RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 ITPRIPQ8IWB1 547 aa19.16■□□□□ 0.66
SRPK1-204ENST00000373825 MPHOSPH9Q99550 1183 aa19.16■□□□□ 0.66
SRPK1-204ENST00000373825 CHMP4BQ9H444 224 aaKnown RBP19.16■□□□□ 0.66
SRPK1-204ENST00000373825 MYBBP1AQ9BQG0 1328 aaKnown RBP19.15■□□□□ 0.66
SRPK1-204ENST00000373825 KIF7Q2M1P5 1343 aa19.14■□□□□ 0.66
SRPK1-204ENST00000373825 TRERF1Q96PN7 1200 aa19.14■□□□□ 0.66
SRPK1-204ENST00000373825 BAZ1AQ9NRL2 1556 aaPredicted RBP19.14■□□□□ 0.65
SRPK1-204ENST00000373825 U2SURPO15042 1029 aaKnown RBP19.13■□□□□ 0.65
SRPK1-204ENST00000373825 CCDC7Q96M83 1385 aa19.13■□□□□ 0.65
SRPK1-204ENST00000373825 CNTLNQ9NXG0 1405 aa19.13■□□□□ 0.65
SRPK1-204ENST00000373825 VGLL3A8MV65 326 aa19.12■□□□□ 0.65
SRPK1-204ENST00000373825 IGSF3O75054 1194 aa19.12■□□□□ 0.65
SRPK1-204ENST00000373825 WDR97A6NE52 1622 aa19.12■□□□□ 0.65
SRPK1-204ENST00000373825 CENPJQ9HC77 1338 aaPredicted RBP19.12■□□□□ 0.65
SRPK1-204ENST00000373825 CHGAP10645 457 aaKnown RBP19.12■□□□□ 0.65
SRPK1-204ENST00000373825 SMG6Q86US8 1419 aaKnown RBP19.11■□□□□ 0.65
SRPK1-204ENST00000373825 CCDC66A2RUB6 948 aa19.11■□□□□ 0.65
SRPK1-204ENST00000373825 ERICH4A6NGS2 130 aa19.1■□□□□ 0.65
SRPK1-204ENST00000373825 CCDC39Q9UFE4 941 aa19.08■□□□□ 0.65
SRPK1-204ENST00000373825 NAP1L2Q9ULW6 460 aaPredicted RBP19.08■□□□□ 0.65
SRPK1-204ENST00000373825 NRDCO43847 1150 aa19.08■□□□□ 0.65
SRPK1-204ENST00000373825 SPDYE4A6NLX3 237 aa19.08■□□□□ 0.64
SRPK1-204ENST00000373825 GOLGA6L6A8MZA4 724 aa19.08■□□□□ 0.64
SRPK1-204ENST00000373825 TAOK2Q9UL54 1235 aa19.07■□□□□ 0.64
SRPK1-204ENST00000373825 ST20-MTHFSA0A0A6YYL1 179 aa19.07■□□□□ 0.64
SRPK1-204ENST00000373825 PAXIP1Q6ZW49 1069 aaPredicted RBP19.07■□□□□ 0.64
SRPK1-204ENST00000373825 PANK1Q8TE04 598 aa19.07■□□□□ 0.64
SRPK1-204ENST00000373825 SENP3Q9H4L4 574 aaPredicted RBP19.06■□□□□ 0.64
SRPK1-204ENST00000373825 RAPGEF2Q9Y4G8 1499 aa19.06■□□□□ 0.64
SRPK1-204ENST00000373825 HMGN5P82970 282 aaKnown RBP19.05■□□□□ 0.64
SRPK1-204ENST00000373825 FGD1P98174 961 aa19.05■□□□□ 0.64
SRPK1-204ENST00000373825 CGNL1Q0VF96 1302 aa19.05■□□□□ 0.64
SRPK1-204ENST00000373825 KIF15Q9NS87 1388 aa19.04■□□□□ 0.64
SRPK1-204ENST00000373825 C20orf194Q5TEA3 1177 aa19.04■□□□□ 0.64
SRPK1-204ENST00000373825 NPHP1O15259 732 aa19.03■□□□□ 0.64
SRPK1-204ENST00000373825 ISY1Q9ULR0 285 aaKnown RBP19.03■□□□□ 0.64
SRPK1-204ENST00000373825 DIAPH3Q9NSV4 1193 aa19.03■□□□□ 0.64
SRPK1-204ENST00000373825 RRP7AQ9Y3A4 280 aaKnown RBP19.03■□□□□ 0.64
SRPK1-204ENST00000373825 TSPY4P0CV99 314 aa19.03■□□□□ 0.64
SRPK1-204ENST00000373825 TSPY10P0CW01 314 aa19.03■□□□□ 0.64
SRPK1-204ENST00000373825 PNISRQ8TF01 805 aaKnown RBP19.03■□□□□ 0.64
SRPK1-204ENST00000373825 CFAP53Q96M91 514 aa19.03■□□□□ 0.64
SRPK1-204ENST00000373825 TMF1P82094 1093 aa19.02■□□□□ 0.64
SRPK1-204ENST00000373825 AAMPQ13685 434 aa19.02■□□□□ 0.64
SRPK1-204ENST00000373825 PDCL2Q8N4E4 241 aa19.02■□□□□ 0.64
SRPK1-204ENST00000373825 KCNJ4P48050 445 aa19.01■□□□□ 0.63
SRPK1-204ENST00000373825 PHF14O94880 888 aa19.01■□□□□ 0.63
SRPK1-204ENST00000373825 APAF1O14727 1248 aa19■□□□□ 0.63
SRPK1-204ENST00000373825 PRPF40AO75400 957 aaKnown RBP19■□□□□ 0.63
SRPK1-204ENST00000373825 SMC4Q9NTJ3 1288 aa19■□□□□ 0.63
SRPK1-204ENST00000373825 IFT57Q9NWB7 429 aa19■□□□□ 0.63
SRPK1-204ENST00000373825 PPP4R3BQ5MIZ7 849 aa18.99■□□□□ 0.63
SRPK1-204ENST00000373825 KIF3AQ9Y496 699 aa18.99■□□□□ 0.63
SRPK1-204ENST00000373825 PKD2Q13563 968 aa18.98■□□□□ 0.63
SRPK1-204ENST00000373825 TBC1D2Q9BYX2 928 aa18.98■□□□□ 0.63
SRPK1-204ENST00000373825 HTATSF1O43719 755 aaKnown RBP18.97■□□□□ 0.63
SRPK1-204ENST00000373825 ST18O60284 1047 aa18.97■□□□□ 0.63
SRPK1-204ENST00000373825 CHMP3Q9Y3E7 222 aa18.97■□□□□ 0.63
SRPK1-204ENST00000373825 SASS6Q6UVJ0 657 aa18.96■□□□□ 0.63
SRPK1-204ENST00000373825 ARHGAP35Q9NRY4 1499 aa18.96■□□□□ 0.63
SRPK1-204ENST00000373825 FMN1Q68DA7 1419 aa18.96■□□□□ 0.63
SRPK1-204ENST00000373825 ANKRD45Q5TZF3 282 aa18.96■□□□□ 0.63
SRPK1-204ENST00000373825 NACADO15069 1562 aa18.95■□□□□ 0.62
SRPK1-204ENST00000373825 CDCA8Q53HL2 280 aa18.95■□□□□ 0.62
SRPK1-204ENST00000373825 GOLGA6L1Q8N7Z2 621 aa18.95■□□□□ 0.62
SRPK1-204ENST00000373825 LNPKQ9C0E8 428 aa18.95■□□□□ 0.62
SRPK1-204ENST00000373825 PDZRN3Q9UPQ7 1066 aa18.94■□□□□ 0.62
SRPK1-204ENST00000373825 MCCP23508 829 aa18.94■□□□□ 0.62
SRPK1-204ENST00000373825 TEX35Q5T0J7 233 aa18.94■□□□□ 0.62
SRPK1-204ENST00000373825 CCAR2Q8N163 923 aaKnown RBP18.94■□□□□ 0.62
SRPK1-204ENST00000373825 TAF3Q5VWG9 929 aa18.93■□□□□ 0.62
SRPK1-204ENST00000373825 PANK3Q9H999 370 aa18.93■□□□□ 0.62
SRPK1-204ENST00000373825 BCAR3O75815 825 aa18.93■□□□□ 0.62
SRPK1-204ENST00000373825 SPC24Q8NBT2 197 aa18.92■□□□□ 0.62
SRPK1-204ENST00000373825 TOP2AP11388 1531 aaKnown RBP18.92■□□□□ 0.62
SRPK1-204ENST00000373825 DYNC1I1O14576 645 aa18.91■□□□□ 0.62
SRPK1-204ENST00000373825 FBLN2P98095 1184 aa18.91■□□□□ 0.62
SRPK1-204ENST00000373825 USP47Q96K76 1375 aa18.91■□□□□ 0.62
SRPK1-204ENST00000373825 NUCB2P80303 420 aa18.91■□□□□ 0.62
SRPK1-204ENST00000373825 GNL2Q13823 731 aaKnown RBP18.91■□□□□ 0.62
SRPK1-204ENST00000373825 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.9■□□□□ 0.62
SRPK1-204ENST00000373825 SMAP1Q8IYB5 467 aaPredicted RBP18.9■□□□□ 0.62
SRPK1-204ENST00000373825 ROCK2O75116 1388 aaKnown RBP18.89■□□□□ 0.62
SRPK1-204ENST00000373825 KIF16BQ96L93 1317 aa18.89■□□□□ 0.61
SRPK1-204ENST00000373825 ADAMTS8Q9UP79 889 aa18.89■□□□□ 0.61
SRPK1-204ENST00000373825 FAM177BA6PVY3 158 aa18.89■□□□□ 0.61
SRPK1-204ENST00000373825 KIF27Q86VH2 1401 aa18.88■□□□□ 0.61
SRPK1-204ENST00000373825 GPS2Q13227 327 aa18.88■□□□□ 0.61
SRPK1-204ENST00000373825 IPO8O15397 1037 aaKnown RBP18.87■□□□□ 0.61
SRPK1-204ENST00000373825 OFD1O75665 1012 aa18.87■□□□□ 0.61
SRPK1-204ENST00000373825 U2AF1L5P0DN76 240 aaPredicted RBP18.86■□□□□ 0.61
SRPK1-204ENST00000373825 U2AF1Q01081 240 aaKnown RBP eCLIP18.86■□□□□ 0.61
SRPK1-204ENST00000373825 FHAD1B1AJZ9 1412 aa18.86■□□□□ 0.61
SRPK1-204ENST00000373825 TAF7LQ5H9L4 462 aa18.86■□□□□ 0.61
SRPK1-204ENST00000373825 TNPO1Q92973 898 aaKnown RBP18.85■□□□□ 0.61
SRPK1-204ENST00000373825 PHLDB1Q86UU1 1377 aa18.85■□□□□ 0.61
SRPK1-204ENST00000373825 SYCE3A1L190 88 aa18.85■□□□□ 0.61
SRPK1-204ENST00000373825 CFDP1Q9UEE9 299 aaPredicted RBP18.85■□□□□ 0.61
SRPK1-204ENST00000373825 MORC1Q86VD1 984 aa18.85■□□□□ 0.61
SRPK1-204ENST00000373825 SKIDA1Q1XH10 827 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms