RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 PDZRN3Q9UPQ7 1066 aa5.4□□□□□ -1.54
RNU6-880P-201ENST00000384526 SEPT9Q9UHD8 586 aaPredicted RBP5.39□□□□□ -1.55
RNU6-880P-201ENST00000384526 POTECB2RU33 542 aa5.38□□□□□ -1.55
RNU6-880P-201ENST00000384526 TSR3Q9UJK0 312 aaKnown RBP5.38□□□□□ -1.55
RNU6-880P-201ENST00000384526 HPS5Q9UPZ3 1129 aa5.38□□□□□ -1.55
RNU6-880P-201ENST00000384526 TJAP1Q5JTD0 557 aa5.37□□□□□ -1.55
RNU6-880P-201ENST00000384526 KIAA1468Q9P260 1216 aa5.37□□□□□ -1.55
RNU6-880P-201ENST00000384526 EVI5O60447 810 aa5.36□□□□□ -1.55
RNU6-880P-201ENST00000384526 PPP1R18Q6NYC8 613 aa5.36□□□□□ -1.55
RNU6-880P-201ENST00000384526 CRISPLD2Q9H0B8 497 aa5.36□□□□□ -1.55
RNU6-880P-201ENST00000384526 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.36□□□□□ -1.55
RNU6-880P-201ENST00000384526 PPP1R15BQ5SWA1 713 aa5.35□□□□□ -1.55
RNU6-880P-201ENST00000384526 TREML4Q6UXN2 200 aa5.35□□□□□ -1.55
RNU6-880P-201ENST00000384526 PCDHGA10Q9Y5H3 936 aa5.35□□□□□ -1.55
RNU6-880P-201ENST00000384526 FAM98CQ17RN3 349 aaKnown RBP5.34□□□□□ -1.55
RNU6-880P-201ENST00000384526 TRIM67Q6ZTA4 783 aa5.34□□□□□ -1.55
RNU6-880P-201ENST00000384526 LRCH3Q96II8 777 aa5.34□□□□□ -1.55
RNU6-880P-201ENST00000384526 MTRQ99707 1265 aa5.33□□□□□ -1.56
RNU6-880P-201ENST00000384526 MYT1Q01538 1121 aa5.32□□□□□ -1.56
RNU6-880P-201ENST00000384526 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.32□□□□□ -1.56
RNU6-880P-201ENST00000384526 RGL2O15211 777 aa5.31□□□□□ -1.56
RNU6-880P-201ENST00000384526 ONECUT3O60422 494 aaPredicted RBP5.31□□□□□ -1.56
RNU6-880P-201ENST00000384526 TRIM6-TRIM34B2RNG4 842 aa5.3□□□□□ -1.56
RNU6-880P-201ENST00000384526 IL21Q9HBE4 155 aa5.3□□□□□ -1.56
RNU6-880P-201ENST00000384526 ECM2O94769 699 aaPredicted RBP5.29□□□□□ -1.56
RNU6-880P-201ENST00000384526 TYW1BQ6NUM6 668 aa5.29□□□□□ -1.56
RNU6-880P-201ENST00000384526 ZNF516Q92618 1163 aa5.29□□□□□ -1.56
RNU6-880P-201ENST00000384526 FBXW7Q969H0 707 aa5.29□□□□□ -1.56
RNU6-880P-201ENST00000384526 STK17AQ9UEE5 414 aa5.29□□□□□ -1.56
RNU6-880P-201ENST00000384526 NCKAP5LQ9HCH0 1330 aa5.28□□□□□ -1.56
RNU6-880P-201ENST00000384526 PPP4CP60510 307 aa5.27□□□□□ -1.57
RNU6-880P-201ENST00000384526 PKDCCQ504Y2 493 aa5.27□□□□□ -1.57
RNU6-880P-201ENST00000384526 NKX2-3Q8TAU0 364 aa5.27□□□□□ -1.57
RNU6-880P-201ENST00000384526 DGAT1O75907 488 aa5.26□□□□□ -1.57
RNU6-880P-201ENST00000384526 PHF14O94880 888 aa5.26□□□□□ -1.57
RNU6-880P-201ENST00000384526 EMID1Q96A84 441 aaPredicted RBP5.26□□□□□ -1.57
RNU6-880P-201ENST00000384526 C6orf132Q5T0Z8 1188 aa5.25□□□□□ -1.57
RNU6-880P-201ENST00000384526 ST8SIA5O15466 376 aa5.24□□□□□ -1.57
RNU6-880P-201ENST00000384526 SAMD7Q7Z3H4 446 aa5.24□□□□□ -1.57
RNU6-880P-201ENST00000384526 EMILIN3Q9NT22 766 aa5.24□□□□□ -1.57
RNU6-880P-201ENST00000384526 WIPF1O43516 503 aa5.23□□□□□ -1.57
RNU6-880P-201ENST00000384526 WFS1O76024 890 aa5.23□□□□□ -1.57
RNU6-880P-201ENST00000384526 MAP3K9P80192 1104 aa5.23□□□□□ -1.57
RNU6-880P-201ENST00000384526 PRR20EP86478 221 aa5.23□□□□□ -1.57
RNU6-880P-201ENST00000384526 PRR20CP86479 221 aa5.23□□□□□ -1.57
RNU6-880P-201ENST00000384526 PRR20DP86480 221 aa5.23□□□□□ -1.57
RNU6-880P-201ENST00000384526 PRR20BP86481 221 aa5.23□□□□□ -1.57
RNU6-880P-201ENST00000384526 PRR20AP86496 221 aa5.23□□□□□ -1.57
RNU6-880P-201ENST00000384526 FAM187AA6NFU0 413 aa5.22□□□□□ -1.57
RNU6-880P-201ENST00000384526 APLP1P51693 650 aa5.22□□□□□ -1.57
RNU6-880P-201ENST00000384526 TSKSQ9UJT2 592 aa5.22□□□□□ -1.57
RNU6-880P-201ENST00000384526 GGCXP38435 758 aa5.21□□□□□ -1.58
RNU6-880P-201ENST00000384526 NFX1Q12986 1120 aaKnown RBP5.21□□□□□ -1.58
RNU6-880P-201ENST00000384526 PKD2Q13563 968 aa5.21□□□□□ -1.58
RNU6-880P-201ENST00000384526 LCE2CQ5TA81 110 aa5.21□□□□□ -1.58
RNU6-880P-201ENST00000384526 HS6ST3Q8IZP7 471 aa5.21□□□□□ -1.58
RNU6-880P-201ENST00000384526 AAASQ9NRG9 546 aa5.21□□□□□ -1.58
RNU6-880P-201ENST00000384526 SLC19A1P41440 591 aa5.2□□□□□ -1.58
RNU6-880P-201ENST00000384526 TMUB1Q9BVT8 246 aa5.2□□□□□ -1.58
RNU6-880P-201ENST00000384526 SMAPO00193 183 aa5.19□□□□□ -1.58
RNU6-880P-201ENST00000384526 INSM1Q01101 510 aaPredicted RBP5.19□□□□□ -1.58
RNU6-880P-201ENST00000384526 SPRYD7Q5W111 196 aa5.19□□□□□ -1.58
RNU6-880P-201ENST00000384526 EPAS1Q99814 870 aa5.19□□□□□ -1.58
RNU6-880P-201ENST00000384526 RNF223E7ERA6 249 aa5.18□□□□□ -1.58
RNU6-880P-201ENST00000384526 C3orf80F5H4A9 247 aa5.18□□□□□ -1.58
RNU6-880P-201ENST00000384526 TNFRSF10AO00220 468 aa5.18□□□□□ -1.58
RNU6-880P-201ENST00000384526 PDE4AP27815 886 aa5.18□□□□□ -1.58
RNU6-880P-201ENST00000384526 MFSD10Q14728 455 aa5.18□□□□□ -1.58
RNU6-880P-201ENST00000384526 NKX1-1Q15270 411 aaPredicted RBP5.18□□□□□ -1.58
RNU6-880P-201ENST00000384526 RBM33Q96EV2 1170 aaKnown RBP5.18□□□□□ -1.58
RNU6-880P-201ENST00000384526 DDX27Q96GQ7 796 aaKnown RBP5.18□□□□□ -1.58
RNU6-880P-201ENST00000384526 GDF9O60383 454 aa5.17□□□□□ -1.58
RNU6-880P-201ENST00000384526 COPS2P61201 443 aa5.17□□□□□ -1.58
RNU6-880P-201ENST00000384526 ZNF598Q86UK7 904 aaKnown RBP5.17□□□□□ -1.58
RNU6-880P-201ENST00000384526 PACS2Q86VP3 889 aa5.17□□□□□ -1.58
RNU6-880P-201ENST00000384526 FAM198AQ9UFP1 575 aa5.17□□□□□ -1.58
RNU6-880P-201ENST00000384526 DACH1Q9UI36 760 aa5.17□□□□□ -1.58
RNU6-880P-201ENST00000384526 LARP6Q9BRS8 491 aaKnown RBP5.16□□□□□ -1.58
RNU6-880P-201ENST00000384526 TSR1Q2NL82 804 aaKnown RBP5.15□□□□□ -1.59
RNU6-880P-201ENST00000384526 ZNF697Q5TEC3 545 aa5.15□□□□□ -1.59
RNU6-880P-201ENST00000384526 GMPR2Q9P2T1 348 aaKnown RBP5.15□□□□□ -1.59
RNU6-880P-201ENST00000384526 RNF40O75150 1001 aa5.14□□□□□ -1.59
RNU6-880P-201ENST00000384526 ZPR1O75312 459 aa5.14□□□□□ -1.59
RNU6-880P-201ENST00000384526 LIAT1Q6ZQX7 453 aa5.14□□□□□ -1.59
RNU6-880P-201ENST00000384526 CRIPAKQ8N1N5 446 aa5.14□□□□□ -1.59
RNU6-880P-201ENST00000384526 TLL1O43897 1013 aa5.12□□□□□ -1.59
RNU6-880P-201ENST00000384526 EN1Q05925 392 aaPredicted RBP5.12□□□□□ -1.59
RNU6-880P-201ENST00000384526 SUZ12Q15022 739 aaKnown RBP5.12□□□□□ -1.59
RNU6-880P-201ENST00000384526 CDCA7LQ96GN5 454 aa5.12□□□□□ -1.59
RNU6-880P-201ENST00000384526 ANKLE1Q8NAG6 615 aa5.11□□□□□ -1.59
RNU6-880P-201ENST00000384526 TATDN2Q93075 761 aa5.11□□□□□ -1.59
RNU6-880P-201ENST00000384526 DNAJC5Q9H3Z4 198 aa5.11□□□□□ -1.59
RNU6-880P-201ENST00000384526 NBPF26B4DH59 902 aa5.1□□□□□ -1.59
RNU6-880P-201ENST00000384526 C11orf95C9JLR9 678 aaPredicted RBP5.1□□□□□ -1.59
RNU6-880P-201ENST00000384526 PPEF1O14829 653 aaPredicted RBP5.1□□□□□ -1.59
RNU6-880P-201ENST00000384526 MAP3K7O43318 606 aa5.1□□□□□ -1.59
RNU6-880P-201ENST00000384526 PRSS12P56730 875 aa5.1□□□□□ -1.59
RNU6-880P-201ENST00000384526 DDX12PQ92771 950 aa5.1□□□□□ -1.59
RNU6-880P-201ENST00000384526 DPYSL4O14531 572 aa5.09□□□□□ -1.59
RNU6-880P-201ENST00000384526 PKD2L1Q9P0L9 805 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms