RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 PKD2Q13563 968 aa6.24□□□□□ -1.41
SNORA40-201ENST00000388090 PRKD2Q9BZL6 878 aa6.24□□□□□ -1.41
SNORA40-201ENST00000388090 KIAA1468Q9P260 1216 aa6.23□□□□□ -1.41
SNORA40-201ENST00000388090 PCDHGA10Q9Y5H3 936 aa6.23□□□□□ -1.41
SNORA40-201ENST00000388090 SEPT9Q9UHD8 586 aaPredicted RBP6.21□□□□□ -1.42
SNORA40-201ENST00000388090 TSR3Q9UJK0 312 aaKnown RBP6.21□□□□□ -1.42
SNORA40-201ENST00000388090 NCKAP5LQ9HCH0 1330 aa6.21□□□□□ -1.42
SNORA40-201ENST00000388090 ONECUT3O60422 494 aaPredicted RBP6.2□□□□□ -1.42
SNORA40-201ENST00000388090 HPS5Q9UPZ3 1129 aa6.2□□□□□ -1.42
SNORA40-201ENST00000388090 V9GY48 417 aaPredicted RBP6.2□□□□□ -1.42
SNORA40-201ENST00000388090 TJAP1Q5JTD0 557 aa6.19□□□□□ -1.42
SNORA40-201ENST00000388090 FAM98CQ17RN3 349 aaKnown RBP6.18□□□□□ -1.42
SNORA40-201ENST00000388090 HS6ST3Q8IZP7 471 aa6.18□□□□□ -1.42
SNORA40-201ENST00000388090 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.18□□□□□ -1.42
SNORA40-201ENST00000388090 PPP1R18Q6NYC8 613 aa6.17□□□□□ -1.42
SNORA40-201ENST00000388090 FBXW7Q969H0 707 aa6.17□□□□□ -1.42
SNORA40-201ENST00000388090 LRCH3Q96II8 777 aa6.17□□□□□ -1.42
SNORA40-201ENST00000388090 TYW1BQ6NUM6 668 aa6.16□□□□□ -1.42
SNORA40-201ENST00000388090 PDZRN3Q9UPQ7 1066 aa6.16□□□□□ -1.42
SNORA40-201ENST00000388090 TRIM6-TRIM34B2RNG4 842 aa6.15□□□□□ -1.42
SNORA40-201ENST00000388090 MAP3K9P80192 1104 aa6.15□□□□□ -1.42
SNORA40-201ENST00000388090 PHF14O94880 888 aa6.14□□□□□ -1.43
SNORA40-201ENST00000388090 PDE4AP27815 886 aa6.14□□□□□ -1.43
SNORA40-201ENST00000388090 C6orf132Q5T0Z8 1188 aa6.14□□□□□ -1.43
SNORA40-201ENST00000388090 EMILIN3Q9NT22 766 aa6.14□□□□□ -1.43
SNORA40-201ENST00000388090 NKX1-1Q15270 411 aaPredicted RBP6.13□□□□□ -1.43
SNORA40-201ENST00000388090 MTRQ99707 1265 aa6.12□□□□□ -1.43
SNORA40-201ENST00000388090 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.12□□□□□ -1.43
SNORA40-201ENST00000388090 POTECB2RU33 542 aa6.11□□□□□ -1.43
SNORA40-201ENST00000388090 PPP4CP60510 307 aa6.11□□□□□ -1.43
SNORA40-201ENST00000388090 LCE2AQ5TA79 106 aaPredicted RBP6.11□□□□□ -1.43
SNORA40-201ENST00000388090 IL21Q9HBE4 155 aa6.11□□□□□ -1.43
SNORA40-201ENST00000388090 MFSD10Q14728 455 aa6.1□□□□□ -1.43
SNORA40-201ENST00000388090 ZNF516Q92618 1163 aa6.1□□□□□ -1.43
SNORA40-201ENST00000388090 DDX27Q96GQ7 796 aaKnown RBP6.1□□□□□ -1.43
SNORA40-201ENST00000388090 LARP6Q9BRS8 491 aaKnown RBP6.1□□□□□ -1.43
SNORA40-201ENST00000388090 TRIM67Q6ZTA4 783 aa6.09□□□□□ -1.43
SNORA40-201ENST00000388090 DNAJC5Q9H3Z4 198 aa6.09□□□□□ -1.43
SNORA40-201ENST00000388090 TSKSQ9UJT2 592 aa6.08□□□□□ -1.44
SNORA40-201ENST00000388090 MYT1Q01538 1121 aa6.07□□□□□ -1.44
SNORA40-201ENST00000388090 NKX2-3Q8TAU0 364 aa6.07□□□□□ -1.44
SNORA40-201ENST00000388090 EPAS1Q99814 870 aa6.07□□□□□ -1.44
SNORA40-201ENST00000388090 SAMD7Q7Z3H4 446 aa6.06□□□□□ -1.44
SNORA40-201ENST00000388090 RYDENQ9NUL5 291 aaKnown RBP6.06□□□□□ -1.44
SNORA40-201ENST00000388090 CHGAP10645 457 aaKnown RBP6.05□□□□□ -1.44
SNORA40-201ENST00000388090 TREML4Q6UXN2 200 aa6.05□□□□□ -1.44
SNORA40-201ENST00000388090 PACS2Q86VP3 889 aa6.04□□□□□ -1.44
SNORA40-201ENST00000388090 RBM33Q96EV2 1170 aaKnown RBP6.04□□□□□ -1.44
SNORA40-201ENST00000388090 APLP1P51693 650 aa6.03□□□□□ -1.44
SNORA40-201ENST00000388090 EMID1Q96A84 441 aaPredicted RBP6.03□□□□□ -1.44
SNORA40-201ENST00000388090 SMAPO00193 183 aa6.02□□□□□ -1.45
SNORA40-201ENST00000388090 DGAT1O75907 488 aa6.02□□□□□ -1.45
SNORA40-201ENST00000388090 C3orf80F5H4A9 247 aa6.01□□□□□ -1.45
SNORA40-201ENST00000388090 PKDCCQ504Y2 493 aa6.01□□□□□ -1.45
SNORA40-201ENST00000388090 TMUB1Q9BVT8 246 aa6.01□□□□□ -1.45
SNORA40-201ENST00000388090 FAM198AQ9UFP1 575 aa6.01□□□□□ -1.45
SNORA40-201ENST00000388090 GGCXP38435 758 aa6□□□□□ -1.45
SNORA40-201ENST00000388090 TSR1Q2NL82 804 aaKnown RBP6□□□□□ -1.45
SNORA40-201ENST00000388090 PRR20EP86478 221 aa5.99□□□□□ -1.45
SNORA40-201ENST00000388090 PRR20CP86479 221 aa5.99□□□□□ -1.45
SNORA40-201ENST00000388090 PRR20DP86480 221 aa5.99□□□□□ -1.45
SNORA40-201ENST00000388090 PRR20BP86481 221 aa5.99□□□□□ -1.45
SNORA40-201ENST00000388090 PRR20AP86496 221 aa5.99□□□□□ -1.45
SNORA40-201ENST00000388090 EN1Q05925 392 aaPredicted RBP5.99□□□□□ -1.45
SNORA40-201ENST00000388090 SLC19A1P41440 591 aa5.98□□□□□ -1.45
SNORA40-201ENST00000388090 CAMK2BQ13554 666 aa5.98□□□□□ -1.45
SNORA40-201ENST00000388090 DDX12PQ92771 950 aa5.98□□□□□ -1.45
SNORA40-201ENST00000388090 CDCA7LQ96GN5 454 aa5.98□□□□□ -1.45
SNORA40-201ENST00000388090 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
SNORA40-201ENST00000388090 DPYSL4O14531 572 aa5.97□□□□□ -1.45
SNORA40-201ENST00000388090 GTPBP6O43824 516 aaPredicted RBP5.97□□□□□ -1.45
SNORA40-201ENST00000388090 COPS2P61201 443 aa5.97□□□□□ -1.45
SNORA40-201ENST00000388090 SPRYD7Q5W111 196 aa5.97□□□□□ -1.45
SNORA40-201ENST00000388090 KRTAP4-6Q9BYQ5 205 aa5.97□□□□□ -1.45
SNORA40-201ENST00000388090 RNF223E7ERA6 249 aa5.96□□□□□ -1.46
SNORA40-201ENST00000388090 PRSS12P56730 875 aa5.96□□□□□ -1.46
SNORA40-201ENST00000388090 TATDN2Q93075 761 aa5.96□□□□□ -1.46
SNORA40-201ENST00000388090 STK17AQ9UEE5 414 aa5.96□□□□□ -1.46
SNORA40-201ENST00000388090 ST8SIA5O15466 376 aa5.95□□□□□ -1.46
SNORA40-201ENST00000388090 MAP3K7O43318 606 aa5.95□□□□□ -1.46
SNORA40-201ENST00000388090 ZPR1O75312 459 aa5.95□□□□□ -1.46
SNORA40-201ENST00000388090 ZNF598Q86UK7 904 aaKnown RBP5.95□□□□□ -1.46
SNORA40-201ENST00000388090 AAASQ9NRG9 546 aa5.95□□□□□ -1.46
SNORA40-201ENST00000388090 GDF9O60383 454 aa5.94□□□□□ -1.46
SNORA40-201ENST00000388090 NBR1Q14596 966 aa5.94□□□□□ -1.46
SNORA40-201ENST00000388090 CADPS2Q86UW7 1296 aa5.94□□□□□ -1.46
SNORA40-201ENST00000388090 PNMA3Q9UL41 463 aa5.94□□□□□ -1.46
SNORA40-201ENST00000388090 FAM187AA6NFU0 413 aa5.93□□□□□ -1.46
SNORA40-201ENST00000388090 NBPF26B4DH59 902 aa5.93□□□□□ -1.46
SNORA40-201ENST00000388090 RNF40O75150 1001 aa5.93□□□□□ -1.46
SNORA40-201ENST00000388090 WFS1O76024 890 aa5.93□□□□□ -1.46
SNORA40-201ENST00000388090 WIPF1O43516 503 aa5.92□□□□□ -1.46
SNORA40-201ENST00000388090 LIAT1Q6ZQX7 453 aa5.92□□□□□ -1.46
SNORA40-201ENST00000388090 TNFRSF10AO00220 468 aa5.91□□□□□ -1.46
SNORA40-201ENST00000388090 PRIM1P49642 420 aaKnown RBP5.91□□□□□ -1.46
SNORA40-201ENST00000388090 NFX1Q12986 1120 aaKnown RBP5.91□□□□□ -1.46
SNORA40-201ENST00000388090 ZNF697Q5TEC3 545 aa5.91□□□□□ -1.46
SNORA40-201ENST00000388090 NUDT18Q6ZVK8 323 aa5.9□□□□□ -1.46
SNORA40-201ENST00000388090 ANKLE1Q8NAG6 615 aa5.9□□□□□ -1.46
SNORA40-201ENST00000388090 CERKQ8TCT0 537 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms