RNA–Protein interactions for RNA: ENST00000362944.1

RNU6-1260P-201, Transcript of RNA, U6 small nuclear 1260, pseudogene, humanhuman

BASIC

Gene RNU6-1260P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1260P-201ENST00000362944 PCDHGA10Q9Y5H3 936 aa2.84□□□□□ -1.95
RNU6-1260P-201ENST00000362944 NRG2O14511 850 aaPredicted RBP2.83□□□□□ -1.96
RNU6-1260P-201ENST00000362944 CRISPLD2Q9H0B8 497 aa2.83□□□□□ -1.96
RNU6-1260P-201ENST00000362944 HPS5Q9UPZ3 1129 aa2.83□□□□□ -1.96
RNU6-1260P-201ENST00000362944 NCKAP5LQ9HCH0 1330 aa2.83□□□□□ -1.96
RNU6-1260P-201ENST00000362944 POTECB2RU33 542 aa2.82□□□□□ -1.96
RNU6-1260P-201ENST00000362944 PPP1R18Q6NYC8 613 aa2.82□□□□□ -1.96
RNU6-1260P-201ENST00000362944 NYAP1Q6ZVC0 841 aa2.82□□□□□ -1.96
RNU6-1260P-201ENST00000362944 LAPTM4BQ86VI4 370 aa2.82□□□□□ -1.96
RNU6-1260P-201ENST00000362944 PDZRN3Q9UPQ7 1066 aa2.82□□□□□ -1.96
RNU6-1260P-201ENST00000362944 MAP3K9P80192 1104 aa2.81□□□□□ -1.96
RNU6-1260P-201ENST00000362944 NKX1-1Q15270 411 aaPredicted RBP2.81□□□□□ -1.96
RNU6-1260P-201ENST00000362944 TJAP1Q5JTD0 557 aa2.81□□□□□ -1.96
RNU6-1260P-201ENST00000362944 ZNF516Q92618 1163 aa2.81□□□□□ -1.96
RNU6-1260P-201ENST00000362944 LRCH3Q96II8 777 aa2.81□□□□□ -1.96
RNU6-1260P-201ENST00000362944 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.81□□□□□ -1.96
RNU6-1260P-201ENST00000362944 TSR3Q9UJK0 312 aaKnown RBP2.81□□□□□ -1.96
RNU6-1260P-201ENST00000362944 FAM98CQ17RN3 349 aaKnown RBP2.8□□□□□ -1.96
RNU6-1260P-201ENST00000362944 NKX2-3Q8TAU0 364 aa2.8□□□□□ -1.96
RNU6-1260P-201ENST00000362944 RBM33Q96EV2 1170 aaKnown RBP2.8□□□□□ -1.96
RNU6-1260P-201ENST00000362944 LARP6Q9BRS8 491 aaKnown RBP2.8□□□□□ -1.96
RNU6-1260P-201ENST00000362944 EMILIN3Q9NT22 766 aa2.8□□□□□ -1.96
RNU6-1260P-201ENST00000362944 TRIM6-TRIM34B2RNG4 842 aa2.79□□□□□ -1.96
RNU6-1260P-201ENST00000362944 CHGAP10645 457 aaKnown RBP2.79□□□□□ -1.96
RNU6-1260P-201ENST00000362944 PPP4CP60510 307 aa2.79□□□□□ -1.96
RNU6-1260P-201ENST00000362944 C6orf132Q5T0Z8 1188 aa2.79□□□□□ -1.96
RNU6-1260P-201ENST00000362944 TYW1BQ6NUM6 668 aa2.79□□□□□ -1.96
RNU6-1260P-201ENST00000362944 HS6ST3Q8IZP7 471 aa2.79□□□□□ -1.96
RNU6-1260P-201ENST00000362944 MTRQ99707 1265 aa2.79□□□□□ -1.96
RNU6-1260P-201ENST00000362944 C3orf80F5H4A9 247 aa2.78□□□□□ -1.96
RNU6-1260P-201ENST00000362944 SMAPO00193 183 aa2.78□□□□□ -1.96
RNU6-1260P-201ENST00000362944 PDE4AP27815 886 aa2.78□□□□□ -1.96
RNU6-1260P-201ENST00000362944 SAMD7Q7Z3H4 446 aa2.78□□□□□ -1.96
RNU6-1260P-201ENST00000362944 FBXW7Q969H0 707 aa2.78□□□□□ -1.96
RNU6-1260P-201ENST00000362944 DDX27Q96GQ7 796 aaKnown RBP2.78□□□□□ -1.96
RNU6-1260P-201ENST00000362944 TSKSQ9UJT2 592 aa2.78□□□□□ -1.96
RNU6-1260P-201ENST00000362944 V9GY48 417 aaPredicted RBP2.78□□□□□ -1.96
RNU6-1260P-201ENST00000362944 PHF14O94880 888 aa2.77□□□□□ -1.97
RNU6-1260P-201ENST00000362944 TRIM67Q6ZTA4 783 aa2.77□□□□□ -1.97
RNU6-1260P-201ENST00000362944 DDX12PQ92771 950 aa2.77□□□□□ -1.97
RNU6-1260P-201ENST00000362944 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.77□□□□□ -1.97
RNU6-1260P-201ENST00000362944 ONECUT3O60422 494 aaPredicted RBP2.76□□□□□ -1.97
RNU6-1260P-201ENST00000362944 RNF40O75150 1001 aa2.76□□□□□ -1.97
RNU6-1260P-201ENST00000362944 APLP1P51693 650 aa2.76□□□□□ -1.97
RNU6-1260P-201ENST00000362944 MYT1Q01538 1121 aa2.76□□□□□ -1.97
RNU6-1260P-201ENST00000362944 TSR1Q2NL82 804 aaKnown RBP2.76□□□□□ -1.97
RNU6-1260P-201ENST00000362944 IL21Q9HBE4 155 aa2.76□□□□□ -1.97
RNU6-1260P-201ENST00000362944 DPYSL4O14531 572 aa2.75□□□□□ -1.97
RNU6-1260P-201ENST00000362944 COPS2P61201 443 aa2.75□□□□□ -1.97
RNU6-1260P-201ENST00000362944 PKDCCQ504Y2 493 aa2.75□□□□□ -1.97
RNU6-1260P-201ENST00000362944 LCE2AQ5TA79 106 aaPredicted RBP2.75□□□□□ -1.97
RNU6-1260P-201ENST00000362944 EMID1Q96A84 441 aaPredicted RBP2.75□□□□□ -1.97
RNU6-1260P-201ENST00000362944 FAM198AQ9UFP1 575 aa2.75□□□□□ -1.97
RNU6-1260P-201ENST00000362944 ST8SIA5O15466 376 aa2.74□□□□□ -1.97
RNU6-1260P-201ENST00000362944 MFSD10Q14728 455 aa2.74□□□□□ -1.97
RNU6-1260P-201ENST00000362944 TREML4Q6UXN2 200 aa2.74□□□□□ -1.97
RNU6-1260P-201ENST00000362944 CADPS2Q86UW7 1296 aa2.74□□□□□ -1.97
RNU6-1260P-201ENST00000362944 PACS2Q86VP3 889 aa2.74□□□□□ -1.97
RNU6-1260P-201ENST00000362944 TNFRSF10AO00220 468 aa2.73□□□□□ -1.97
RNU6-1260P-201ENST00000362944 MAP3K7O43318 606 aa2.73□□□□□ -1.97
RNU6-1260P-201ENST00000362944 SLC19A1P41440 591 aa2.73□□□□□ -1.97
RNU6-1260P-201ENST00000362944 NBR1Q14596 966 aa2.73□□□□□ -1.97
RNU6-1260P-201ENST00000362944 CDCA7LQ96GN5 454 aa2.73□□□□□ -1.97
RNU6-1260P-201ENST00000362944 EPAS1Q99814 870 aa2.73□□□□□ -1.97
RNU6-1260P-201ENST00000362944 FAM187AA6NFU0 413 aa2.72□□□□□ -1.97
RNU6-1260P-201ENST00000362944 RNF223E7ERA6 249 aa2.72□□□□□ -1.97
RNU6-1260P-201ENST00000362944 PPEF1O14829 653 aaPredicted RBP2.72□□□□□ -1.97
RNU6-1260P-201ENST00000362944 GTPBP6O43824 516 aaPredicted RBP2.72□□□□□ -1.97
RNU6-1260P-201ENST00000362944 PRIM1P49642 420 aaKnown RBP2.72□□□□□ -1.97
RNU6-1260P-201ENST00000362944 EN1Q05925 392 aaPredicted RBP2.72□□□□□ -1.97
RNU6-1260P-201ENST00000362944 TATDN2Q93075 761 aa2.72□□□□□ -1.97
RNU6-1260P-201ENST00000362944 DACH1Q9UI36 760 aa2.72□□□□□ -1.97
RNU6-1260P-201ENST00000362944 TLL1O43897 1013 aa2.71□□□□□ -1.98
RNU6-1260P-201ENST00000362944 ZPR1O75312 459 aa2.71□□□□□ -1.98
RNU6-1260P-201ENST00000362944 DGAT1O75907 488 aa2.71□□□□□ -1.98
RNU6-1260P-201ENST00000362944 GGCXP38435 758 aa2.71□□□□□ -1.98
RNU6-1260P-201ENST00000362944 NUDT18Q6ZVK8 323 aa2.71□□□□□ -1.98
RNU6-1260P-201ENST00000362944 DNAJC5Q9H3Z4 198 aa2.71□□□□□ -1.98
RNU6-1260P-201ENST00000362944 AAASQ9NRG9 546 aa2.71□□□□□ -1.98
RNU6-1260P-201ENST00000362944 RYDENQ9NUL5 291 aaKnown RBP2.71□□□□□ -1.98
RNU6-1260P-201ENST00000362944 PNMA3Q9UL41 463 aa2.71□□□□□ -1.98
RNU6-1260P-201ENST00000362944 WFS1O76024 890 aa2.7□□□□□ -1.98
RNU6-1260P-201ENST00000362944 PRSS12P56730 875 aa2.7□□□□□ -1.98
RNU6-1260P-201ENST00000362944 LCE2CQ5TA81 110 aa2.7□□□□□ -1.98
RNU6-1260P-201ENST00000362944 ZNF697Q5TEC3 545 aa2.7□□□□□ -1.98
RNU6-1260P-201ENST00000362944 SPRYD7Q5W111 196 aa2.7□□□□□ -1.98
RNU6-1260P-201ENST00000362944 LIAT1Q6ZQX7 453 aa2.7□□□□□ -1.98
RNU6-1260P-201ENST00000362944 TMUB1Q9BVT8 246 aa2.7□□□□□ -1.98
RNU6-1260P-201ENST00000362944 LOC100996750A0A140TA64 210 aa2.69□□□□□ -1.98
RNU6-1260P-201ENST00000362944 GDF9O60383 454 aa2.69□□□□□ -1.98
RNU6-1260P-201ENST00000362944 PRR20EP86478 221 aa2.69□□□□□ -1.98
RNU6-1260P-201ENST00000362944 PRR20CP86479 221 aa2.69□□□□□ -1.98
RNU6-1260P-201ENST00000362944 PRR20DP86480 221 aa2.69□□□□□ -1.98
RNU6-1260P-201ENST00000362944 PRR20BP86481 221 aa2.69□□□□□ -1.98
RNU6-1260P-201ENST00000362944 PRR20AP86496 221 aa2.69□□□□□ -1.98
RNU6-1260P-201ENST00000362944 NFX1Q12986 1120 aaKnown RBP2.69□□□□□ -1.98
RNU6-1260P-201ENST00000362944 CAMK2BQ13554 666 aa2.69□□□□□ -1.98
RNU6-1260P-201ENST00000362944 SWT1Q5T5J6 900 aaKnown RBP2.69□□□□□ -1.98
RNU6-1260P-201ENST00000362944 BLOC1S3Q6QNY0 202 aa2.69□□□□□ -1.98
RNU6-1260P-201ENST00000362944 ZNF598Q86UK7 904 aaKnown RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms