.13□□□□□ -1.11
SPTLC3-205ENST00000476791 SGSM3Q96HU1 749 aa8.13□□□□□ -1.11
SPTLC3-205ENST00000476791 GPHNQ9NQX3 736 aaPredicted RBP8.13□□□□□ -1.11
SPTLC3-205ENST00000476791 MAFGO15525 162 aa8.13□□□□□ -1.11
SPTLC3-205ENST00000476791 SETQ01105 290 aaPredicted RBP8.13□□□□□ -1.11
SPTLC3-205ENST00000476791 PTMAP06454 111 aaKnown RBP8.12□□□□□ -1.11
SPTLC3-205ENST00000476791 EMP3P54852 163 aa8.12□□□□□ -1.11
SPTLC3-205ENST00000476791 DSG2Q14126 1118 aa8.12□□□□□ -1.11
SPTLC3-205ENST00000476791 CADPS2Q86UW7 1296 aa8.12□□□□□ -1.11
SPTLC3-205ENST00000476791 ZNF830Q96NB3 372 aaPredicted RBP8.12□□□□□ -1.11
SPTLC3-205ENST00000476791 NCKAP5LQ9HCH0 1330 aa8.11□□□□□ -1.11
SPTLC3-205ENST00000476791 PRDM4Q9UKN5 801 aa8.11□□□□□ -1.11
SPTLC3-205ENST00000476791 FOXK1P85037 733 aa8.1□□□□□ -1.11
SPTLC3-205ENST00000476791 CNGB1Q14028 1251 aaPredicted RBP8.1□□□□□ -1.11
SPTLC3-205ENST00000476791 PLPP6Q8IY26 295 aa8.1□□□□□ -1.11
SPTLC3-205ENST00000476791 CRISPLD2Q9H0B8 497 aa8.1□□□□□ -1.11
SPTLC3-205ENST00000476791 SLC52A1Q9NWF4 448 aa8.1□□□□□ -1.11
SPTLC3-205ENST00000476791 TMTC2Q8N394 836 aa8.1□□□□□ -1.11
SPTLC3-205ENST00000476791 HOXB1P14653 301 aaPredicted RBP8.09□□□□□ -1.11
SPTLC3-205ENST00000476791 ARSIQ5FYB1 569 aa8.09□□□□□ -1.11
SPTLC3-205ENST00000476791 KHSRPQ92945 711 aaKnown RBP eCLIP8.09□□□□□ -1.11
SPTLC3-205ENST00000476791 PDE4AP27815 886 aa8.09□□□□□ -1.11
SPTLC3-205ENST00000476791 FOXD4L6Q3SYB3 417 aaPredicted RBP8.09□□□□□ -1.11
SPTLC3-205ENST00000476791 FOXD4L3Q6VB84 417 aaPredicted RBP8.09□□□□□ -1.11
SPTLC3-205ENST00000476791 LARP6Q9BRS8 491 aaKnown RBP8.09□□□□□ -1.11
SPTLC3-205ENST00000476791 PLEKHD1A6NEE1 506 aa8.08□□□□□ -1.12
SPTLC3-205ENST00000476791 GPR153Q6NV75 609 aa8.08□□□□□ -1.12
SPTLC3-205ENST00000476791 LAS1LQ9Y4W2 734 aaKnown RBP8.08□□□□□ -1.12
SPTLC3-205ENST00000476791 FAM205CA6NFA0 338 aa8.08□□□□□ -1.12
SPTLC3-205ENST00000476791 CADPSQ9ULU8 1353 aa8.07□□□□□ -1.12
SPTLC3-205ENST00000476791 PPP1R15BQ5SWA1 713 aa8.07□□□□□ -1.12
SPTLC3-205ENST00000476791 ZSWIM6Q9HCJ5 1215 aa8.07□□□□□ -1.12
SPTLC3-205ENST00000476791 NISCHQ9Y2I1 1504 aa8.07□□□□□ -1.12
SPTLC3-205ENST00000476791 NEFMP07197 916 aa8.06□□□□□ -1.12
SPTLC3-205ENST00000476791 LOC102724159A0A0B4J2E5 919 aa8.06□□□□□ -1.12
SPTLC3-205ENST00000476791 BRD1O95696 1058 aa8.06□□□□□ -1.12
SPTLC3-205ENST00000476791 PWP2Q15269 919 aaKnown RBP8.06□□□□□ -1.12
SPTLC3-205ENST00000476791 ZNF316A6NFI3 1004 aaPredicted RBP8.05□□□□□ -1.12
SPTLC3-205ENST00000476791 RTL5Q5HYW3 569 aaPredicted RBP8.05□□□□□ -1.12
SPTLC3-205ENST00000476791 DDX27Q96GQ7 796 aaKnown RBP8.05□□□□□ -1.12
SPTLC3-205ENST00000476791 AEBP1Q8IUX7 1158 aa8.05□□□□□ -1.12
SPTLC3-205ENST00000476791 PCDHGA4Q9Y5G9 962 aa8.05□□□□□ -1.12
SPTLC3-205ENST00000476791 APBB1O00213 710 aa8.04□□□□□ -1.12
SPTLC3-205ENST00000476791 SLC34A2O95436 690 aa8.04□□□□□ -1.12
SPTLC3-205ENST00000476791 NUDT7P0C024 238 aa8.04□□□□□ -1.12
SPTLC3-205ENST00000476791 HS3ST6Q96QI5 342 aa8.04□□□□□ -1.12
SPTLC3-205ENST00000476791 POTEB3A0JP26 581 aa8.04□□□□□ -1.12
SPTLC3-205ENST00000476791 RGS3P49796 1198 aa8.04□□□□□ -1.12
SPTLC3-205ENST00000476791 POTEBQ6S5H4 581 aa8.04□□□□□ -1.12
SPTLC3-205ENST00000476791 CDAN1Q8IWY9 1227 aa8.04□□□□□ -1.12
SPTLC3-205ENST00000476791 ERBB3P21860 1342 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms