RNA–Protein interactions for RNA: ENST00000440664.5

LINC01549-201, Transcript of long intergenic non-protein coding RNA 1549, humanhuman

TSL 3 BASIC

Gene LINC01549, Length 714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549-201ENST00000440664 HPS5Q9UPZ3 1129 aa8.57□□□□□ -1.04
LINC01549-201ENST00000440664 WFS1O76024 890 aa8.56□□□□□ -1.04
LINC01549-201ENST00000440664 JPH4Q96JJ6 628 aa8.55□□□□□ -1.04
LINC01549-201ENST00000440664 PPP1R3GB7ZBB8 358 aa8.54□□□□□ -1.04
LINC01549-201ENST00000440664 OXER1Q8TDS5 423 aa8.54□□□□□ -1.04
LINC01549-201ENST00000440664 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.54□□□□□ -1.04
LINC01549-201ENST00000440664 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.54□□□□□ -1.04
LINC01549-201ENST00000440664 TAOK2Q9UL54 1235 aa8.54□□□□□ -1.04
LINC01549-201ENST00000440664 GPHNQ9NQX3 736 aaPredicted RBP8.53□□□□□ -1.04
LINC01549-201ENST00000440664 DGAT1O75907 488 aa8.52□□□□□ -1.05
LINC01549-201ENST00000440664 LRCH3Q96II8 777 aa8.52□□□□□ -1.05
LINC01549-201ENST00000440664 SEPT9Q9UHD8 586 aaPredicted RBP8.52□□□□□ -1.05
LINC01549-201ENST00000440664 STK25O00506 426 aa8.51□□□□□ -1.05
LINC01549-201ENST00000440664 SUZ12Q15022 739 aaKnown RBP8.51□□□□□ -1.05
LINC01549-201ENST00000440664 TJAP1Q5JTD0 557 aa8.51□□□□□ -1.05
LINC01549-201ENST00000440664 PPP1R37O75864 691 aa8.5□□□□□ -1.05
LINC01549-201ENST00000440664 KIAA1468Q9P260 1216 aa8.5□□□□□ -1.05
LINC01549-201ENST00000440664 WIPF1O43516 503 aa8.48□□□□□ -1.05
LINC01549-201ENST00000440664 COL9A1P20849 921 aa8.46□□□□□ -1.06
LINC01549-201ENST00000440664 TRIM67Q6ZTA4 783 aa8.46□□□□□ -1.06
LINC01549-201ENST00000440664 IL21Q9HBE4 155 aa8.46□□□□□ -1.06
LINC01549-201ENST00000440664 PPP4CP60510 307 aa8.45□□□□□ -1.06
LINC01549-201ENST00000440664 MTRQ99707 1265 aa8.45□□□□□ -1.06
LINC01549-201ENST00000440664 FAM187AA6NFU0 413 aa8.44□□□□□ -1.06
LINC01549-201ENST00000440664 FAM98CQ17RN3 349 aaKnown RBP8.44□□□□□ -1.06
LINC01549-201ENST00000440664 ST8SIA5O15466 376 aa8.43□□□□□ -1.06
LINC01549-201ENST00000440664 GGCXP38435 758 aa8.43□□□□□ -1.06
LINC01549-201ENST00000440664 ANO8Q9HCE9 1232 aaPredicted RBP8.41□□□□□ -1.06
LINC01549-201ENST00000440664 FAM181BA6NEQ2 426 aa8.4□□□□□ -1.06
LINC01549-201ENST00000440664 EVI5O60447 810 aa8.4□□□□□ -1.06
LINC01549-201ENST00000440664 NFX1Q12986 1120 aaKnown RBP8.4□□□□□ -1.06
LINC01549-201ENST00000440664 ZNF516Q92618 1163 aa8.39□□□□□ -1.07
LINC01549-201ENST00000440664 AAASQ9NRG9 546 aa8.38□□□□□ -1.07
LINC01549-201ENST00000440664 ONECUT3O60422 494 aaPredicted RBP8.36□□□□□ -1.07
LINC01549-201ENST00000440664 SLC19A1P41440 591 aa8.35□□□□□ -1.07
LINC01549-201ENST00000440664 PRR20EP86478 221 aa8.35□□□□□ -1.07
LINC01549-201ENST00000440664 PRR20CP86479 221 aa8.35□□□□□ -1.07
LINC01549-201ENST00000440664 PRR20DP86480 221 aa8.35□□□□□ -1.07
LINC01549-201ENST00000440664 PRR20BP86481 221 aa8.35□□□□□ -1.07
LINC01549-201ENST00000440664 PRR20AP86496 221 aa8.35□□□□□ -1.07
LINC01549-201ENST00000440664 PKD2Q13563 968 aa8.35□□□□□ -1.07
LINC01549-201ENST00000440664 NKX2-3Q8TAU0 364 aa8.35□□□□□ -1.07
LINC01549-201ENST00000440664 C11orf95C9JLR9 678 aaPredicted RBP8.33□□□□□ -1.08
LINC01549-201ENST00000440664 PCDHGA10Q9Y5H3 936 aa8.33□□□□□ -1.08
LINC01549-201ENST00000440664 TRIM6-TRIM34B2RNG4 842 aa8.32□□□□□ -1.08
LINC01549-201ENST00000440664 TNFRSF10AO00220 468 aa8.32□□□□□ -1.08
LINC01549-201ENST00000440664 TMUB1Q9BVT8 246 aa8.31□□□□□ -1.08
LINC01549-201ENST00000440664 FBXW7Q969H0 707 aa8.3□□□□□ -1.08
LINC01549-201ENST00000440664 ECM2O94769 699 aaPredicted RBP8.29□□□□□ -1.08
LINC01549-201ENST00000440664 ZNF598Q86UK7 904 aaKnown RBP8.29□□□□□ -1.08
LINC01549-201ENST00000440664 GMPR2Q9P2T1 348 aaKnown RBP8.29□□□□□ -1.08
LINC01549-201ENST00000440664 PPP1R15BQ5SWA1 713 aa8.28□□□□□ -1.08
LINC01549-201ENST00000440664 SPRYD7Q5W111 196 aa8.28□□□□□ -1.08
LINC01549-201ENST00000440664 TYW1BQ6NUM6 668 aa8.28□□□□□ -1.08
LINC01549-201ENST00000440664 DACH1Q9UI36 760 aa8.27□□□□□ -1.09
LINC01549-201ENST00000440664 ZNF697Q5TEC3 545 aa8.26□□□□□ -1.09
LINC01549-201ENST00000440664 RGL2O15211 777 aa8.25□□□□□ -1.09
LINC01549-201ENST00000440664 LCE2CQ5TA81 110 aa8.25□□□□□ -1.09
LINC01549-201ENST00000440664 SAMD7Q7Z3H4 446 aa8.25□□□□□ -1.09
LINC01549-201ENST00000440664 EMID1Q96A84 441 aaPredicted RBP8.24□□□□□ -1.09
LINC01549-201ENST00000440664 COPS2P61201 443 aa8.23□□□□□ -1.09
LINC01549-201ENST00000440664 MAP3K9P80192 1104 aa8.23□□□□□ -1.09
LINC01549-201ENST00000440664 RNF223E7ERA6 249 aa8.21□□□□□ -1.1
LINC01549-201ENST00000440664 TERTO14746 1132 aaKnown RBP8.21□□□□□ -1.1
LINC01549-201ENST00000440664 GDF9O60383 454 aa8.21□□□□□ -1.1
LINC01549-201ENST00000440664 RNF40O75150 1001 aa8.21□□□□□ -1.1
LINC01549-201ENST00000440664 C6orf132Q5T0Z8 1188 aa8.21□□□□□ -1.1
LINC01549-201ENST00000440664 PACS2Q86VP3 889 aa8.21□□□□□ -1.1
LINC01549-201ENST00000440664 PHF14O94880 888 aa8.2□□□□□ -1.1
LINC01549-201ENST00000440664 APLP1P51693 650 aa8.2□□□□□ -1.1
LINC01549-201ENST00000440664 CRIPAKQ8N1N5 446 aa8.2□□□□□ -1.1
LINC01549-201ENST00000440664 AXIN1O15169 862 aa8.19□□□□□ -1.1
LINC01549-201ENST00000440664 ZSCAN1Q8NBB4 408 aa8.19□□□□□ -1.1
LINC01549-201ENST00000440664 CRISPLD2Q9H0B8 497 aa8.17□□□□□ -1.1
LINC01549-201ENST00000440664 SMAPO00193 183 aa8.14□□□□□ -1.11
LINC01549-201ENST00000440664 ZPR1O75312 459 aa8.14□□□□□ -1.11
LINC01549-201ENST00000440664 LIAT1Q6ZQX7 453 aa8.14□□□□□ -1.11
LINC01549-201ENST00000440664 TSKSQ9UJT2 592 aa8.13□□□□□ -1.11
LINC01549-201ENST00000440664 KCTD17Q8N5Z5 321 aa8.12□□□□□ -1.11
LINC01549-201ENST00000440664 ANKLE1Q8NAG6 615 aa8.12□□□□□ -1.11
LINC01549-201ENST00000440664 RBM33Q96EV2 1170 aaKnown RBP8.12□□□□□ -1.11
LINC01549-201ENST00000440664 FOXC1Q12948 553 aa8.1□□□□□ -1.11
LINC01549-201ENST00000440664 CTC1Q2NKJ3 1217 aa8.1□□□□□ -1.11
LINC01549-201ENST00000440664 HS6ST3Q8IZP7 471 aa8.1□□□□□ -1.11
LINC01549-201ENST00000440664 PPEF1O14829 653 aaPredicted RBP8.09□□□□□ -1.11
LINC01549-201ENST00000440664 AVPP01185 164 aa8.09□□□□□ -1.11
LINC01549-201ENST00000440664 SNRPBP14678 240 aaKnown RBP8.09□□□□□ -1.11
LINC01549-201ENST00000440664 HDGFP51858 240 aaKnown RBP8.09□□□□□ -1.11
LINC01549-201ENST00000440664 SLC16A10Q8TF71 515 aa8.09□□□□□ -1.11
LINC01549-201ENST00000440664 EPAS1Q99814 870 aa8.09□□□□□ -1.11
LINC01549-201ENST00000440664 LORP23490 312 aaPredicted RBP8.08□□□□□ -1.12
LINC01549-201ENST00000440664 GMPRP36959 345 aa8.07□□□□□ -1.12
LINC01549-201ENST00000440664 NECTIN2Q92692 538 aa8.07□□□□□ -1.12
LINC01549-201ENST00000440664 DNAJC5Q9H3Z4 198 aa8.07□□□□□ -1.12
LINC01549-201ENST00000440664 PDE4AP27815 886 aa8.06□□□□□ -1.12
LINC01549-201ENST00000440664 XP32Q5T750 250 aa8.06□□□□□ -1.12
LINC01549-201ENST00000440664 NCKAP5LQ9HCH0 1330 aa8.04□□□□□ -1.12
LINC01549-201ENST00000440664 LMOD2Q6P5Q4 547 aa8.04□□□□□ -1.12
LINC01549-201ENST00000440664 PKD2L1Q9P0L9 805 aa8.04□□□□□ -1.12
LINC01549-201ENST00000440664 TLL1O43897 1013 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms