RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 RGL2O15211 777 aa7.19□□□□□ -1.26
RNU6-1140P-201ENST00000410517 PPP1R15BQ5SWA1 713 aa7.19□□□□□ -1.26
RNU6-1140P-201ENST00000410517 TSR3Q9UJK0 312 aaKnown RBP7.19□□□□□ -1.26
RNU6-1140P-201ENST00000410517 PDZRN3Q9UPQ7 1066 aa7.19□□□□□ -1.26
RNU6-1140P-201ENST00000410517 HPS5Q9UPZ3 1129 aa7.19□□□□□ -1.26
RNU6-1140P-201ENST00000410517 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.18□□□□□ -1.26
RNU6-1140P-201ENST00000410517 V9GY48 417 aaPredicted RBP7.17□□□□□ -1.26
RNU6-1140P-201ENST00000410517 LRCH3Q96II8 777 aa7.16□□□□□ -1.26
RNU6-1140P-201ENST00000410517 PPP1R18Q6NYC8 613 aa7.15□□□□□ -1.26
RNU6-1140P-201ENST00000410517 PCDHGA10Q9Y5H3 936 aa7.15□□□□□ -1.26
RNU6-1140P-201ENST00000410517 MAP3K9P80192 1104 aa7.14□□□□□ -1.27
RNU6-1140P-201ENST00000410517 CRISPLD2Q9H0B8 497 aa7.14□□□□□ -1.27
RNU6-1140P-201ENST00000410517 FAM98CQ17RN3 349 aaKnown RBP7.13□□□□□ -1.27
RNU6-1140P-201ENST00000410517 TJAP1Q5JTD0 557 aa7.13□□□□□ -1.27
RNU6-1140P-201ENST00000410517 PPP4CP60510 307 aa7.12□□□□□ -1.27
RNU6-1140P-201ENST00000410517 ONECUT3O60422 494 aaPredicted RBP7.11□□□□□ -1.27
RNU6-1140P-201ENST00000410517 TYW1BQ6NUM6 668 aa7.11□□□□□ -1.27
RNU6-1140P-201ENST00000410517 FBXW7Q969H0 707 aa7.11□□□□□ -1.27
RNU6-1140P-201ENST00000410517 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.1□□□□□ -1.27
RNU6-1140P-201ENST00000410517 TRIM6-TRIM34B2RNG4 842 aa7.08□□□□□ -1.28
RNU6-1140P-201ENST00000410517 POTECB2RU33 542 aa7.08□□□□□ -1.28
RNU6-1140P-201ENST00000410517 PDE4AP27815 886 aa7.08□□□□□ -1.28
RNU6-1140P-201ENST00000410517 MTRQ99707 1265 aa7.08□□□□□ -1.28
RNU6-1140P-201ENST00000410517 IL21Q9HBE4 155 aa7.08□□□□□ -1.28
RNU6-1140P-201ENST00000410517 PHF14O94880 888 aa7.06□□□□□ -1.28
RNU6-1140P-201ENST00000410517 PKD2Q13563 968 aa7.06□□□□□ -1.28
RNU6-1140P-201ENST00000410517 C6orf132Q5T0Z8 1188 aa7.06□□□□□ -1.28
RNU6-1140P-201ENST00000410517 TREML4Q6UXN2 200 aa7.06□□□□□ -1.28
RNU6-1140P-201ENST00000410517 NCKAP5LQ9HCH0 1330 aa7.05□□□□□ -1.28
RNU6-1140P-201ENST00000410517 PKDCCQ504Y2 493 aa7.05□□□□□ -1.28
RNU6-1140P-201ENST00000410517 ZNF516Q92618 1163 aa7.05□□□□□ -1.28
RNU6-1140P-201ENST00000410517 MYT1Q01538 1121 aa7.04□□□□□ -1.28
RNU6-1140P-201ENST00000410517 NKX2-3Q8TAU0 364 aa7.03□□□□□ -1.28
RNU6-1140P-201ENST00000410517 LARP6Q9BRS8 491 aaKnown RBP7.03□□□□□ -1.28
RNU6-1140P-201ENST00000410517 GGCXP38435 758 aa7.02□□□□□ -1.29
RNU6-1140P-201ENST00000410517 PACS2Q86VP3 889 aa7.02□□□□□ -1.29
RNU6-1140P-201ENST00000410517 HS6ST3Q8IZP7 471 aa7.02□□□□□ -1.29
RNU6-1140P-201ENST00000410517 DDX27Q96GQ7 796 aaKnown RBP7.02□□□□□ -1.29
RNU6-1140P-201ENST00000410517 SAMD7Q7Z3H4 446 aa7.01□□□□□ -1.29
RNU6-1140P-201ENST00000410517 RBM33Q96EV2 1170 aaKnown RBP7.01□□□□□ -1.29
RNU6-1140P-201ENST00000410517 EMILIN3Q9NT22 766 aa7.01□□□□□ -1.29
RNU6-1140P-201ENST00000410517 DGAT1O75907 488 aa7□□□□□ -1.29
RNU6-1140P-201ENST00000410517 LCE2AQ5TA79 106 aaPredicted RBP7□□□□□ -1.29
RNU6-1140P-201ENST00000410517 TRIM67Q6ZTA4 783 aa6.99□□□□□ -1.29
RNU6-1140P-201ENST00000410517 EPAS1Q99814 870 aa6.99□□□□□ -1.29
RNU6-1140P-201ENST00000410517 SMAPO00193 183 aa6.97□□□□□ -1.29
RNU6-1140P-201ENST00000410517 RYDENQ9NUL5 291 aaKnown RBP6.97□□□□□ -1.29
RNU6-1140P-201ENST00000410517 STK17AQ9UEE5 414 aa6.97□□□□□ -1.29
RNU6-1140P-201ENST00000410517 TSKSQ9UJT2 592 aa6.97□□□□□ -1.29
RNU6-1140P-201ENST00000410517 CHGAP10645 457 aaKnown RBP6.96□□□□□ -1.3
RNU6-1140P-201ENST00000410517 FAM187AA6NFU0 413 aa6.95□□□□□ -1.3
RNU6-1140P-201ENST00000410517 RNF40O75150 1001 aa6.95□□□□□ -1.3
RNU6-1140P-201ENST00000410517 SLC19A1P41440 591 aa6.95□□□□□ -1.3
RNU6-1140P-201ENST00000410517 NKX1-1Q15270 411 aaPredicted RBP6.95□□□□□ -1.3
RNU6-1140P-201ENST00000410517 TMUB1Q9BVT8 246 aa6.95□□□□□ -1.3
RNU6-1140P-201ENST00000410517 APLP1P51693 650 aa6.94□□□□□ -1.3
RNU6-1140P-201ENST00000410517 COPS2P61201 443 aa6.94□□□□□ -1.3
RNU6-1140P-201ENST00000410517 WFS1O76024 890 aa6.93□□□□□ -1.3
RNU6-1140P-201ENST00000410517 ST8SIA5O15466 376 aa6.92□□□□□ -1.3
RNU6-1140P-201ENST00000410517 MFSD10Q14728 455 aa6.92□□□□□ -1.3
RNU6-1140P-201ENST00000410517 LOC100996750A0A140TA64 210 aa6.91□□□□□ -1.3
RNU6-1140P-201ENST00000410517 SPRYD7Q5W111 196 aa6.91□□□□□ -1.3
RNU6-1140P-201ENST00000410517 DDX12PQ92771 950 aa6.91□□□□□ -1.3
RNU6-1140P-201ENST00000410517 KRTAP4-6Q9BYQ5 205 aa6.91□□□□□ -1.3
RNU6-1140P-201ENST00000410517 HDGFP51858 240 aaKnown RBP6.9□□□□□ -1.3
RNU6-1140P-201ENST00000410517 PRR20EP86478 221 aa6.9□□□□□ -1.3
RNU6-1140P-201ENST00000410517 PRR20CP86479 221 aa6.9□□□□□ -1.3
RNU6-1140P-201ENST00000410517 PRR20DP86480 221 aa6.9□□□□□ -1.3
RNU6-1140P-201ENST00000410517 PRR20BP86481 221 aa6.9□□□□□ -1.3
RNU6-1140P-201ENST00000410517 PRR20AP86496 221 aa6.9□□□□□ -1.3
RNU6-1140P-201ENST00000410517 TSR1Q2NL82 804 aaKnown RBP6.9□□□□□ -1.3
RNU6-1140P-201ENST00000410517 ZNF598Q86UK7 904 aaKnown RBP6.9□□□□□ -1.3
RNU6-1140P-201ENST00000410517 EMID1Q96A84 441 aaPredicted RBP6.9□□□□□ -1.3
RNU6-1140P-201ENST00000410517 AAASQ9NRG9 546 aa6.9□□□□□ -1.3
RNU6-1140P-201ENST00000410517 RNF223E7ERA6 249 aa6.89□□□□□ -1.31
RNU6-1140P-201ENST00000410517 TNFRSF10AO00220 468 aa6.89□□□□□ -1.31
RNU6-1140P-201ENST00000410517 MAP3K7O43318 606 aa6.89□□□□□ -1.31
RNU6-1140P-201ENST00000410517 INSM1Q01101 510 aaPredicted RBP6.89□□□□□ -1.31
RNU6-1140P-201ENST00000410517 CDCA7LQ96GN5 454 aa6.89□□□□□ -1.31
RNU6-1140P-201ENST00000410517 ZPR1O75312 459 aa6.88□□□□□ -1.31
RNU6-1140P-201ENST00000410517 TATDN2Q93075 761 aa6.88□□□□□ -1.31
RNU6-1140P-201ENST00000410517 PNMA3Q9UL41 463 aa6.88□□□□□ -1.31
RNU6-1140P-201ENST00000410517 C3orf80F5H4A9 247 aa6.87□□□□□ -1.31
RNU6-1140P-201ENST00000410517 PRSS12P56730 875 aa6.87□□□□□ -1.31
RNU6-1140P-201ENST00000410517 ZNF697Q5TEC3 545 aa6.87□□□□□ -1.31
RNU6-1140P-201ENST00000410517 FAM198AQ9UFP1 575 aa6.87□□□□□ -1.31
RNU6-1140P-201ENST00000410517 NBPF26B4DH59 902 aa6.86□□□□□ -1.31
RNU6-1140P-201ENST00000410517 DPYSL4O14531 572 aa6.86□□□□□ -1.31
RNU6-1140P-201ENST00000410517 EN1Q05925 392 aaPredicted RBP6.86□□□□□ -1.31
RNU6-1140P-201ENST00000410517 NBR1Q14596 966 aa6.86□□□□□ -1.31
RNU6-1140P-201ENST00000410517 DNAJC5Q9H3Z4 198 aa6.86□□□□□ -1.31
RNU6-1140P-201ENST00000410517 C11orf95C9JLR9 678 aaPredicted RBP6.84□□□□□ -1.31
RNU6-1140P-201ENST00000410517 WIPF1O43516 503 aa6.84□□□□□ -1.31
RNU6-1140P-201ENST00000410517 GDF9O60383 454 aa6.84□□□□□ -1.31
RNU6-1140P-201ENST00000410517 LIAT1Q6ZQX7 453 aa6.84□□□□□ -1.31
RNU6-1140P-201ENST00000410517 NECTIN2Q92692 538 aa6.84□□□□□ -1.31
RNU6-1140P-201ENST00000410517 NFX1Q12986 1120 aaKnown RBP6.83□□□□□ -1.32
RNU6-1140P-201ENST00000410517 DACH1Q9UI36 760 aa6.83□□□□□ -1.32
RNU6-1140P-201ENST00000410517 PPEF1O14829 653 aaPredicted RBP6.82□□□□□ -1.32
RNU6-1140P-201ENST00000410517 NUDT18Q6ZVK8 323 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms