RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 PCDHGA10Q9Y5H3 936 aa6.12□□□□□ -1.43
MIR539-201ENST00000365690 ZNF787Q6DD87 383 aa6.11□□□□□ -1.43
MIR539-201ENST00000365690 KIAA1468Q9P260 1216 aa6.11□□□□□ -1.43
MIR539-201ENST00000365690 NCKAP5LQ9HCH0 1330 aa6.1□□□□□ -1.43
MIR539-201ENST00000365690 PRKD2Q9BZL6 878 aa6.1□□□□□ -1.43
MIR539-201ENST00000365690 SEPT9Q9UHD8 586 aaPredicted RBP6.09□□□□□ -1.43
MIR539-201ENST00000365690 TJAP1Q5JTD0 557 aa6.07□□□□□ -1.44
MIR539-201ENST00000365690 TSR3Q9UJK0 312 aaKnown RBP6.06□□□□□ -1.44
MIR539-201ENST00000365690 HPS5Q9UPZ3 1129 aa6.06□□□□□ -1.44
MIR539-201ENST00000365690 NKX1-1Q15270 411 aaPredicted RBP6.05□□□□□ -1.44
MIR539-201ENST00000365690 EMILIN3Q9NT22 766 aa6.05□□□□□ -1.44
MIR539-201ENST00000365690 ONECUT3O60422 494 aaPredicted RBP6.04□□□□□ -1.44
MIR539-201ENST00000365690 PPP1R18Q6NYC8 613 aa6.04□□□□□ -1.44
MIR539-201ENST00000365690 HS6ST3Q8IZP7 471 aa6.04□□□□□ -1.44
MIR539-201ENST00000365690 V9GY48 417 aaPredicted RBP6.04□□□□□ -1.44
MIR539-201ENST00000365690 POTECB2RU33 542 aa6.03□□□□□ -1.44
MIR539-201ENST00000365690 FAM98CQ17RN3 349 aaKnown RBP6.03□□□□□ -1.44
MIR539-201ENST00000365690 LCE2AQ5TA79 106 aaPredicted RBP6.03□□□□□ -1.44
MIR539-201ENST00000365690 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.03□□□□□ -1.44
MIR539-201ENST00000365690 TRIM6-TRIM34B2RNG4 842 aa6.02□□□□□ -1.45
MIR539-201ENST00000365690 TYW1BQ6NUM6 668 aa6.02□□□□□ -1.45
MIR539-201ENST00000365690 LRCH3Q96II8 777 aa6.01□□□□□ -1.45
MIR539-201ENST00000365690 PDZRN3Q9UPQ7 1066 aa6.01□□□□□ -1.45
MIR539-201ENST00000365690 PHF14O94880 888 aa6□□□□□ -1.45
MIR539-201ENST00000365690 MAP3K9P80192 1104 aa6□□□□□ -1.45
MIR539-201ENST00000365690 C6orf132Q5T0Z8 1188 aa6□□□□□ -1.45
MIR539-201ENST00000365690 TRIM67Q6ZTA4 783 aa6□□□□□ -1.45
MIR539-201ENST00000365690 ZNF516Q92618 1163 aa6□□□□□ -1.45
MIR539-201ENST00000365690 PDE4AP27815 886 aa5.99□□□□□ -1.45
MIR539-201ENST00000365690 FBXW7Q969H0 707 aa5.99□□□□□ -1.45
MIR539-201ENST00000365690 MTRQ99707 1265 aa5.99□□□□□ -1.45
MIR539-201ENST00000365690 MFSD10Q14728 455 aa5.98□□□□□ -1.45
MIR539-201ENST00000365690 NKX2-3Q8TAU0 364 aa5.98□□□□□ -1.45
MIR539-201ENST00000365690 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.98□□□□□ -1.45
MIR539-201ENST00000365690 C3orf80F5H4A9 247 aa5.97□□□□□ -1.45
MIR539-201ENST00000365690 EMID1Q96A84 441 aaPredicted RBP5.97□□□□□ -1.45
MIR539-201ENST00000365690 LARP6Q9BRS8 491 aaKnown RBP5.97□□□□□ -1.45
MIR539-201ENST00000365690 DNAJC5Q9H3Z4 198 aa5.97□□□□□ -1.45
MIR539-201ENST00000365690 TSKSQ9UJT2 592 aa5.97□□□□□ -1.45
MIR539-201ENST00000365690 IL21Q9HBE4 155 aa5.96□□□□□ -1.46
MIR539-201ENST00000365690 PPP4CP60510 307 aa5.95□□□□□ -1.46
MIR539-201ENST00000365690 MYT1Q01538 1121 aa5.95□□□□□ -1.46
MIR539-201ENST00000365690 DDX27Q96GQ7 796 aaKnown RBP5.95□□□□□ -1.46
MIR539-201ENST00000365690 SAMD7Q7Z3H4 446 aa5.94□□□□□ -1.46
MIR539-201ENST00000365690 FAM198AQ9UFP1 575 aa5.94□□□□□ -1.46
MIR539-201ENST00000365690 SMAPO00193 183 aa5.92□□□□□ -1.46
MIR539-201ENST00000365690 CHGAP10645 457 aaKnown RBP5.92□□□□□ -1.46
MIR539-201ENST00000365690 APLP1P51693 650 aa5.92□□□□□ -1.46
MIR539-201ENST00000365690 TREML4Q6UXN2 200 aa5.92□□□□□ -1.46
MIR539-201ENST00000365690 RBM33Q96EV2 1170 aaKnown RBP5.92□□□□□ -1.46
MIR539-201ENST00000365690 EPAS1Q99814 870 aa5.92□□□□□ -1.46
MIR539-201ENST00000365690 TSR1Q2NL82 804 aaKnown RBP5.9□□□□□ -1.46
MIR539-201ENST00000365690 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
MIR539-201ENST00000365690 GTPBP6O43824 516 aaPredicted RBP5.88□□□□□ -1.47
MIR539-201ENST00000365690 PACS2Q86VP3 889 aa5.88□□□□□ -1.47
MIR539-201ENST00000365690 KRTAP4-6Q9BYQ5 205 aa5.88□□□□□ -1.47
MIR539-201ENST00000365690 DGAT1O75907 488 aa5.87□□□□□ -1.47
MIR539-201ENST00000365690 CADPS2Q86UW7 1296 aa5.87□□□□□ -1.47
MIR539-201ENST00000365690 DDX12PQ92771 950 aa5.87□□□□□ -1.47
MIR539-201ENST00000365690 DPYSL4O14531 572 aa5.86□□□□□ -1.47
MIR539-201ENST00000365690 PRIM1P49642 420 aaKnown RBP5.86□□□□□ -1.47
MIR539-201ENST00000365690 CAMK2BQ13554 666 aa5.86□□□□□ -1.47
MIR539-201ENST00000365690 ST8SIA5O15466 376 aa5.85□□□□□ -1.47
MIR539-201ENST00000365690 EN1Q05925 392 aaPredicted RBP5.85□□□□□ -1.47
MIR539-201ENST00000365690 PKDCCQ504Y2 493 aa5.85□□□□□ -1.47
MIR539-201ENST00000365690 CDCA7LQ96GN5 454 aa5.85□□□□□ -1.47
MIR539-201ENST00000365690 TMUB1Q9BVT8 246 aa5.85□□□□□ -1.47
MIR539-201ENST00000365690 RNF223E7ERA6 249 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 SLC19A1P41440 591 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 COPS2P61201 443 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 PRR20EP86478 221 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 PRR20CP86479 221 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 PRR20DP86480 221 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 PRR20BP86481 221 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 PRR20AP86496 221 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 LCE2CQ5TA81 110 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 SPRYD7Q5W111 196 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 TATDN2Q93075 761 aa5.84□□□□□ -1.47
MIR539-201ENST00000365690 RYDENQ9NUL5 291 aaKnown RBP5.84□□□□□ -1.47
MIR539-201ENST00000365690 GDF9O60383 454 aa5.83□□□□□ -1.48
MIR539-201ENST00000365690 PRSS12P56730 875 aa5.83□□□□□ -1.48
MIR539-201ENST00000365690 AAASQ9NRG9 546 aa5.83□□□□□ -1.48
MIR539-201ENST00000365690 ZPR1O75312 459 aa5.82□□□□□ -1.48
MIR539-201ENST00000365690 LIAT1Q6ZQX7 453 aa5.82□□□□□ -1.48
MIR539-201ENST00000365690 ZNF598Q86UK7 904 aaKnown RBP5.82□□□□□ -1.48
MIR539-201ENST00000365690 DACH1Q9UI36 760 aa5.82□□□□□ -1.48
MIR539-201ENST00000365690 PNMA3Q9UL41 463 aa5.81□□□□□ -1.48
MIR539-201ENST00000365690 FAM187AA6NFU0 413 aa5.8□□□□□ -1.48
MIR539-201ENST00000365690 MAP3K7O43318 606 aa5.8□□□□□ -1.48
MIR539-201ENST00000365690 GGCXP38435 758 aa5.8□□□□□ -1.48
MIR539-201ENST00000365690 NFX1Q12986 1120 aaKnown RBP5.8□□□□□ -1.48
MIR539-201ENST00000365690 NBR1Q14596 966 aa5.8□□□□□ -1.48
MIR539-201ENST00000365690 TNFRSF10AO00220 468 aa5.79□□□□□ -1.48
MIR539-201ENST00000365690 PPEF1O14829 653 aaPredicted RBP5.79□□□□□ -1.48
MIR539-201ENST00000365690 STK17AQ9UEE5 414 aa5.79□□□□□ -1.48
MIR539-201ENST00000365690 WIPF1O43516 503 aa5.78□□□□□ -1.48
MIR539-201ENST00000365690 RNF40O75150 1001 aa5.78□□□□□ -1.48
MIR539-201ENST00000365690 WFS1O76024 890 aa5.78□□□□□ -1.48
MIR539-201ENST00000365690 NUDT18Q6ZVK8 323 aa5.78□□□□□ -1.48
MIR539-201ENST00000365690 NBPF26B4DH59 902 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms