RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 EHBP1L1Q8N3D4 1523 aa12.86□□□□□ -0.35
SP1-202ENST00000426431 MYBBP1AQ9BQG0 1328 aaKnown RBP12.86□□□□□ -0.35
SP1-202ENST00000426431 DHX57Q6P158 1386 aaKnown RBP12.86□□□□□ -0.35
SP1-202ENST00000426431 ARHGAP5Q13017 1502 aa12.85□□□□□ -0.35
SP1-202ENST00000426431 RRBP1Q9P2E9 1410 aaKnown RBP12.85□□□□□ -0.35
SP1-202ENST00000426431 HSP90AB1P08238 724 aaKnown RBP12.85□□□□□ -0.35
SP1-202ENST00000426431 HECW1Q76N89 1606 aa12.85□□□□□ -0.35
SP1-202ENST00000426431 HSCBQ8IWL3 235 aa12.85□□□□□ -0.35
SP1-202ENST00000426431 RCAN3Q9UKA8 241 aa12.85□□□□□ -0.35
SP1-202ENST00000426431 ANKRD50Q9ULJ7 1429 aa12.84□□□□□ -0.35
SP1-202ENST00000426431 RGS3P49796 1198 aa12.83□□□□□ -0.36
SP1-202ENST00000426431 HFM1A2PYH4 1435 aa12.83□□□□□ -0.36
SP1-202ENST00000426431 TRAK1Q9UPV9 953 aa12.83□□□□□ -0.36
SP1-202ENST00000426431 NCOA2Q15596 1464 aa12.83□□□□□ -0.36
SP1-202ENST00000426431 CHMP4CQ96CF2 233 aa12.82□□□□□ -0.36
SP1-202ENST00000426431 POLA1P09884 1462 aaPredicted RBP12.82□□□□□ -0.36
SP1-202ENST00000426431 CCDC9Q9Y3X0 531 aaKnown RBP12.81□□□□□ -0.36
SP1-202ENST00000426431 HTATSF1O43719 755 aaKnown RBP12.81□□□□□ -0.36
SP1-202ENST00000426431 POGZQ7Z3K3 1410 aa12.81□□□□□ -0.36
SP1-202ENST00000426431 USP47Q96K76 1375 aa12.81□□□□□ -0.36
SP1-202ENST00000426431 SCAPERQ9BY12 1400 aa12.81□□□□□ -0.36
SP1-202ENST00000426431 GOLGA6L4A6NEF3 574 aa12.8□□□□□ -0.36
SP1-202ENST00000426431 GLIPR1L2Q4G1C9 344 aa12.8□□□□□ -0.36
SP1-202ENST00000426431 C1orf141Q5JVX7 400 aa12.8□□□□□ -0.36
SP1-202ENST00000426431 KIAA0586Q9BVV6 1533 aa12.79□□□□□ -0.36
SP1-202ENST00000426431 CUL7Q14999 1698 aa12.79□□□□□ -0.36
SP1-202ENST00000426431 TROQ12816 1431 aaPredicted RBP12.79□□□□□ -0.36
SP1-202ENST00000426431 PRXQ9BXM0 1461 aa12.79□□□□□ -0.36
SP1-202ENST00000426431 CENPJQ9HC77 1338 aaPredicted RBP12.79□□□□□ -0.36
SP1-202ENST00000426431 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
SP1-202ENST00000426431 ST20-MTHFSA0A0A6YYL1 179 aa12.78□□□□□ -0.36
SP1-202ENST00000426431 TAF7LQ5H9L4 462 aa12.78□□□□□ -0.36
SP1-202ENST00000426431 SYNJ1O43426 1573 aa12.78□□□□□ -0.36
SP1-202ENST00000426431 ITPRIPQ8IWB1 547 aa12.78□□□□□ -0.36
SP1-202ENST00000426431 PTMAP06454 111 aaKnown RBP12.78□□□□□ -0.36
SP1-202ENST00000426431 CCDC34Q96HJ3 373 aa12.78□□□□□ -0.36
SP1-202ENST00000426431 ABCA10Q8WWZ4 1543 aa12.77□□□□□ -0.36
SP1-202ENST00000426431 NBR1Q14596 966 aa12.77□□□□□ -0.36
SP1-202ENST00000426431 SNAPC4Q5SXM2 1469 aa12.77□□□□□ -0.36
SP1-202ENST00000426431 TCERG1O14776 1098 aaKnown RBP12.77□□□□□ -0.36
SP1-202ENST00000426431 GORABQ5T7V8 394 aa12.77□□□□□ -0.37
SP1-202ENST00000426431 LRRFIP1Q32MZ4 808 aaKnown RBP12.76□□□□□ -0.37
SP1-202ENST00000426431 MAGI1Q96QZ7 1491 aaPredicted RBP12.76□□□□□ -0.37
SP1-202ENST00000426431 E9PSI1 815 aa12.75□□□□□ -0.37
SP1-202ENST00000426431 EVA1CP58658 441 aa12.75□□□□□ -0.37
SP1-202ENST00000426431 PANK3Q9H999 370 aa12.75□□□□□ -0.37
SP1-202ENST00000426431 SLC52A1Q9NWF4 448 aa12.75□□□□□ -0.37
SP1-202ENST00000426431 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.74□□□□□ -0.37
SP1-202ENST00000426431 ATF3P18847 181 aa12.74□□□□□ -0.37
SP1-202ENST00000426431 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.74□□□□□ -0.37
SP1-202ENST00000426431 NAP1L2Q9ULW6 460 aaPredicted RBP12.74□□□□□ -0.37
SP1-202ENST00000426431 NESP48681 1621 aa12.74□□□□□ -0.37
SP1-202ENST00000426431 HMGB2P26583 209 aaKnown RBP12.74□□□□□ -0.37
SP1-202ENST00000426431 ROCK1Q13464 1354 aa12.74□□□□□ -0.37
SP1-202ENST00000426431 L1TD1Q5T7N2 865 aaKnown RBP12.74□□□□□ -0.37
SP1-202ENST00000426431 TEFQ10587 303 aa12.73□□□□□ -0.37
SP1-202ENST00000426431 KIF3AQ9Y496 699 aa12.73□□□□□ -0.37
SP1-202ENST00000426431 AAMPQ13685 434 aa12.73□□□□□ -0.37
SP1-202ENST00000426431 PSME1Q06323 249 aa12.73□□□□□ -0.37
SP1-202ENST00000426431 WWC1Q8IX03 1113 aa12.72□□□□□ -0.37
SP1-202ENST00000426431 RPGRIP1LQ68CZ1 1315 aa12.72□□□□□ -0.37
SP1-202ENST00000426431 SUPT6HQ7KZ85 1726 aaKnown RBP12.72□□□□□ -0.37
SP1-202ENST00000426431 THEMISQ8N1K5 641 aaPredicted RBP12.72□□□□□ -0.37
SP1-202ENST00000426431 PEG3Q9GZU2 1588 aa12.72□□□□□ -0.37
SP1-202ENST00000426431 GNL2Q13823 731 aaKnown RBP12.72□□□□□ -0.37
SP1-202ENST00000426431 AEBP2Q6ZN18 517 aaPredicted RBP12.71□□□□□ -0.37
SP1-202ENST00000426431 NEXNQ0ZGT2 675 aa12.71□□□□□ -0.37
SP1-202ENST00000426431 NUTM2DQ5VT03 806 aaPredicted RBP12.71□□□□□ -0.37
SP1-202ENST00000426431 TTC5Q8N0Z6 440 aa12.71□□□□□ -0.37
SP1-202ENST00000426431 C9orf84Q5VXU9 1444 aa12.71□□□□□ -0.37
SP1-202ENST00000426431 IQGAP2Q13576 1575 aa12.71□□□□□ -0.38
SP1-202ENST00000426431 DIAPH1O60610 1272 aaKnown RBP12.71□□□□□ -0.38
SP1-202ENST00000426431 GTF2E1P29083 439 aaPredicted RBP12.7□□□□□ -0.38
SP1-202ENST00000426431 WASHC2AQ641Q2 1341 aa12.7□□□□□ -0.38
SP1-202ENST00000426431 ZNF330Q9Y3S2 320 aaPredicted RBP12.7□□□□□ -0.38
SP1-202ENST00000426431 G3V3G9 751 aa12.7□□□□□ -0.38
SP1-202ENST00000426431 CSPP1Q1MSJ5 1256 aa12.7□□□□□ -0.38
SP1-202ENST00000426431 DCAF8Q5TAQ9 597 aa12.7□□□□□ -0.38
SP1-202ENST00000426431 MINK1Q8N4C8 1332 aaPredicted RBP12.7□□□□□ -0.38
SP1-202ENST00000426431 GBP4Q96PP9 640 aa12.7□□□□□ -0.38
SP1-202ENST00000426431 DDX58O95786 925 aaKnown RBP12.69□□□□□ -0.38
SP1-202ENST00000426431 NOP58Q9Y2X3 529 aaKnown RBP12.69□□□□□ -0.38
SP1-202ENST00000426431 GPRASP1Q5JY77 1395 aa12.69□□□□□ -0.38
SP1-202ENST00000426431 ANO8Q9HCE9 1232 aaPredicted RBP12.69□□□□□ -0.38
SP1-202ENST00000426431 BICRAQ9NZM4 1560 aa12.69□□□□□ -0.38
SP1-202ENST00000426431 B4GALNT3Q6L9W6 998 aa12.68□□□□□ -0.38
SP1-202ENST00000426431 SYAP1Q96A49 352 aaPredicted RBP12.68□□□□□ -0.38
SP1-202ENST00000426431 API5Q9BZZ5 524 aaKnown RBP12.67□□□□□ -0.38
SP1-202ENST00000426431 CHMP3Q9Y3E7 222 aa12.67□□□□□ -0.38
SP1-202ENST00000426431 CNTLNQ9NXG0 1405 aa12.67□□□□□ -0.38
SP1-202ENST00000426431 HSP90B1P14625 803 aaKnown RBP12.66□□□□□ -0.38
SP1-202ENST00000426431 LTV1Q96GA3 475 aaPredicted RBP12.66□□□□□ -0.38
SP1-202ENST00000426431 PRKRIP1Q9H875 184 aaPredicted RBP12.66□□□□□ -0.38
SP1-202ENST00000426431 ZKSCAN2Q63HK3 967 aa12.66□□□□□ -0.38
SP1-202ENST00000426431 ANKRD30BQ9BXX2 1392 aa12.66□□□□□ -0.38
SP1-202ENST00000426431 ARAP1Q96P48 1450 aa12.66□□□□□ -0.38
SP1-202ENST00000426431 ZBED9Q6R2W3 1325 aa12.66□□□□□ -0.38
SP1-202ENST00000426431 TIAM1Q13009 1591 aa12.65□□□□□ -0.38
SP1-202ENST00000426431 KIAA1107Q9UPP5 1409 aa12.65□□□□□ -0.38
SP1-202ENST00000426431 SENP3-EIF4A1A0A087X0R7 540 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms