RNA–Protein interactions for RNA: ENST00000362409.1

RNU6-661P-201, Transcript of RNA, U6 small nuclear 661, pseudogene, humanhuman

BASIC

Gene RNU6-661P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-661P-201ENST00000362409 ZFRQ96KR1 1074 aaKnown RBP4.26□□□□□ -1.73
RNU6-661P-201ENST00000362409 PCDHGA10Q9Y5H3 936 aa4.26□□□□□ -1.73
RNU6-661P-201ENST00000362409 HS6ST3Q8IZP7 471 aa4.25□□□□□ -1.73
RNU6-661P-201ENST00000362409 KIAA1468Q9P260 1216 aa4.25□□□□□ -1.73
RNU6-661P-201ENST00000362409 LAPTM4AQ15012 233 aa4.23□□□□□ -1.73
RNU6-661P-201ENST00000362409 LAPTM4BQ86VI4 370 aa4.23□□□□□ -1.73
RNU6-661P-201ENST00000362409 PRKD2Q9BZL6 878 aa4.23□□□□□ -1.73
RNU6-661P-201ENST00000362409 EMILIN3Q9NT22 766 aa4.23□□□□□ -1.73
RNU6-661P-201ENST00000362409 HPS5Q9UPZ3 1129 aa4.23□□□□□ -1.73
RNU6-661P-201ENST00000362409 MAP3K9P80192 1104 aa4.22□□□□□ -1.73
RNU6-661P-201ENST00000362409 NYAP1Q6ZVC0 841 aa4.22□□□□□ -1.73
RNU6-661P-201ENST00000362409 ZNF775Q96BV0 537 aaPredicted RBP4.22□□□□□ -1.73
RNU6-661P-201ENST00000362409 NRG2O14511 850 aaPredicted RBP4.21□□□□□ -1.74
RNU6-661P-201ENST00000362409 CHGAP10645 457 aaKnown RBP4.21□□□□□ -1.74
RNU6-661P-201ENST00000362409 ZNF787Q6DD87 383 aa4.21□□□□□ -1.74
RNU6-661P-201ENST00000362409 TSR3Q9UJK0 312 aaKnown RBP4.21□□□□□ -1.74
RNU6-661P-201ENST00000362409 PDE4AP27815 886 aa4.2□□□□□ -1.74
RNU6-661P-201ENST00000362409 TJAP1Q5JTD0 557 aa4.2□□□□□ -1.74
RNU6-661P-201ENST00000362409 TYW1BQ6NUM6 668 aa4.2□□□□□ -1.74
RNU6-661P-201ENST00000362409 LRCH3Q96II8 777 aa4.2□□□□□ -1.74
RNU6-661P-201ENST00000362409 LARP6Q9BRS8 491 aaKnown RBP4.2□□□□□ -1.74
RNU6-661P-201ENST00000362409 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.2□□□□□ -1.74
RNU6-661P-201ENST00000362409 TRIM6-TRIM34B2RNG4 842 aa4.19□□□□□ -1.74
RNU6-661P-201ENST00000362409 FAM98CQ17RN3 349 aaKnown RBP4.19□□□□□ -1.74
RNU6-661P-201ENST00000362409 C6orf132Q5T0Z8 1188 aa4.19□□□□□ -1.74
RNU6-661P-201ENST00000362409 PPP1R18Q6NYC8 613 aa4.19□□□□□ -1.74
RNU6-661P-201ENST00000362409 DDX27Q96GQ7 796 aaKnown RBP4.19□□□□□ -1.74
RNU6-661P-201ENST00000362409 PHF14O94880 888 aa4.18□□□□□ -1.74
RNU6-661P-201ENST00000362409 ZNF516Q92618 1163 aa4.18□□□□□ -1.74
RNU6-661P-201ENST00000362409 FBXW7Q969H0 707 aa4.18□□□□□ -1.74
RNU6-661P-201ENST00000362409 RBM33Q96EV2 1170 aaKnown RBP4.18□□□□□ -1.74
RNU6-661P-201ENST00000362409 SMAPO00193 183 aa4.17□□□□□ -1.74
RNU6-661P-201ENST00000362409 MFSD10Q14728 455 aa4.17□□□□□ -1.74
RNU6-661P-201ENST00000362409 MTRQ99707 1265 aa4.17□□□□□ -1.74
RNU6-661P-201ENST00000362409 TSKSQ9UJT2 592 aa4.17□□□□□ -1.74
RNU6-661P-201ENST00000362409 PDZRN3Q9UPQ7 1066 aa4.17□□□□□ -1.74
RNU6-661P-201ENST00000362409 ONECUT3O60422 494 aaPredicted RBP4.16□□□□□ -1.74
RNU6-661P-201ENST00000362409 NKX2-3Q8TAU0 364 aa4.16□□□□□ -1.74
RNU6-661P-201ENST00000362409 POTECB2RU33 542 aa4.15□□□□□ -1.75
RNU6-661P-201ENST00000362409 C3orf80F5H4A9 247 aa4.15□□□□□ -1.75
RNU6-661P-201ENST00000362409 PPP4CP60510 307 aa4.15□□□□□ -1.75
RNU6-661P-201ENST00000362409 SAMD7Q7Z3H4 446 aa4.15□□□□□ -1.75
RNU6-661P-201ENST00000362409 CADPS2Q86UW7 1296 aa4.15□□□□□ -1.75
RNU6-661P-201ENST00000362409 V9GY48 417 aaPredicted RBP4.15□□□□□ -1.75
RNU6-661P-201ENST00000362409 TSR1Q2NL82 804 aaKnown RBP4.14□□□□□ -1.75
RNU6-661P-201ENST00000362409 TRIM67Q6ZTA4 783 aa4.14□□□□□ -1.75
RNU6-661P-201ENST00000362409 IL21Q9HBE4 155 aa4.14□□□□□ -1.75
RNU6-661P-201ENST00000362409 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.14□□□□□ -1.75
RNU6-661P-201ENST00000362409 FAM198AQ9UFP1 575 aa4.14□□□□□ -1.75
RNU6-661P-201ENST00000362409 DPYSL4O14531 572 aa4.13□□□□□ -1.75
RNU6-661P-201ENST00000362409 DDX12PQ92771 950 aa4.13□□□□□ -1.75
RNU6-661P-201ENST00000362409 EPAS1Q99814 870 aa4.13□□□□□ -1.75
RNU6-661P-201ENST00000362409 CCDC180Q9P1Z9 1646 aa4.13□□□□□ -1.75
RNU6-661P-201ENST00000362409 GTPBP6O43824 516 aaPredicted RBP4.12□□□□□ -1.75
RNU6-661P-201ENST00000362409 SLC24A1O60721 1099 aa4.12□□□□□ -1.75
RNU6-661P-201ENST00000362409 APLP1P51693 650 aa4.12□□□□□ -1.75
RNU6-661P-201ENST00000362409 RNF40O75150 1001 aa4.11□□□□□ -1.75
RNU6-661P-201ENST00000362409 EMID1Q96A84 441 aaPredicted RBP4.11□□□□□ -1.75
RNU6-661P-201ENST00000362409 RYDENQ9NUL5 291 aaKnown RBP4.11□□□□□ -1.75
RNU6-661P-201ENST00000362409 MAP3K7O43318 606 aa4.1□□□□□ -1.75
RNU6-661P-201ENST00000362409 PRIM1P49642 420 aaKnown RBP4.1□□□□□ -1.75
RNU6-661P-201ENST00000362409 COPS2P61201 443 aa4.1□□□□□ -1.75
RNU6-661P-201ENST00000362409 MYT1Q01538 1121 aa4.1□□□□□ -1.75
RNU6-661P-201ENST00000362409 EN1Q05925 392 aaPredicted RBP4.1□□□□□ -1.75
RNU6-661P-201ENST00000362409 NBR1Q14596 966 aa4.1□□□□□ -1.75
RNU6-661P-201ENST00000362409 PACS2Q86VP3 889 aa4.1□□□□□ -1.75
RNU6-661P-201ENST00000362409 CAMK2BQ13554 666 aa4.09□□□□□ -1.75
RNU6-661P-201ENST00000362409 CDCA7LQ96GN5 454 aa4.09□□□□□ -1.75
RNU6-661P-201ENST00000362409 LCE2AQ5TA79 106 aaPredicted RBP4.08□□□□□ -1.76
RNU6-661P-201ENST00000362409 PNMA3Q9UL41 463 aa4.08□□□□□ -1.76
RNU6-661P-201ENST00000362409 ST8SIA5O15466 376 aa4.07□□□□□ -1.76
RNU6-661P-201ENST00000362409 PRSS12P56730 875 aa4.07□□□□□ -1.76
RNU6-661P-201ENST00000362409 PKDCCQ504Y2 493 aa4.07□□□□□ -1.76
RNU6-661P-201ENST00000362409 TATDN2Q93075 761 aa4.07□□□□□ -1.76
RNU6-661P-201ENST00000362409 RB1CC1Q8TDY2 1594 aa4.06□□□□□ -1.76
RNU6-661P-201ENST00000362409 SLC19A1P41440 591 aa4.06□□□□□ -1.76
RNU6-661P-201ENST00000362409 TREML4Q6UXN2 200 aa4.06□□□□□ -1.76
RNU6-661P-201ENST00000362409 CDHR5Q9HBB8 845 aa4.06□□□□□ -1.76
RNU6-661P-201ENST00000362409 BICRAQ9NZM4 1560 aa4.06□□□□□ -1.76
RNU6-661P-201ENST00000362409 CECR2Q9BXF3 1484 aa4.05□□□□□ -1.76
RNU6-661P-201ENST00000362409 FAM187AA6NFU0 413 aa4.05□□□□□ -1.76
RNU6-661P-201ENST00000362409 NBPF26B4DH59 902 aa4.05□□□□□ -1.76
RNU6-661P-201ENST00000362409 RNF223E7ERA6 249 aa4.05□□□□□ -1.76
RNU6-661P-201ENST00000362409 TNFRSF10AO00220 468 aa4.05□□□□□ -1.76
RNU6-661P-201ENST00000362409 PPEF1O14829 653 aaPredicted RBP4.05□□□□□ -1.76
RNU6-661P-201ENST00000362409 TLL1O43897 1013 aa4.05□□□□□ -1.76
RNU6-661P-201ENST00000362409 GGCXP38435 758 aa4.05□□□□□ -1.76
RNU6-661P-201ENST00000362409 NUDT18Q6ZVK8 323 aa4.05□□□□□ -1.76
RNU6-661P-201ENST00000362409 ZPR1O75312 459 aa4.04□□□□□ -1.76
RNU6-661P-201ENST00000362409 DGAT1O75907 488 aa4.04□□□□□ -1.76
RNU6-661P-201ENST00000362409 SWT1Q5T5J6 900 aaKnown RBP4.04□□□□□ -1.76
RNU6-661P-201ENST00000362409 SPRYD7Q5W111 196 aa4.04□□□□□ -1.76
RNU6-661P-201ENST00000362409 LIAT1Q6ZQX7 453 aa4.04□□□□□ -1.76
RNU6-661P-201ENST00000362409 PDIA6Q15084 440 aa4.03□□□□□ -1.76
RNU6-661P-201ENST00000362409 BLOC1S3Q6QNY0 202 aa4.03□□□□□ -1.76
RNU6-661P-201ENST00000362409 TMUB1Q9BVT8 246 aa4.03□□□□□ -1.76
RNU6-661P-201ENST00000362409 GDF9O60383 454 aa4.02□□□□□ -1.77
RNU6-661P-201ENST00000362409 PRR20EP86478 221 aa4.02□□□□□ -1.77
RNU6-661P-201ENST00000362409 PRR20CP86479 221 aa4.02□□□□□ -1.77
RNU6-661P-201ENST00000362409 PRR20DP86480 221 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms