RNA–Protein interactions for RNA: ENST00000474557.1

HMGN1P10-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 10, humanhuman

BASIC

Gene HMGN1P10, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P10-201ENST00000474557 FBXW7Q969H0 707 aa10.58□□□□□ -0.72
HMGN1P10-201ENST00000474557 CRISPLD2Q9H0B8 497 aa10.58□□□□□ -0.72
HMGN1P10-201ENST00000474557 TSR3Q9UJK0 312 aaKnown RBP10.58□□□□□ -0.72
HMGN1P10-201ENST00000474557 ONECUT3O60422 494 aaPredicted RBP10.57□□□□□ -0.72
HMGN1P10-201ENST00000474557 KIAA1468Q9P260 1216 aa10.57□□□□□ -0.72
HMGN1P10-201ENST00000474557 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.56□□□□□ -0.72
HMGN1P10-201ENST00000474557 PKD2Q13563 968 aa10.55□□□□□ -0.72
HMGN1P10-201ENST00000474557 HS6ST3Q8IZP7 471 aa10.55□□□□□ -0.72
HMGN1P10-201ENST00000474557 LRCH3Q96II8 777 aa10.55□□□□□ -0.72
HMGN1P10-201ENST00000474557 PRKD2Q9BZL6 878 aa10.55□□□□□ -0.72
HMGN1P10-201ENST00000474557 COL9A1P20849 921 aa10.53□□□□□ -0.72
HMGN1P10-201ENST00000474557 HPS5Q9UPZ3 1129 aa10.53□□□□□ -0.72
HMGN1P10-201ENST00000474557 FAM98CQ17RN3 349 aaKnown RBP10.52□□□□□ -0.73
HMGN1P10-201ENST00000474557 TYW1BQ6NUM6 668 aa10.52□□□□□ -0.73
HMGN1P10-201ENST00000474557 V9GY48 417 aaPredicted RBP10.52□□□□□ -0.73
HMGN1P10-201ENST00000474557 PCDHGA10Q9Y5H3 936 aa10.51□□□□□ -0.73
HMGN1P10-201ENST00000474557 SEPT9Q9UHD8 586 aaPredicted RBP10.49□□□□□ -0.73
HMGN1P10-201ENST00000474557 PHF14O94880 888 aa10.48□□□□□ -0.73
HMGN1P10-201ENST00000474557 PPP4CP60510 307 aa10.47□□□□□ -0.73
HMGN1P10-201ENST00000474557 ZNF775Q96BV0 537 aaPredicted RBP10.46□□□□□ -0.73
HMGN1P10-201ENST00000474557 DDX27Q96GQ7 796 aaKnown RBP10.46□□□□□ -0.73
HMGN1P10-201ENST00000474557 TRIM6-TRIM34B2RNG4 842 aa10.45□□□□□ -0.74
HMGN1P10-201ENST00000474557 PDZRN3Q9UPQ7 1066 aa10.45□□□□□ -0.74
HMGN1P10-201ENST00000474557 NCKAP5LQ9HCH0 1330 aa10.43□□□□□ -0.74
HMGN1P10-201ENST00000474557 LARP6Q9BRS8 491 aaKnown RBP10.43□□□□□ -0.74
HMGN1P10-201ENST00000474557 CHGAP10645 457 aaKnown RBP10.42□□□□□ -0.74
HMGN1P10-201ENST00000474557 C6orf132Q5T0Z8 1188 aa10.42□□□□□ -0.74
HMGN1P10-201ENST00000474557 EPAS1Q99814 870 aa10.42□□□□□ -0.74
HMGN1P10-201ENST00000474557 PPP1R18Q6NYC8 613 aa10.41□□□□□ -0.74
HMGN1P10-201ENST00000474557 IL21Q9HBE4 155 aa10.41□□□□□ -0.74
HMGN1P10-201ENST00000474557 TJAP1Q5JTD0 557 aa10.4□□□□□ -0.74
HMGN1P10-201ENST00000474557 PACS2Q86VP3 889 aa10.39□□□□□ -0.75
HMGN1P10-201ENST00000474557 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.39□□□□□ -0.75
HMGN1P10-201ENST00000474557 GGCXP38435 758 aa10.38□□□□□ -0.75
HMGN1P10-201ENST00000474557 DNAJC5Q9H3Z4 198 aa10.35□□□□□ -0.75
HMGN1P10-201ENST00000474557 MTRQ99707 1265 aa10.34□□□□□ -0.75
HMGN1P10-201ENST00000474557 MFSD10Q14728 455 aa10.32□□□□□ -0.76
HMGN1P10-201ENST00000474557 EMILIN3Q9NT22 766 aa10.32□□□□□ -0.76
HMGN1P10-201ENST00000474557 NKX1-1Q15270 411 aaPredicted RBP10.3□□□□□ -0.76
HMGN1P10-201ENST00000474557 HDGFP51858 240 aaKnown RBP10.29□□□□□ -0.76
HMGN1P10-201ENST00000474557 PKDCCQ504Y2 493 aa10.29□□□□□ -0.76
HMGN1P10-201ENST00000474557 RBM33Q96EV2 1170 aaKnown RBP10.29□□□□□ -0.76
HMGN1P10-201ENST00000474557 SAMD7Q7Z3H4 446 aa10.28□□□□□ -0.76
HMGN1P10-201ENST00000474557 NECTIN2Q92692 538 aa10.27□□□□□ -0.77
HMGN1P10-201ENST00000474557 TMUB1Q9BVT8 246 aa10.27□□□□□ -0.77
HMGN1P10-201ENST00000474557 DGAT1O75907 488 aa10.24□□□□□ -0.77
HMGN1P10-201ENST00000474557 ZNF516Q92618 1163 aa10.24□□□□□ -0.77
HMGN1P10-201ENST00000474557 TSKSQ9UJT2 592 aa10.24□□□□□ -0.77
HMGN1P10-201ENST00000474557 RNF40O75150 1001 aa10.22□□□□□ -0.77
HMGN1P10-201ENST00000474557 MAP3K7O43318 606 aa10.21□□□□□ -0.77
HMGN1P10-201ENST00000474557 NBPF26B4DH59 902 aa10.2□□□□□ -0.78
HMGN1P10-201ENST00000474557 MYT1Q01538 1121 aa10.19□□□□□ -0.78
HMGN1P10-201ENST00000474557 TREML4Q6UXN2 200 aa10.19□□□□□ -0.78
HMGN1P10-201ENST00000474557 CERKQ8TCT0 537 aa10.19□□□□□ -0.78
HMGN1P10-201ENST00000474557 DDX12PQ92771 950 aa10.19□□□□□ -0.78
HMGN1P10-201ENST00000474557 EN1Q05925 392 aaPredicted RBP10.18□□□□□ -0.78
HMGN1P10-201ENST00000474557 SMAPO00193 183 aa10.17□□□□□ -0.78
HMGN1P10-201ENST00000474557 SLC19A1P41440 591 aa10.17□□□□□ -0.78
HMGN1P10-201ENST00000474557 NKX2-3Q8TAU0 364 aa10.17□□□□□ -0.78
HMGN1P10-201ENST00000474557 CDCA7LQ96GN5 454 aa10.17□□□□□ -0.78
HMGN1P10-201ENST00000474557 DPYSL4O14531 572 aa10.16□□□□□ -0.78
HMGN1P10-201ENST00000474557 SLC4A3P48751 1232 aa10.16□□□□□ -0.78
HMGN1P10-201ENST00000474557 PRSS12P56730 875 aa10.16□□□□□ -0.78
HMGN1P10-201ENST00000474557 NBR1Q14596 966 aa10.16□□□□□ -0.78
HMGN1P10-201ENST00000474557 APLP1P51693 650 aa10.15□□□□□ -0.78
HMGN1P10-201ENST00000474557 TATDN2Q93075 761 aa10.15□□□□□ -0.78
HMGN1P10-201ENST00000474557 PNMA3Q9UL41 463 aa10.15□□□□□ -0.78
HMGN1P10-201ENST00000474557 COPS2P61201 443 aa10.14□□□□□ -0.79
HMGN1P10-201ENST00000474557 PRR20EP86478 221 aa10.13□□□□□ -0.79
HMGN1P10-201ENST00000474557 PRR20CP86479 221 aa10.13□□□□□ -0.79
HMGN1P10-201ENST00000474557 PRR20DP86480 221 aa10.13□□□□□ -0.79
HMGN1P10-201ENST00000474557 PRR20BP86481 221 aa10.13□□□□□ -0.79
HMGN1P10-201ENST00000474557 PRR20AP86496 221 aa10.13□□□□□ -0.79
HMGN1P10-201ENST00000474557 TSR1Q2NL82 804 aaKnown RBP10.13□□□□□ -0.79
HMGN1P10-201ENST00000474557 POTECB2RU33 542 aa10.12□□□□□ -0.79
HMGN1P10-201ENST00000474557 GTPBP6O43824 516 aaPredicted RBP10.12□□□□□ -0.79
HMGN1P10-201ENST00000474557 CAMK2BQ13554 666 aa10.12□□□□□ -0.79
HMGN1P10-201ENST00000474557 TRIM67Q6ZTA4 783 aa10.12□□□□□ -0.79
HMGN1P10-201ENST00000474557 ZNF598Q86UK7 904 aaKnown RBP10.11□□□□□ -0.79
HMGN1P10-201ENST00000474557 SLF2Q8IX21 1173 aa10.11□□□□□ -0.79
HMGN1P10-201ENST00000474557 PRR14Q9BWN1 585 aa10.11□□□□□ -0.79
HMGN1P10-201ENST00000474557 STK17AQ9UEE5 414 aa10.11□□□□□ -0.79
HMGN1P10-201ENST00000474557 FAM187AA6NFU0 413 aa10.1□□□□□ -0.79
HMGN1P10-201ENST00000474557 ZPR1O75312 459 aa10.1□□□□□ -0.79
HMGN1P10-201ENST00000474557 SPRYD7Q5W111 196 aa10.09□□□□□ -0.79
HMGN1P10-201ENST00000474557 RNF223E7ERA6 249 aa10.06□□□□□ -0.8
HMGN1P10-201ENST00000474557 ZNF697Q5TEC3 545 aa10.05□□□□□ -0.8
HMGN1P10-201ENST00000474557 NUDT18Q6ZVK8 323 aa10.05□□□□□ -0.8
HMGN1P10-201ENST00000474557 WFS1O76024 890 aa10.04□□□□□ -0.8
HMGN1P10-201ENST00000474557 INSM1Q01101 510 aaPredicted RBP10.04□□□□□ -0.8
HMGN1P10-201ENST00000474557 LCE2AQ5TA79 106 aaPredicted RBP10.04□□□□□ -0.8
HMGN1P10-201ENST00000474557 FAM198AQ9UFP1 575 aa10.04□□□□□ -0.8
HMGN1P10-201ENST00000474557 ANKLE1Q8NAG6 615 aa10.03□□□□□ -0.8
HMGN1P10-201ENST00000474557 PCDHB3Q9Y5E6 796 aa10.03□□□□□ -0.8
HMGN1P10-201ENST00000474557 SPDYE16A6NNV3 312 aaPredicted RBP10.02□□□□□ -0.81
HMGN1P10-201ENST00000474557 RBM27Q9P2N5 1060 aaKnown RBP10.01□□□□□ -0.81
HMGN1P10-201ENST00000474557 TNFRSF10AO00220 468 aa10□□□□□ -0.81
HMGN1P10-201ENST00000474557 PDIA6Q15084 440 aa10□□□□□ -0.81
HMGN1P10-201ENST00000474557 AAASQ9NRG9 546 aa10□□□□□ -0.81
HMGN1P10-201ENST00000474557 SWT1Q5T5J6 900 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms